Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01559 ATGCCTTTGCTTTCTTCGAAGGCCTCTTCCAATAACGATGGTTTCTACTACTATCACTTTCATCTTTATGATCCTCGATCTCTTTTTGGAGCTGGAAACTCCTCCATTGACGATGCTCTCTCCATTACACCGCTTCAGGACTTACCTCTCTCTACTAATCCTCCATCTCCTAGACTTGTAGCAACCAACCGTGCGCAGTCGTTTGAGCCGATTGTTGTAACGAAGGTGGATACTGAAATACAAGGAGTACGAAAACTGAAAGAGGTTAGTGATATTGATGGCGATGTAGAGAGTGGCAATGAGCAACGACAGAAGCTGATGAAGAGTTTATCAACAAAGAAAATTAAGAGGGAGGAATTGAGGAAGAAGATCTTGTTAGGGTTTAAAATTTGTGGATTTGCCTTCTGTTTGGTCTTAGTTTCGGTTATGGCTTCTGATAAGGTACTATATGGCAGTGAATGCATCTCAGAGCAAACGATCACAGCAACGCCTGAGTTTCTAGGGCTTGGATCTTCACACTTCGCCAAAATGAATGACGCAGATGTTTCCAAGCAGATCCAGCAGATGGTCAGGTTCATCCGCCAGGAAGCCGAGGAAAAGGCTAACGAGATCTCCGTCTCTGCTGAAGAAGAATTCAATATAGAAAAGTTGGAGCTGGTTGAGGCAGAGAAGAAGAAGATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCAATGCAGCTCAATGCTTCTCGTATCAAAGTTCTGCAAGCTCAGGATGATGTTGTAAACGACATGAAAGAGGCAGCTTCAAAGGAGCTTCTCAGTGTAGGCCAAAATGAACATGTCTACAAAAATCTTTTGAAGGATCTCATTGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTATTGCGATGCCGCAAAAGTGACGTTCATTTGGTAGAGTCTGTGCTGGGTTCAGCAGCTGTTGAATATGCAGAGAAAGCAAAAGTTCATGAGCCAGATATCATTGTTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCACGGTCTTTCTTGCTCTGGAGGAGTGGTCTTGGCATCTCGAGATGGGAAGATTGTCTGTGAGAACACCCTTGATGCTAGATTGGATGTTGTGTTCCGTAAAAAACTTCCAGAGATCCGTAAAAGCCTTTTCAGTCAAGTTGCTGCATGA 1218 44.01 MPLLSSKASSNNDGFYYYHFHLYDPRSLFGAGNSSIDDALSITPLQDLPLSTNPPSPRLVATNRAQSFEPIVVTKVDTEIQGVRKLKEVSDIDGDVESGNEQRQKLMKSLSTKKIKREELRKKILLGFKICGFAFCLVLVSVMASDKVLYGSECISEQTITATPEFLGLGSSHFAKMNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLELVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNDMKEAASKELLSVGQNEHVYKNLLKDLIVQSLLRLKEPAVLLRCRKSDVHLVESVLGSAAVEYAEKAKVHEPDIIVDHVHLPPGPSHHHHHGLSCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKSLFSQVAA* 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17559289 17568092 + Chy6G120870.1 Chy06g01559 229268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01559 405 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 177 405 IPR002842 GO:0033178|GO:0046961|GO:1902600
Chy06g01559 405 Gene3D - 171 238 - -
Chy06g01559 405 Pfam ATP synthase (E/31 kDa) subunit 192 400 IPR002842 GO:0033178|GO:0046961|GO:1902600
Chy06g01559 405 Hamap V-type proton ATPase subunit E [atpE]. 184 401 IPR002842 GO:0033178|GO:0046961|GO:1902600
Chy06g01559 405 Gene3D - 268 404 IPR038495 -
Chy06g01559 405 Coils Coil 214 237 - -
Chy06g01559 405 Coils Coil 103 123 - -
Chy06g01559 405 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 177 405 - -
Chy06g01559 405 SUPERFAMILY V-type ATPase subunit E-like 263 400 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01559 Chy-Chr6:17559289 Chy09g00329 Chy-Chr9:2859552 7.50E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01559 K02150 - csv:101217221 389.037