Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01631 ATGGGAATTCATTTACCTTCGCTTCTCCTCAATGCCAAGCAAATATTCAGAACACAATCTGTTTCAACAAGATGTCATTCCAACCCCTTGCCTACGCTCCAAGCACCTGTTGCCGCCAGCAACGCATCGCGCCACCGACTGGCTCTGCCTCCGTTCGATCGTGGGCCATCCAAGCGTATCCGGAAAGTTGCCGGAAATTTCACTCTCCATCTCTCTCTACAATCCGTTCCATCACAGCCGCGCGTGGCCAATCTCCATCCAGCCATTGCCACCGCTGCCATTCGCCGGATTCCGCGTTCGCCTGCCGTCGCCAGTTCGTTGCCTCTATCGCCGGATTCTTTGGTTTTGGTATGTTTTACTCACACAGCCATGTCTCTCCGCAACCATGTTGATGAAATTGACATTGAGCATCCTGCCGACAAGGAAGATGGTGTGGTTGATGAGGACATGGAAGTTCTTCAGAGAGCCTATAGGCTTGTTGGTGTTAATCCTGAGGATTATATTAATCAAAGGTTGTCATCACCTGCTGCCGGAGATGCTGATCATGGTTCTGATTCTGATGATGTTGATGATTTTGAACTTCTTCGAGATATTCAGAATCGGTTCTCGATTTTGGCTGATGAGCAGCCACAGAGTACTCTCCCACCAGTGTCTGCAGACGAGGAGGAAGATGAATTTGAGATGCTTCGTTCGATACAGCGGCGCTTTGCTGCGTATGAAAGTGATACTTTGAGAAATAAACCCAATCAGTCTCGTGACTATGTTGGGTCTCTGAAGATGGATTCTGACGACATATCTGTTGAGAGCCAGACATCCTCAAAAAGGCCATCCGTGCTAGCCTTTGAAAAGGGAAGCTTGCCAAAGGCTGCGTTGGCATTTGTTGATGCCATCAAGAAGAATAGGTCCCAGCAGAAGTTTATTCGTAGTAAGATGATTCATCTTGAAGCTAGAATTGAGGAGAACAAAAAGCTCAGAAAACGTTGCAAAATTCTCAAAGATTTCCAGGGTTCATGTAAGCGAAGAACAAGTTGTGCACTGTCTCAAATGATAGATCCTCGAGTCCAGTTAATTTCAGCTGCAAAACCACAAGCAAAGGATTCATCAAAGAAGGACAAACGATTATCTGGAATGTATTATGGCCCAGATGAGAATTCTCATGTTGCGTGTTACAGAATGGCATTGGCAAAGTTCCCCCCTGTTGATCGAAAGAAATGGTCCATTGTAGAAAGGGAGAATCTAGGGAAGGGAATAAGACAGCAGTTTCAGGAGATGGTGCTTCAGATTTCAGTGGATCAAATCAGTGGGCCACAAGGAGTTTATGGAGATTCAGATGATTTGGATAACATTCTTTCATCAATAAAAGACCTTGACACCCCTCCTGAAAGGATTAGGGAATTTCTGCCAAAAGTTAATTGGGACAAATTGGCTTCCATGTATCTTCAGGGTCGCTCGGGTGCAGAATGTGAAGCAAGGTGGTTGAATTTTGAAGACCCCCTAATTAATCGAGATCCATGGACTACAAGTGAGGATAAAAATCTTTTGTTTACTATCCAACAGAAGGGGTTGAATAACTGGATTGAGATGGCAGTTTCATTGGGCACAAACAGAACTCCTTTTCAGTGCTTGTCTCGGTATCAAAGAAGTTTAAATGCTTCCATATTAAAGAGGGAGTGGACCAAAGATGAGGATGATAAACTTCGAACTGCTGTTGCTATATTTGGTGTGAGAGATTGGCAGGCAGTAGCTTCTACTTTGGAAGGACGAGCTGGCACACAATGCTCTAATAGGTGGAAAAAATCGCTTGACCCAGCTAGGACAAGAAAAGGTTATTTCACTCCAGATGAAGACGTTCGCTTGAAAATTGCTGTACTGCTCTTTGGGCCCAGAAATTGGAACAAGAAAGCAGAATTTTTGCCTGGTCGGAATCAAGTTCAATGCAGAGAAAGATGGTTTAATTGTTTAGATCCTTCCTTGAGAAGATGTGAGTGGACAGAAGAGGAGGATTTAAGGCTGGAGATAGCAATTCAGGAACATGGATATAGCTGGGCTAAGGTAGCTGCATGTGTGCCATCACGTACAGATAATGAGTGTCGGAGGAGATGGAAGAAGTTATTTCCCGATGAAGTTCCTTTGCTCCAGGAAGCTAGAAAGATTCAGAAGGCTGCTCTTATTAGCAACTTTGTTGATAGGGAAACAGAGCGTCCTGCTCTTGGTCCTGCTGACTTTCGACCCAGGCCAAATACAGATTCATTATGTAACACTGATGGTCCAAGACCTGCCCCAAAAAGAAATGTGAAAACGAGAAAGATGCCAGTGTCAAGGAATGAAAAGAGTGCTACTGGTGATGCTCCAAAAAAGAGGAAATCAAATTCTCAGAGGTTTCAGACTGATGGAACTGCTCAGGTGGGTATTGCATATAATACATCTTCTGTCCCAGAAGAGGTTCAATCTTCAAAGCCTCAAAGAAAACGAAATAGACGCGGAGCTTATACTGCAAAGAGAATAGGAGTACCGGAGCTACGTTCTGACAGCGAGTGGTGTGCTAAACAGAATTTGGACACTGAGAGCCTTGGGTTGCAGCTGAATAGTAAGGAATCTGAGAGGAGCAACAGTGACTGCACCAAGACTGTTGATGAGAATATTATGGAAGTTCTTGAGAACAAAGTTGCAGAGAAGCTTACTGAAAAAAATGCATGCTTCTCAGAACCAGAAAAAAATCAAAACTCAACCGGATCTTCTGGAGTCTCGGTATTGTCGGAAATGACTAACGACTTGGTTGACTATAATCCCTCTATCCTCACAGATACAACATTGTTGGCTAGTACTACTGTGGATGATATTGAAGAATTGAAGGGGAAGAGTGCTGCAGACAGGGATTTGGATGACAGTAACAGTTTCTCGTTACCACACAGTTGCTTAGAACTCCGGACAGTTGACAGTGAAGGTGTAGACAGTTATTCTGTGGACGAATATATAGCTAAGAGCAATGGGTTTTGTAATCCCACCCAAGGCAAAAGGAAGAAAAATAGCAAAACATCAAATAACAGCCATGATAATTTGTTTATTCCTTGTCAACAAATTGAGCAAGAGACGTTGGGAACGAAGAAGCCTCATCATCATAATCAATCAAAGAAGAGAAAACATAACAATACAGGTCCAAGTACGTTAAAAACATTGGAGGCAGTTGAGGAGGTTGATGACTGCACTCTCGTGGGGTTCTTGCAAAAACGATTGAAGAGGACGGCAATGACACATAACGAGACAGTTGATTGCAGTTCTAATACTCCTGTAAAAGTTGATAATGACGATAATGAGCCTACCATTGCCTCGTTTCTTAATAAATTGAAGAGAAAAAAGCATCAGCGGCCTAGTGGTGGTGAGTTAAATTAA 3390 43.51 MGIHLPSLLLNAKQIFRTQSVSTRCHSNPLPTLQAPVAASNASRHRLALPPFDRGPSKRIRKVAGNFTLHLSLQSVPSQPRVANLHPAIATAAIRRIPRSPAVASSLPLSPDSLVLVCFTHTAMSLRNHVDEIDIEHPADKEDGVVDEDMEVLQRAYRLVGVNPEDYINQRLSSPAAGDADHGSDSDDVDDFELLRDIQNRFSILADEQPQSTLPPVSADEEEDEFEMLRSIQRRFAAYESDTLRNKPNQSRDYVGSLKMDSDDISVESQTSSKRPSVLAFEKGSLPKAALAFVDAIKKNRSQQKFIRSKMIHLEARIEENKKLRKRCKILKDFQGSCKRRTSCALSQMIDPRVQLISAAKPQAKDSSKKDKRLSGMYYGPDENSHVACYRMALAKFPPVDRKKWSIVERENLGKGIRQQFQEMVLQISVDQISGPQGVYGDSDDLDNILSSIKDLDTPPERIREFLPKVNWDKLASMYLQGRSGAECEARWLNFEDPLINRDPWTTSEDKNLLFTIQQKGLNNWIEMAVSLGTNRTPFQCLSRYQRSLNASILKREWTKDEDDKLRTAVAIFGVRDWQAVASTLEGRAGTQCSNRWKKSLDPARTRKGYFTPDEDVRLKIAVLLFGPRNWNKKAEFLPGRNQVQCRERWFNCLDPSLRRCEWTEEEDLRLEIAIQEHGYSWAKVAACVPSRTDNECRRRWKKLFPDEVPLLQEARKIQKAALISNFVDRETERPALGPADFRPRPNTDSLCNTDGPRPAPKRNVKTRKMPVSRNEKSATGDAPKKRKSNSQRFQTDGTAQVGIAYNTSSVPEEVQSSKPQRKRNRRGAYTAKRIGVPELRSDSEWCAKQNLDTESLGLQLNSKESERSNSDCTKTVDENIMEVLENKVAEKLTEKNACFSEPEKNQNSTGSSGVSVLSEMTNDLVDYNPSILTDTTLLASTTVDDIEELKGKSAADRDLDDSNSFSLPHSCLELRTVDSEGVDSYSVDEYIAKSNGFCNPTQGKRKKNSKTSNNSHDNLFIPCQQIEQETLGTKKPHHHNQSKKRKHNNTGPSTLKTLEAVEEVDDCTLVGFLQKRLKRTAMTHNETVDCSSNTPVKVDNDDNEPTIASFLNKLKRKKHQRPSGGELN* 1130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18822670 18842494 - Chy6G121590.1 Chy06g01631 229340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01631 1129 CDD SANT 557 601 IPR001005 -
Chy06g01631 1129 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 607 654 IPR017930 -
Chy06g01631 1129 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 140 1075 - -
Chy06g01631 1129 Gene3D - 554 604 - -
Chy06g01631 1129 Gene3D - 499 550 - -
Chy06g01631 1129 Gene3D - 662 707 - -
Chy06g01631 1129 ProSiteProfiles Myb-like domain profile. 550 601 IPR001005 -
Chy06g01631 1129 SUPERFAMILY Homeodomain-like 605 701 IPR009057 -
Chy06g01631 1129 CDD SANT 662 705 IPR001005 -
Chy06g01631 1129 MobiDBLite consensus disorder prediction 769 792 - -
Chy06g01631 1129 MobiDBLite consensus disorder prediction 793 816 - -
Chy06g01631 1129 ProSiteProfiles Myb-like domain profile. 655 705 IPR001005 -
Chy06g01631 1129 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 550 605 IPR017930 -
Chy06g01631 1129 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 655 709 IPR017930 -
Chy06g01631 1129 Gene3D - 605 660 - -
Chy06g01631 1129 ProSiteProfiles Myb-like domain profile. 497 549 IPR001005 -
Chy06g01631 1129 Pfam Myb-like DNA-binding domain 555 599 IPR001005 -
Chy06g01631 1129 Pfam Myb-like DNA-binding domain 608 654 IPR001005 -
Chy06g01631 1129 Pfam Myb-like DNA-binding domain 661 704 IPR001005 -
Chy06g01631 1129 Pfam Myb-like DNA-binding domain 502 547 IPR001005 -
Chy06g01631 1129 MobiDBLite consensus disorder prediction 734 830 - -
Chy06g01631 1129 SUPERFAMILY Homeodomain-like 534 604 IPR009057 -
Chy06g01631 1129 MobiDBLite consensus disorder prediction 998 1019 - -
Chy06g01631 1129 ProSiteProfiles Myb-like domain profile. 603 654 IPR001005 -
Chy06g01631 1129 MobiDBLite consensus disorder prediction 1033 1055 - -
Chy06g01631 1129 SUPERFAMILY Homeodomain-like 478 546 IPR009057 -
Chy06g01631 1129 SMART sant 401 498 IPR001005 -
Chy06g01631 1129 SMART sant 501 551 IPR001005 -
Chy06g01631 1129 SMART sant 659 707 IPR001005 -
Chy06g01631 1129 SMART sant 607 656 IPR001005 -
Chy06g01631 1129 SMART sant 554 603 IPR001005 -
Chy06g01631 1129 CDD SANT 611 652 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01631 Chy-Chr6:18822670 Chy04g02148 Chy-Chr4:26662190 1.09E-13 dispersed
Chy06g01631 Chy-Chr6:18822670 Chy03g01233 Chy-Chr3:15434528 4.25E-06 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18198 PF00249 Myb_DNA-binding 3.80E-08 CL0123 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01631 K09422 - csv:101216287 1887.08