Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01548 ATGGATCCTAAAACCTCATCAACAACAAAGCAGCCCCAAGAAGAAGTGGTACCCAACTTTTTTAAGCTCTCACAAGAAGAAGCAGCAGAAGAAGAAGCAATCATGGGTGAAAACAAACCAGCTGAAATCAAAGATTTTCAAATAGCAATTGCAGAGAAAGAAGAAGGAAAAAAACAGTTAGCCCCCAAAAGAAGCTCCAACAAAGACCGTCACACCAAAGTTGAAGGCAGAGGCCGAAGAATCCGTATGCCAGCTCTATGTGCTGCTAGGATTTTTCAATTGACCAGAGAATTGGATCATAAATCCGACGGCGAAACTATCCAGTGGTTGCTACAGCAGGCGGAGCCGTCTATAATCGCCGCCACAGGCACCGGAACCATTCCTGCTTCTGCTCTAGCGGCGGCAGCTGGTTCTGTTTCACAACAGGGTGCTTCTTTGTCGGCCGGATTGCATCAAAAGTTGGAGGAATTAGGAGGTGGGGGGTCCAGTAGGGCCAATTGGGGGCGACCCCATTTGGCCGCCACTCCCACTGCCCTTTGGCCCTCATCCGTCACTGGCTTTGGTTTTCAGTCTTCGACTGCCGCTGCTGCTGTTGCTGCTCAATCAGCTACTAATTTACCTAATGAAACTTCAAATTACTTTCACAAACTTGGTTTCCCACCTTTTGATTTAACCCCCACCAACATGGGTCCTATGAGTTTCACCTCCATTTTAGGTGCAAACACTCAACAATTGCCTGGTTTGGAGCTTGGATTGTCCCAAGATGGTCATATCGGGGTCATAAATCCTCAAGCTCTCAACCAAATTTACCAACAGATGGGACAACCTAGAGTTCATCAACATCACCACCAGCAACCTCCTGCTAAGGATGATTCTCAAGATTCAGCCTAG 891 47.36 MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEEAIMGENKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTALWPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVINPQALNQIYQQMGQPRVHQHHHQQPPAKDDSQDSA* 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17303644 17304534 + Chy6G120760.1 Chy06g01548 229257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01548 296 MobiDBLite consensus disorder prediction 53 77 - -
Chy06g01548 296 MobiDBLite consensus disorder prediction 274 296 - -
Chy06g01548 296 Pfam TCP family transcription factor 66 156 IPR017887 -
Chy06g01548 296 ProSiteProfiles TCP domain profile. 67 121 IPR017887 -
Chy06g01548 296 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 37 295 IPR005333 GO:0003700
Chy06g01548 296 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 37 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01548 Chy-Chr6:17303644 Chy12g01554 Chy-Chr12:19166908 1.60E-37 dispersed
Chy06g01548 Chy-Chr6:17303644 Chy02g02504 Chy-Chr2:28485684 1.97E-37 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18192 PF03634 TCP 3.30E-30 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01548 - - csv:101222902 548.51