Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01597 ATGGTGCGATATTCTGACAGTCAAACCGACACCCAAGATTCCTCTTTAACTCATATTTACGACCATGCTTCCGCTCCTTACTTCTCTCATGACCAACAAGATCTCAAAACCATTGCAGCTTTTCAAGCTTTCTCAGCCAACTCTGGCTCTGAAGTTGATGATTCTGCTTCTATTCCTACAACCCATATCCCTTCTGCTCATTCTATTGACTCTTCTCTTACCAATAATGATTTCCCTTCTTTCTCTACTGGTGCTCTCTCTCTCGCCGTCGCTCAATCCTCCGACACTGCTCCTGCGCCCGTCGTTGTTGCTGTTGATTCTGATTCTTCTAAGAAAATTGCTGACACTTTTGGCCAGAGAACTTCCATTTACAGAGGAGTCACTAGGCACAGATGGACGGGTAGATACGAAGCGCATCTATGGGATAACAGCTGTAGAAGAGAGGGTCAGGCTAGGAAAGGACGTCAAGTTTACTTAGGTGGGTATGATAAGGAGGAAAAAGCAGCTAGGGCTTATGATTTGGCAGCTTTGAAGTACTGGGGTCCCACAGCAACCACAAATTTTCCTGTTTCTAATTATGCCAAGGAATTAGAAGAAATGAAACAAGTCACCAGGCAAGAGTTTATCGCTTCTTTGCGAAGAAAGAGCAGTGGTTTCTCGCGAGGTGCTTCTATTTATAGAGGTGTAACAAGGCATCACCAACAGGGTCGATGGCAGGCGAGAATTGGTCGTGTTGCTGGGAACAAGGACTTGTATCTTGGAACGTTTGCTACTGAAGAGGAAGCAGCCGAGGCTTACGATATAGCAGCAATCAAGTTTAGAGGTTTGAATGCTGTGACGAACTTTGAGATGAGTCGATATGATGTGGAAGCTATTGCCAAGAGTGCACTGCCTATTGGAGGAGCAGCAAAGAGGCTGAAGCTTTGCCTGGAATCCGATCAGAAGCCAATTCCAAATCACGATCAAGCAACCCAATGTAGCAGTGGAAGCAACAATATCAACTTTGGCACCGCCATGCAAGCTGTCCCGCCGATCCCTTGTGGCATTCCATACGACACCGCAGCTGTGCTGTATCACCATAACTACTTCCATCATCTTCAACCTCATGCCATCGGTTCATCGGAGTCGACCAGCCCAGGCATTGCAGTACCAGGGACCGTGGGACCTCAAGCAACCGAGTTTTTTGTTTGGCCTCACCAATCGTATTAG 1209 46.82 MVRYSDSQTDTQDSSLTHIYDHASAPYFSHDQQDLKTIAAFQAFSANSGSEVDDSASIPTTHIPSAHSIDSSLTNNDFPSFSTGALSLAVAQSSDTAPAPVVVAVDSDSSKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYAKELEEMKQVTRQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGLNAVTNFEMSRYDVEAIAKSALPIGGAAKRLKLCLESDQKPIPNHDQATQCSSGSNNINFGTAMQAVPPIPCGIPYDTAAVLYHHNYFHHLQPHAIGSSESTSPGIAVPGTVGPQATEFFVWPHQSY* 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18383126 18386541 + Chy6G121250.1 Chy06g01597 229306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01597 402 CDD AP2 122 191 IPR001471 GO:0003700|GO:0006355
Chy06g01597 402 PRINTS Ethylene responsive element binding protein signature 265 285 IPR001471 GO:0003700|GO:0006355
Chy06g01597 402 PRINTS Ethylene responsive element binding protein signature 124 135 IPR001471 GO:0003700|GO:0006355
Chy06g01597 402 SUPERFAMILY DNA-binding domain 122 191 IPR016177 GO:0003677
Chy06g01597 402 Gene3D AP2/ERF domain 225 285 IPR036955 GO:0003700|GO:0006355
Chy06g01597 402 Gene3D AP2/ERF domain 123 191 IPR036955 GO:0003700|GO:0006355
Chy06g01597 402 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 8 381 - -
Chy06g01597 402 SUPERFAMILY DNA-binding domain 224 285 IPR016177 GO:0003677
Chy06g01597 402 ProSiteProfiles AP2/ERF domain profile. 225 283 IPR001471 GO:0003700|GO:0006355
Chy06g01597 402 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 381 - -
Chy06g01597 402 CDD AP2 224 285 IPR001471 GO:0003700|GO:0006355
Chy06g01597 402 Pfam AP2 domain 225 275 IPR001471 GO:0003700|GO:0006355
Chy06g01597 402 Pfam AP2 domain 123 181 IPR001471 GO:0003700|GO:0006355
Chy06g01597 402 SMART rav1_2 225 289 IPR001471 GO:0003700|GO:0006355
Chy06g01597 402 SMART rav1_2 123 195 IPR001471 GO:0003700|GO:0006355
Chy06g01597 402 ProSiteProfiles AP2/ERF domain profile. 123 189 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01597 Chy-Chr6:18383126 Chy07g00211 Chy-Chr7:1699930 2.79E-109 dispersed
Chy06g01597 Chy-Chr6:18383126 Chy02g00817 Chy-Chr2:5154355 5.54E-114 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18196 PF00847 AP2 6.80E-13 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01597 K09285 - csv:101217714 779.63