Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g01600 | ATGTTTTCTTGCTTCTACCGTTTGACTTTTTCAGAAGTTACTTTTTCAGCTGTCATTGTGCTGCTAGGAGTCCCATTGTTCAAGTTCCATCTTGCCAGCATTTATTTAGTTTTAGCAATGGTTCTTGTTGGGTCTTTGCAACTGTCCTATCATCTGAGACCGTGGAGAAATTATTTGCACGAAGAAAATCTTAAGTTAACGTCCCAGAGATATGGCATCCGGCTTCTGAATGTAGCCAGTTCATCGTCTCTTTTGTTTCAGAAGGACATTTGGAGCACTCATTTATTTAGCATGAAATACCCACCTAATTACACTGTGCCTTCTAGATACAATGTATTCAGGTGCCAATCATCATTGATGACAAACCAACCACTGGATCCTTCTGAGATGAAGGCTGCCATAGTGACATTGATGAGGTTTTGTAATGTATTAGGTGGTTGTCCTCCTCCAGTGATTAAGTTACTTCCCCCAGTTTGTATTATACTATTTGCTGTATGGGGTCTTGGACCATTTTTGTGTTGTACAAGAAGCCTATTCCATAATGATAGTAACTGGAAGAAAAGTCGGACGTATAATGTCATGACCTTGTATCTTCAACCATTATTGCTATGGACTGGAGCCACACTTATTTGCAGAGCTTTAGATCCAATAGTTTTACGTACAGAGTCCAGCCAAGTTGTGAAGCAACGAGTGTTGAATTTTGTTAGGTCGCTGTCCACTGTGCTGGCCTCTGCATATTGTTTATCTAGCATGATTCAACAAGCACAGAAATTCTTCTCAGAGAGTACTGAATCCAGTGACGCCAGAAATATGGGCTTTCAATTTGCATGGAAAGCTGTATATTCTGCAGTATGGGTTGCTGCTATCTCATTGTTCATGGAGCTATTAGGCTTTTCAACCCAAAAATTGCTTACAGCTGGAGGTCTTGGGACTGTATTGTTGACATTAGCTGGCCGTGAGATTTTCACCAACTTTCTTTCGAGTGTGATGATTCATGCAACTCGTCCTTTTGTTGTTAATGAGTGGATCCAAACAAAGATTGAGGGCTACGAAGTTTCTGGTACTGTTGAGCATGTAGGGTGGTGGTCGCCAACAATCATTAGAGGTGAAGATCGTGAAGCAGTTCACATACCAAACCATCAATTTACCATGAATGTTGTTAGAAATCTCAGTCAAAAAACTCACTGGCGGATTAAAACCCACCTTGCCATCAGCCATTTGGACGTCAATAAAATCAACAACATTGTCGCAGACATGCGGAAAGTCTTGGCAAAGAACCCTCAAGTTGAACAACAGAGATTGCATAGAAGAGTATTTTTGGAAAACGTGGATTCTGAAAATCAGGCACTTTTGATTTTGATATCTTGTTTTGTCAAGACTTCACATTTTGAAGAATACCTATGTGTAAAGGAAGCTATAATTTTGGATCTTCTTAGAGTCATTAGGCACCACGGGGCTCGACTTGCAACGCCAATCCGCACAATGCAGAAGATGCATAGTGATTCAGACTTGGAAAATGTTCCATTTTCTGATTCAATATTTGGCCACCGTGGTGCAACTTTGAATCGCCGCATGCTGATGATTGAGCCTCCTTACAAAGTTTATGGAGAAGATAGAAAACAAAGCCATAGCAGGACATCACGTACAACTGGAGAACAAAATGGTAAGTCCATTGCACGGTCATCAGGTGACAGTAAAGCAGCTAAAGAGACAATGTCATCTGATAGAAAGATAGAAGTCAAGACTGGAGGAGACGCTGATACAAAAAAGCATTCCAAAGTTTCAATGTCAGCCTCTGAAGACAAATCAAGCAATGAATTGAAACATAAACCATCATCAAAGTCTGCTGTAAGTACCTCTGATACGCCAACTTCTAATGCCAAACCAACTAAATCAGATGCTGATAATTCATTGGAAGATTCCCGTCCCAAGCAATCCAAAGACAGCTTGGGAAGTAACATGCAGAACTTCAAGCCTTCCCTTCCTGCTGTTTCCTCTCCGGAAAATGTTAAGAAACCCGGAGGAACTACTTCAGCAGCAGCTTCACAACCAAGAATCGAAGGTGAGCAGACAACAGTTTCAAATCCATCAACTAAGAAGCCTGGGGTAGAAGAGAATATAATCCTTGGTGTTGCTTTGGACGGCTCTAAGAGAACACTTCCTATTGAGGACAATGTACCTACTACCGCATCTGGAGCAAAAGATTTGGCTGCATTCAATGGAGCAACGACAGATAAGAATACGAAACGTCAGTCTCCTTCATCTCCTACCACATCTTCTAGTGAATAG | 2289 | 41.24 | MFSCFYRLTFSEVTFSAVIVLLGVPLFKFHLASIYLVLAMVLVGSLQLSYHLRPWRNYLHEENLKLTSQRYGIRLLNVASSSSLLFQKDIWSTHLFSMKYPPNYTVPSRYNVFRCQSSLMTNQPLDPSEMKAAIVTLMRFCNVLGGCPPPVIKLLPPVCIILFAVWGLGPFLCCTRSLFHNDSNWKKSRTYNVMTLYLQPLLLWTGATLICRALDPIVLRTESSQVVKQRVLNFVRSLSTVLASAYCLSSMIQQAQKFFSESTESSDARNMGFQFAWKAVYSAVWVAAISLFMELLGFSTQKLLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHQFTMNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLENVDSENQALLILISCFVKTSHFEEYLCVKEAIILDLLRVIRHHGARLATPIRTMQKMHSDSDLENVPFSDSIFGHRGATLNRRMLMIEPPYKVYGEDRKQSHSRTSRTTGEQNGKSIARSSGDSKAAKETMSSDRKIEVKTGGDADTKKHSKVSMSASEDKSSNELKHKPSSKSAVSTSDTPTSNAKPTKSDADNSLEDSRPKQSKDSLGSNMQNFKPSLPAVSSPENVKKPGGTTSAAASQPRIEGEQTTVSNPSTKKPGVEENIILGVALDGSKRTLPIEDNVPTTASGAKDLAAFNGATTDKNTKRQSPSSPTTSSSE* | 763 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 18425693 | 18434045 | + | Chy6G121280.1 | Chy06g01600 | 229309 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g01600 | 762 | Pfam | Mechanosensitive ion channel | 279 | 487 | IPR006685 | GO:0016020|GO:0055085 | |
Chy06g01600 | 762 | MobiDBLite | consensus disorder prediction | 719 | 762 | - | - | |
Chy06g01600 | 762 | MobiDBLite | consensus disorder prediction | 647 | 663 | - | - | |
Chy06g01600 | 762 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC | 40 | 750 | - | - | |
Chy06g01600 | 762 | Gene3D | - | 337 | 392 | IPR023408 | - | |
Chy06g01600 | 762 | MobiDBLite | consensus disorder prediction | 610 | 632 | - | - | |
Chy06g01600 | 762 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 40 | 750 | IPR045042 | - | |
Chy06g01600 | 762 | SUPERFAMILY | Sm-like ribonucleoproteins | 321 | 391 | IPR010920 | - | |
Chy06g01600 | 762 | Gene3D | - | 236 | 335 | - | - | |
Chy06g01600 | 762 | MobiDBLite | consensus disorder prediction | 534 | 704 | - | - | |
Chy06g01600 | 762 | MobiDBLite | consensus disorder prediction | 741 | 762 | - | - | |
Chy06g01600 | 762 | MobiDBLite | consensus disorder prediction | 569 | 609 | - | - | |
Chy06g01600 | 762 | MobiDBLite | consensus disorder prediction | 670 | 701 | - | - | |
Chy06g01600 | 762 | MobiDBLite | consensus disorder prediction | 547 | 568 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy03g01308 | Chy-Chr3:16081857 | Chy06g01600 | Chy-Chr6:18425693 | 0 | dispersed | |
Chy06g01600 | Chy-Chr6:18425693 | Chy06g00156 | Chy-Chr6:1021185 | 1.60E-12 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g01600 | K22047 | - | csv:101217250 | 1379.0 |