Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01728 ATGGCCGCCACCGCCGCCACCACCACCCTCCTCCGGGCCACCCCTTTTCTCGGCCACACCAGAGCCTCTCCTCAAAACCCCCTCAGAGATGTCGTCGCCATGGGAACTGGAAAATACACCATGAGTAATGATTTGTGGTATGGACCCGATAGAGTTAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCGTACTTGAACGGTGAGTTCCCTGGTGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACCGAGCTCTTGAGGTAATCCACGGAAGGTGGGCAATGTTGGGCGCTTTGGGTTGCATAACACCCGAAGTCTTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTATGGTTCAAGGCAGGAGCCCAAATCTTCACAGAAGGAGGTCTAGACTACTTAGGCAACCCGAACTTGGTCCACGCCCAAAGCATTCTAGCCGTGTTGGGGTTCCAAGTGGTCCTCATGGGTCTAGTAGAAGGGTACCGCATCAACGGCCTCGATGGCGTCGGCGAGGGCAATGACCTCTACCCGGGCGGTCAATACTTTGACCCACTTGGATTGGCTGATGACCCCGTCACCTTCGCAGAGCTGAAGGTGAAGGAGATCAAGAATGGGCGTCTTGCCATGTTTTCCATGTTTGGATTCTTCGTTCAAGCCATTGTGACCGGAAAGGGTCCTCTTGAGAACCTTCTTGACCACCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCCACCAAGTTTGCCCCTGGCTCATAA 795 53.58 MAATAATTTLLRATPFLGHTRASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS* 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 20138010 20139333 - Chy6G122560.1 Chy06g01728 229437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01728 264 Pfam Chlorophyll A-B binding protein 63 230 IPR022796 -
Chy06g01728 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 264 IPR001344 GO:0009765|GO:0016020
Chy06g01728 264 Gene3D Chlorophyll a/b binding protein domain 53 257 - -
Chy06g01728 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 3 264 - -
Chy06g01728 264 SUPERFAMILY Chlorophyll a-b binding protein 45 261 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01728 Chy-Chr6:20138010 Chy11g01011 Chy-Chr11:14276644 2.36E-118 dispersed
Chy06g01728 Chy-Chr6:20138010 Chy02g00166 Chy-Chr2:1171702 7.57E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01728 K08914 - csv:101207278 527.709