Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01584 ATGCCATTCTTCAACCTTCACCCTTCTTCTCCCTTTCTTCTTCTCTTCTTCTTCTTCTTTCAGCTCCCTGCTTTTGCTATCCTCTCTAAGCGTGATTACGATATTCTGATCCGGGTTAAAACCTCTTATCTCCATGATCCCAATGGCTCTAGGAACAATTGGGTTCCAAATCAAGCTCACAATGCTTGTAATTGGACTGGCATCACCTGCGACTCCACTAATTCCTCTATTCTCTCCATCGATCTCAGTAATTCCGGTTTCGTCGGCGGATTTCCCTTCGTTTTTTGCCGGATTCCCACTCTTAAATCCCTTTCTATATCCAACACTAACCTTAATGGAACTTTACTCTCTCCTTCCTTCTCTCTTTGTTCTCACTTGCAACTCCTCAATCTTTCCGATAACCTTCTCGTTGGTAACTTGCCGGACTTTTCTTCTGGTTTCAAACAACTGCAAACTCTCGATCTCTCTGCCAACAATTTCACAGGTGAAATTCCTCATAGCTTTGGGGGGTTATCCGCGCTGAAAGTGCTCCGTTTGTCGCAGAATCTACTCGACGGCTCATTACCTTCCGTTCTGGGAAATCTCAGTGAGCTAACTGAAATGGCCATCGCTTATAATCCGTTTAAACCCGGTCGGTTACCACCTGAAATCGGCAACCTGACGAAACTTGTAAATATGTTTTTACCGTCTTCCAAACTCATTGGACCCATTCCTGATTCCATTGGAAACCTTGCTCTGCTTACTAATCTCGATTTATCTACCAATTCAATTTCGGGACCGATCCCGTATTCAATCGGTGGATTAAGAAGTATAAAGAGCATTCGACTCTATAACAACCAAATCTCCGGGGAGTTGCCAGAGAGCATCGGAAATTTGACTACTTTGTTTTCCCTGGACTTATCGCAGAATAGTCTCACCGGGAAATTGTCGGAGAAAATTGCTGCTTTGCCTCTTCAGTCTCTGCATCTCAATGACAATTTCCTTGAAGGCGAGGTTCCCGAGACCTTAGCTTCTAACAAAAATCTTTTGAGTTTGAAACTCTTTAACAATAGCTTTTCCGGCAAACTTCCTTGGAATTTGGGTCTAACTTCTTATTTGAATTTGTTTGACGTCTCTTCCAACAATTTCATGGGCGAAATTCCGAAATTTCTCTGCCATGGAAATCAACTTCAAAGAATCGTTTTATTCAATAATCATTTCTCAGGAAGTTTTCCAGAAGCGTACGGTGGTTGCGATTCTCTGCTTTATGTCAGAATTGAGAACAATCAACTTTCCGGGCAGATACCGGACTCGTTCTGGAATCTCTCTAGACTTACTTATATTCGGATATCAGAAAATCGATTTGAGGGCTCCATTCCGCTTGCGATAAGTGGCATTCGTTATCTCCAAGATTTGGTGATATCCGGCAACTTCTTCTCCGGCCAATTACCAAAGGAGATTTGCAAGCTGCGAGACCTCGTCCGGTTAGACGTCAGCAGGAATAAATTCTCCGGGGAAGTTCCTTCATGTATAACAGAGTTGAAGCAAGTTCAAAAGCTCGACCTCCAAGAAAACTTGTTCACCGGAGAAATACCCAAGTTGGTTAACACATGGAAAGAGTTAACCGAGTTGAATCTATCTCACAATCAATTCACCGGTGAGATTCCGCCTCAACTCGGAGATTTACCAGTTCTGAAATATTTAGATCTCTCTTCAAATTTACTCTCTGGCGAAATCCCCGAGGAATTAACGAAACTAAAACTTGGTCAGTTCAATTTTTCCGACAACAAACTGACCGGAGAAGTTCCTTCCGGCTTCGACAACGAACTATTTGTCAATAGCCTAATGGGTAATCCCGGTCTATGTAGCCCGGATTTGAAGCCGCTGAACCGGTGTCCCAAATCCAAATCCATAAGTCTTTATATCGTTATTGTTCTGTCCCTCATTGCTTTCGTTCTTATCGGATCTCTCATTTGGGTAGTCAAATTTAAGATTAATCTCTTCAGAAAATCAAAATCTTCATGGATGGTGACTAAGTTCCAACGTGTTGGATTTGACGAAGAAGATGTAATTCCTCATTTAACCAAAGCAAATATTATTGGATCAGGCGGATCAAGCACTGTGTTCAAGGTGGACCTAAAAATGGGGCAAACTATCGCCGTGAAGAGTCTTTGGAGTGGCCACAACAAATTGTATTTGGAATCGATTTTCCAATCAGAAGTTGAGACACTGGGTCGGATTCGCCATGCCAATATTGTGAAGTTGCTCTTCAGTTGCAGCAATGGTGAAGGAAGTAAAATTCTTGTTTACGAATACATGGAGAATGGAAGTTTGGGAGATGCTCTACATGAACACAAATCCCAAACTTTATCTGATTGGTCCAAACGACTTGACATCGCTATTGGAGCAGCTCAAGGATTAGCTTACTTACACCATGATTGCGTTCCTCCAATAATCCATCGTGATGTTAAGAGCAACAACATTCTCTTGGATGAAGAATTCCACCCACGAGTGGCTGACTTTGGTTTAGCCAAGACGATGCAGCGCCAAGGAGAGACAGACAACGGCAATGTCATGTCTCGTATTGCTGGCTCCTATGGTTACATTGCTCCTGAGTATGGGTATACAATGAAGGTGACAGAGAAGAGCGATGTGTATAGTTTTGGAGTGGTGTTGATGGAGTTAGTGACAGGGAAGCGACCGAATGATCCATGCTTTGGAGAGAACAAAGATATTGTGAAATGGATGACAGAGATTTCATTGTCAGAAGGAGATGAAGAGAAAGGGTTAAGTTTAGAGGAGATTGTTGATGAAAAGTTGGATCCAAAGACATGTGCAGTAGAAGAGATAGTGAAGATTTTGGATGTGGCAATTCTTTGTACCTCTGCTTTGCCTCTCAATAGACCATCAATGCGAAGAGTGGTTGAGCTGATAAAGGACACCAAATTGCCTCATTCCAAGTCGTGA 2946 42.53 MPFFNLHPSSPFLLLFFFFFQLPAFAILSKRDYDILIRVKTSYLHDPNGSRNNWVPNQAHNACNWTGITCDSTNSSILSIDLSNSGFVGGFPFVFCRIPTLKSLSISNTNLNGTLLSPSFSLCSHLQLLNLSDNLLVGNLPDFSSGFKQLQTLDLSANNFTGEIPHSFGGLSALKVLRLSQNLLDGSLPSVLGNLSELTEMAIAYNPFKPGRLPPEIGNLTKLVNMFLPSSKLIGPIPDSIGNLALLTNLDLSTNSISGPIPYSIGGLRSIKSIRLYNNQISGELPESIGNLTTLFSLDLSQNSLTGKLSEKIAALPLQSLHLNDNFLEGEVPETLASNKNLLSLKLFNNSFSGKLPWNLGLTSYLNLFDVSSNNFMGEIPKFLCHGNQLQRIVLFNNHFSGSFPEAYGGCDSLLYVRIENNQLSGQIPDSFWNLSRLTYIRISENRFEGSIPLAISGIRYLQDLVISGNFFSGQLPKEICKLRDLVRLDVSRNKFSGEVPSCITELKQVQKLDLQENLFTGEIPKLVNTWKELTELNLSHNQFTGEIPPQLGDLPVLKYLDLSSNLLSGEIPEELTKLKLGQFNFSDNKLTGEVPSGFDNELFVNSLMGNPGLCSPDLKPLNRCPKSKSISLYIVIVLSLIAFVLIGSLIWVVKFKINLFRKSKSSWMVTKFQRVGFDEEDVIPHLTKANIIGSGGSSTVFKVDLKMGQTIAVKSLWSGHNKLYLESIFQSEVETLGRIRHANIVKLLFSCSNGEGSKILVYEYMENGSLGDALHEHKSQTLSDWSKRLDIAIGAAQGLAYLHHDCVPPIIHRDVKSNNILLDEEFHPRVADFGLAKTMQRQGETDNGNVMSRIAGSYGYIAPEYGYTMKVTEKSDVYSFGVVLMELVTGKRPNDPCFGENKDIVKWMTEISLSEGDEEKGLSLEEIVDEKLDPKTCAVEEIVKILDVAILCTSALPLNRPSMRRVVELIKDTKLPHSKS* 982
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17955989 17959016 - Chy6G121120.1 Chy06g01584 229293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01584 981 SUPERFAMILY L domain-like 380 621 - -
Chy06g01584 981 SUPERFAMILY L domain-like 56 311 - -
Chy06g01584 981 Gene3D Ribonuclease Inhibitor 29 210 IPR032675 -
Chy06g01584 981 ProSitePatterns Protein kinases ATP-binding region signature. 693 715 IPR017441 GO:0005524
Chy06g01584 981 SMART serkin_6 687 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01584 981 Pfam Leucine rich repeat 389 448 IPR001611 GO:0005515
Chy06g01584 981 Pfam Leucine rich repeat 509 568 IPR001611 GO:0005515
Chy06g01584 981 Pfam Leucine rich repeat 149 207 IPR001611 GO:0005515
Chy06g01584 981 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Chy06g01584 981 SMART LRR_typ_2 483 507 IPR003591 -
Chy06g01584 981 SMART LRR_typ_2 268 292 IPR003591 -
Chy06g01584 981 SMART LRR_typ_2 555 579 IPR003591 -
Chy06g01584 981 SMART LRR_typ_2 147 170 IPR003591 -
Chy06g01584 981 SMART LRR_typ_2 171 195 IPR003591 -
Chy06g01584 981 ProSiteProfiles Protein kinase domain profile. 687 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01584 981 Pfam Protein kinase domain 689 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01584 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Chy06g01584 981 Gene3D Ribonuclease Inhibitor 211 314 IPR032675 -
Chy06g01584 981 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 15 976 - -
Chy06g01584 981 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 15 976 - -
Chy06g01584 981 Gene3D Transferase(Phosphotransferase) domain 1 766 980 - -
Chy06g01584 981 Gene3D Ribonuclease Inhibitor 315 632 IPR032675 -
Chy06g01584 981 SUPERFAMILY Protein kinase-like (PK-like) 680 970 IPR011009 -
Chy06g01584 981 Gene3D Phosphorylase Kinase; domain 1 662 765 - -
Chy06g01584 981 SUPERFAMILY L domain-like 317 404 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00272 Chy-Chr2:1774454 Chy06g01584 Chy-Chr6:17955989 3.13E-21 dispersed
Chy03g01266 Chy-Chr3:15720967 Chy06g01584 Chy-Chr6:17955989 0 dispersed
Chy04g00175 Chy-Chr4:1542431 Chy06g01584 Chy-Chr6:17955989 1.24E-168 dispersed
Chy05g01256 Chy-Chr5:16912310 Chy06g01584 Chy-Chr6:17955989 5.76E-131 dispersed
Chy06g01584 Chy-Chr6:17955989 Chy12g01139 Chy-Chr12:16342205 1.11E-34 dispersed
Chy08g00043 Chy-Chr8:1573346 Chy06g01584 Chy-Chr6:17955989 6.42E-138 dispersed
Chy10g00351 Chy-Chr10:8781934 Chy06g01584 Chy-Chr6:17955989 4.29E-10 dispersed
Chy06g01584 Chy-Chr6:17955989 Chy12g00907 Chy-Chr12:14466675 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71338 PF00069 Pkinase 9.30E-42 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01584 - - csv:101219140 1829.3