Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01649 ATGGCTCTGGTTCTGCATTCTTGGACTCCCAGCAAAAATGTTTACAAGGTTTTAATAGCTGCGGAATACAATGGTGTCAAAGTTAACCTTGCCCCAGACTTCACCATGGGTGTAAGCAATAAGAGTCCTGAATTTCTCAAAATGAATCCTATTGGGAAGGTTCCTCTTCTACAAACACCCGATGGTCCTATCTTTGAGAGCAATGCTATAACCCGCTATGTTGCTCGCTTGAAGGACAGCAGTTTATTTGGCTCTTCTCCAATTGATTATGGACATGTTGAACAATGGATCGATTTCTCTTCGTTGGAAATTGATATTCACATTTCGACTATTCTGGCGTCTAGACTTGGATATGGTGTTTACCATGCTCCTGCAGAAGAAGCTGCAAACGCTGCCCTAAAACGATCTTTCGGTGCTTTGAACTCCTACCTTGCTTCAAACACATTCCTCGTTGGACACTCTGTGACACTGGCTGATATTGTTTTGACTTGCAATCTCTATTATGGATTCGTCTATATTTTGCCTAAGAGCTTTACTTCTGCATTCCCTCATGTCGAGAGGTACTTCTGGACTTTGGTCAATCAACCAAATTTCAAAAAGATAATTGGTGAGGTAAAGCAGACTGACGTTGTCCCACCAGTGAAAACACCTGAAGAGGCTGCCGCAGCTGCCAAAGCAAAGGCTGAACCCAAGAAACAAGAAGAGAAGCCTGCAGCACCTGCTGAGGACGCACCAAAGCCCAAGGCCAAAAATCCTCTTGACTTGCTTCCTCCTAGTTCGATGATTTTGGATGAGTGGAAACGTCTCTACTCGAACACTAAGACTAACTTCCGTGAGGTTGCAATTAAAGGATTCTGGGACATGTATGACCCAGAAGGGTACTCCCTTTGGTTCTGTGACTACAAATACAACAACGAGAATACTGTTTCATTTGTGACTTTGAACAAAGTTGGTGGATTCCTCCAGAGAATGGATATTGCTAGGAAGTACGCATTTGGAAAGATGCTTGTGATCGGATCAGAGGCACCGTACAAGGTGAAGGGACTATGGCTTTTCCGTGGAAAAGAAATCCCACAATTTGTGCTTGATGAGTGCTATGATATGGAGCTGTATGAGTGGAAGAAGGTGGATATCTCGGATGAAGCCCAGAAGGAGAGGGTGAGCCAAATGATTGAAGACCAGGAACCATTTGAGGGTGAAGCTCTTTTGGACGCCAAATGCTTTAAGTGA 1230 43.98 MALVLHSWTPSKNVYKVLIAAEYNGVKVNLAPDFTMGVSNKSPEFLKMNPIGKVPLLQTPDGPIFESNAITRYVARLKDSSLFGSSPIDYGHVEQWIDFSSLEIDIHISTILASRLGYGVYHAPAEEAANAALKRSFGALNSYLASNTFLVGHSVTLADIVLTCNLYYGFVYILPKSFTSAFPHVERYFWTLVNQPNFKKIIGEVKQTDVVPPVKTPEEAAAAAKAKAEPKKQEEKPAAPAEDAPKPKAKNPLDLLPPSSMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNNENTVSFVTLNKVGGFLQRMDIARKYAFGKMLVIGSEAPYKVKGLWLFRGKEIPQFVLDECYDMELYEWKKVDISDEAQKERVSQMIEDQEPFEGEALLDAKCFK* 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 19149029 19151297 + Chy6G121770.1 Chy06g01649 229358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01649 409 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 409 IPR044628 GO:0004364
Chy06g01649 409 MobiDBLite consensus disorder prediction 219 256 - -
Chy06g01649 409 Pfam Glutathione S-transferase, N-terminal domain 2 76 IPR004045 -
Chy06g01649 409 SFLD Glutathione Transferase (cytosolic) 3 189 IPR040079 -
Chy06g01649 409 SFLD Main (cytGST) 3 189 - -
Chy06g01649 409 SMART EF1G_2 248 356 IPR001662 GO:0003746|GO:0006414
Chy06g01649 409 Gene3D - 79 212 - -
Chy06g01649 409 CDD GST_C_EF1Bgamma_like 89 211 - -
Chy06g01649 409 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Chy06g01649 409 SUPERFAMILY GST C-terminal domain-like 73 210 IPR036282 -
Chy06g01649 409 Pfam Glutathione S-transferase, C-terminal domain 123 196 IPR004046 -
Chy06g01649 409 SUPERFAMILY eEF1-gamma domain 250 409 IPR036433 GO:0003746|GO:0006414
Chy06g01649 409 SUPERFAMILY Thioredoxin-like 2 78 IPR036249 -
Chy06g01649 409 CDD GST_N_EF1Bgamma 3 77 - -
Chy06g01649 409 Gene3D Glutaredoxin 1 74 - -
Chy06g01649 409 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 249 409 IPR001662 GO:0003746|GO:0006414
Chy06g01649 409 MobiDBLite consensus disorder prediction 222 249 - -
Chy06g01649 409 Pfam Elongation factor 1 gamma, conserved domain 248 356 IPR001662 GO:0003746|GO:0006414
Chy06g01649 409 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 249 409 IPR036433 GO:0003746|GO:0006414
Chy06g01649 409 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01649 Chy-Chr6:19149029 Chy06g00410 Chy-Chr6:2764519 1.12E-08 dispersed
Chy06g01649 Chy-Chr6:19149029 Chy06g01650 Chy-Chr6:19153125 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01649 K03233 - csv:101207459 756.133