Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g01579 | ATGGGTTTTGATGATTTTTCTAAAACAGGGTTGGTGTTGGGATTAGGGCTCTCGGAATTAGCTGACGATCAAAGGACGACATTAAAGAAGAAGCCTGCACCTTGCTCCTCCGGTTCACTTGATTTTGAGCCTTGTGTTTTGACTTTGGGATTTTCCGGTGGTGGTGGCGACACTCATCGGAAAGTTATTGATCATGTGGGTGTTCATCATTTGTATCGCCAAGCATCCCCTCATAGCAGCGCTGTTTGTTCTTCGTTCTCGGGTAAGGTTAAAAGAGAGAGAGATCTGAGCAGTGAAGAAGTTGAATTGGAGAGAGCTTGTTGGAGAGTTAGTGATGAAGATGACGATGTTTGTAATAATACTAGAAAGAAACTTAGACTCTCTAAACAACAATCCGGTCTCTTGGAAGAAAGTTTCAAACAGAATAGCACGCTCAATCCTAAGCAAAAACAAGGGTTAGCAAGACAGCTAAATCTACTGCCACGACAAGTTGAAGTATGGTTTCAGAATAGGAGAGCTCGAACAAAAGTGAAGCAAACAGAAGTAGATTGTGAGTTGTTGAAGAAGTGTTGTGAGACGTTGACGGATGAAAATAGAAGATTACAAAAGGAGGTTCAAGAATTGAAGGCAATAAAGCTGGCAAAACCTGTATACATGCAGATGTCCGGGGCGTCATTAACCATATGCCCCTCATGCGAAAGGGTGGGTACTGGCGGCCATGGTGGTGTCGCGGACGGTAATTCTAATTCCAAACCCAAATTTTCAATGCCTCCTAACCCTCTCTTTTACAATCCCTTCTCCAATCCTTCAGCCGCTTGTTAG | 822 | 43.43 | MGFDDFSKTGLVLGLGLSELADDQRTTLKKKPAPCSSGSLDFEPCVLTLGFSGGGGDTHRKVIDHVGVHHLYRQASPHSSAVCSSFSGKVKRERDLSSEEVELERACWRVSDEDDDVCNNTRKKLRLSKQQSGLLEESFKQNSTLNPKQKQGLARQLNLLPRQVEVWFQNRRARTKVKQTEVDCELLKKCCETLTDENRRLQKEVQELKAIKLAKPVYMQMSGASLTICPSCERVGTGGHGGVADGNSNSKPKFSMPPNPLFYNPFSNPSAAC* | 274 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 17890031 | 17891070 | + | Chy6G121070.1 | Chy06g01579 | 229288 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g01579 | 273 | ProSitePatterns | 'Homeobox' domain signature. | 153 | 176 | IPR017970 | GO:0000981|GO:0006355 | |
Chy06g01579 | 273 | Pfam | Homeobox associated leucine zipper | 178 | 211 | IPR003106 | GO:0006355|GO:0043565 | |
Chy06g01579 | 273 | Pfam | Homeodomain | 122 | 176 | IPR001356 | GO:0003677 | |
Chy06g01579 | 273 | ProSiteProfiles | 'Homeobox' domain profile. | 118 | 178 | IPR001356 | GO:0003677 | |
Chy06g01579 | 273 | Gene3D | - | 126 | 176 | - | - | |
Chy06g01579 | 273 | SUPERFAMILY | Homeodomain-like | 113 | 179 | IPR009057 | - | |
Chy06g01579 | 273 | CDD | homeodomain | 122 | 179 | IPR001356 | GO:0003677 | |
Chy06g01579 | 273 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22-LIKE | 6 | 273 | - | - | |
Chy06g01579 | 273 | Coils | Coil | 184 | 211 | - | - | |
Chy06g01579 | 273 | PANTHER | - | 6 | 273 | - | - | |
Chy06g01579 | 273 | SMART | halz | 178 | 221 | IPR003106 | GO:0006355|GO:0043565 | |
Chy06g01579 | 273 | SMART | HOX_1 | 120 | 182 | IPR001356 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g01579 | Chy-Chr6:17890031 | Chy07g00219 | Chy-Chr7:1789671 | 2.53E-59 | dispersed | |
Chy06g01579 | Chy-Chr6:17890031 | Chy02g00808 | Chy-Chr2:5048828 | 1.89E-95 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18194 | PF00046 | Homeodomain | 7.20E-16 | CL0123 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g01579 | K09338 | - | csv:101205848 | 534.643 |