Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01607 ATGCATAAACCCAACGAAAATCTCTCGATTCTCTCCTATAGACAAGTCGTCCGTGCGCTCTTGGAGTCTGGCTACACTACAATCCATACCTCCATCTTCCCCGGCTCCGATTCTTCCCATTTGTTAAATCTCCTGCCCTCCACTAACCCTAATGCTAACCTTAGGGTTTTCGAAGCGGATTTAATGGACGGTGAGGCGGTGGCCAGAGCTGTGGAAGGCTGCAAGGGAGTATTCCATATCGCATCCCCCTGTACATTAGAGGATCCGGTTGATCCACAGAAAGAATTGGTGGAGCCAGCGGTTCAAGGCACTATGAATGTCCTTAATGCGGCGAAGAAGTTAGGAGTGAGGCGTGTTGTTCTTACTTCTTCTATTTCGGCTCTTGTCCCTAATCCTGGTTGGCCGTCCCATATGCCTTTTGATGAATCTTCATGGACGGACCTAGAATACTGCATATCCCGCAAGGTTCTTTTTTCCTTCCTTTTGGTTTTCATGTTTGGCAGCTTCCAATTGGTTGATGGACTGTAA 528 47.73 MHKPNENLSILSYRQVVRALLESGYTTIHTSIFPGSDSSHLLNLLPSTNPNANLRVFEADLMDGEAVARAVEGCKGVFHIASPCTLEDPVDPQKELVEPAVQGTMNVLNAAKKLGVRRVVLTSSISALVPNPGWPSHMPFDESSWTDLEYCISRKVLFSFLLVFMFGSFQLVDGL* 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18532215 18532900 - Chy6G121350.1 Chy06g01607 229316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01607 175 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 16 158 - -
Chy06g01607 175 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 16 158 - -
Chy06g01607 175 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 37 131 IPR002225 GO:0003854|GO:0006694|GO:0016616
Chy06g01607 175 Gene3D - 14 160 - -
Chy06g01607 175 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 159 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01607 Chy-Chr6:18532215 Chy12g00332 Chy-Chr12:3552674 9.58E-41 dispersed
Chy06g01607 Chy-Chr6:18532215 Chy04g01344 Chy-Chr4:20058566 1.62E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01607 - - csv:101213078 281.952