Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01739 ATGCCAACAGTTTGGTTGTCCTTGAAGAAATCTTTACACTGTAAATCAGAGCCCTCAGAAGTTCATGACCCGAAAAGTAAAAAGAATTTGGGAGCAATTTTGACAAGAAAAACAGGGGGAGGAGGAAGATCAGGTTGCTCAAGGTCTATAGCAAATCTCAAAGATGTCATCAATGGCGGCAGCAAAAGACATTTGGATAAACCCCCAAGTTGCAGTCCAAGATCCATTGGTAGCAGTGAGTTTCTCAACCCAATAACCCACGAAGTTATTCTCAGCAACTCAAAATGCGAGCTCAAAATCACCGGTTTTCATGGTGGTTTCCCCCAAGATCTTCCTCCTGCCGATATTCACGGCGGCTCTTCCACCTTCGTCGGTACTCTGACACCCGGCACCCCCGGCCCCGGTGGCCACCCATCAATGCATTACTTCAATCCTTCCTTGAGGTCTTCTTCGAAAAAATTCTCTTTTAGAGAGGGGTTTGGTAGCTCTAATAAATCTGGCGGCGGCACTGGCGGAGGAGCCCGCGGCAGTGGAATTTATTTGAGTAATAGAATCTCTTTGGAAACAGAGAATAGTAGGAACGGATGTTCTTCTGCGGTTACTTGCCATAAATGTGGAGAGCAATTCAACAAGTGGGATGCTGCTGAAGCTCATCATCTTTCTAAACATGCTGTGACTGAGCTTGTGGAAGGAGATTCATCAAGAAAAATTGTGGAGATCATATGTAGAACAAGCTGGTTAAAGTCCGAGAATCAAAGTGGAAGAATAGAAAGAGTCTTGAAAGTTCACAATATGCAACGAACCCTAGCTCGTTTCGAAGAGTATCGCGAGACAGTTAAGATCAAAGCCAGCAAGCTCCCAAAGAAGCACCCTCGGTGTCTTGCCGATGGGAACGAGCTCCTACGATTCTACGGCACGACAGTTGGGTGCTTGCTTGGTCTTAATGGCTCATCCAGCCTATGCATATCGGAGAAATGCTGCGTTTGTAGGATCATACGTAACGGGTTCTCAGCAAAGACAGAGATGGAAGAAGGGATAGGGGTGTTCACAACTTCAACGAGCGCAAGAGCATTCAGCTCGATCAAGGGATCGGGAGGGGACGAGGGGATGACGAGGAAGGCGATGATAGTTTGCAGGGTGATTGCAGGGAGGGTTCATAGGCCATTGGAGAACATACAAGAAATGGCTGGGCAAACAGGGTTTGATTCATTAGCAGGGAAAGTTGGGTTGCATTCAAATATAGAAGAACTTTATTTGTTGAATCCTCGAGCTTTGCTTCCATGTTTTGTGGTAATTTGCAAACCATGA 1308 46.18 MPTVWLSLKKSLHCKSEPSEVHDPKSKKNLGAILTRKTGGGGRSGCSRSIANLKDVINGGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSKCELKITGFHGGFPQDLPPADIHGGSSTFVGTLTPGTPGPGGHPSMHYFNPSLRSSSKKFSFREGFGSSNKSGGGTGGGARGSGIYLSNRISLETENSRNGCSSAVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQSGRIERVLKVHNMQRTLARFEEYRETVKIKASKLPKKHPRCLADGNELLRFYGTTVGCLLGLNGSSSLCISEKCCVCRIIRNGFSAKTEMEEGIGVFTTSTSARAFSSIKGSGGDEGMTRKAMIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLHSNIEELYLLNPRALLPCFVVICKP* 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 20242805 20244447 + Chy6G122670.1 Chy06g01739 229448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01739 435 PANTHER - 2 435 - -
Chy06g01739 435 SUPERFAMILY ADP-ribosylation 225 434 - -
Chy06g01739 435 ProSitePatterns Zinc finger C2H2 type domain signature. 202 223 IPR013087 -
Chy06g01739 435 Gene3D - 224 434 - -
Chy06g01739 435 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 435 - -
Chy06g01739 435 MobiDBLite consensus disorder prediction 59 78 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01022 Chy-Chr4:15163880 Chy06g01739 Chy-Chr6:20242805 0 dispersed
Chy06g01739 Chy-Chr6:20242805 Chy09g00586 Chy-Chr9:6787367 2.21E-76 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18201 None None None None Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01739 - - csv:101208986 815.068