Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g01548 | ATGGATCCTAAAACCTCATCAACAACAAAGCAGCCCCAAGAAGAAGTGGTACCCAACTTTTTTAAGCTCTCACAAGAAGAAGCAGCAGAAGAAGAAGCAATCATGGGTGAAAACAAACCAGCTGAAATCAAAGATTTTCAAATAGCAATTGCAGAGAAAGAAGAAGGAAAAAAACAGTTAGCCCCCAAAAGAAGCTCCAACAAAGACCGTCACACCAAAGTTGAAGGCAGAGGCCGAAGAATCCGTATGCCAGCTCTATGTGCTGCTAGGATTTTTCAATTGACCAGAGAATTGGATCATAAATCCGACGGCGAAACTATCCAGTGGTTGCTACAGCAGGCGGAGCCGTCTATAATCGCCGCCACAGGCACCGGAACCATTCCTGCTTCTGCTCTAGCGGCGGCAGCTGGTTCTGTTTCACAACAGGGTGCTTCTTTGTCGGCCGGATTGCATCAAAAGTTGGAGGAATTAGGAGGTGGGGGGTCCAGTAGGGCCAATTGGGGGCGACCCCATTTGGCCGCCACTCCCACTGCCCTTTGGCCCTCATCCGTCACTGGCTTTGGTTTTCAGTCTTCGACTGCCGCTGCTGCTGTTGCTGCTCAATCAGCTACTAATTTACCTAATGAAACTTCAAATTACTTTCACAAACTTGGTTTCCCACCTTTTGATTTAACCCCCACCAACATGGGTCCTATGAGTTTCACCTCCATTTTAGGTGCAAACACTCAACAATTGCCTGGTTTGGAGCTTGGATTGTCCCAAGATGGTCATATCGGGGTCATAAATCCTCAAGCTCTCAACCAAATTTACCAACAGATGGGACAACCTAGAGTTCATCAACATCACCACCAGCAACCTCCTGCTAAGGATGATTCTCAAGATTCAGCCTAG | 891 | 47.36 | MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEEAIMGENKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTALWPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVINPQALNQIYQQMGQPRVHQHHHQQPPAKDDSQDSA* | 297 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 17303644 | 17304534 | + | Chy6G120760.1 | Chy06g01548 | 229257 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g01548 | 296 | MobiDBLite | consensus disorder prediction | 53 | 77 | - | - | |
Chy06g01548 | 296 | MobiDBLite | consensus disorder prediction | 274 | 296 | - | - | |
Chy06g01548 | 296 | Pfam | TCP family transcription factor | 66 | 156 | IPR017887 | - | |
Chy06g01548 | 296 | ProSiteProfiles | TCP domain profile. | 67 | 121 | IPR017887 | - | |
Chy06g01548 | 296 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 37 | 295 | IPR005333 | GO:0003700 | |
Chy06g01548 | 296 | PANTHER | TRANSCRIPTION FACTOR TCP20-LIKE | 37 | 295 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g01548 | Chy-Chr6:17303644 | Chy12g01554 | Chy-Chr12:19166908 | 1.60E-37 | dispersed | |
Chy06g01548 | Chy-Chr6:17303644 | Chy02g02504 | Chy-Chr2:28485684 | 1.97E-37 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18192 | PF03634 | TCP | 3.30E-30 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g01548 | - | - | csv:101222902 | 548.51 |