Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01797 ATGCAGTTTCCAATGCCACATTTCTTCTCTGTTTCTCTTCTCATTTCCCTTCTTCTTTTTTCCCATTTTTCTCTCTGTTTTTCACAAGATTACATTATTGGCGGTGGTGGTGGCGGCGGCGGCGGCGATGATGATGACGAAGCCAAGCCGGCTGCGCCACCGCCAGAGCAGAATGAATGTAATGGGATATTTTTGTCTTATACGTTTATTTCGCGGGAGAAAGAGCTGCCACGGTTGAAGAATGCCACGGCTCAGGCATGGGCGTTTAAGTCGGAGGCGGTGATTTTGAATGCGGGATCGACGGAGCTAAAGGCATGGAAGATGTTTATTGGATTTCATCACCATGAGATTTTGGTGTCGGCGAATGGTGCGGTGGTGATGGATGGGTCGGATTTCCCTGTGGATGTTGGGAATGGGACTACTTTGGCTGGGTACCCAATGACGGATCTGAAAACGTCGATCGAAACCGCAGGTGATATTAATCAGATTCAGGCGACGGTGGAGTTCACAGGAACGCAATTCGGAATTAAACCGCCGGGTGTTCCGATGCCGAAGACCATTCGTCTTGTGAACGATGGATTTAAATGCCCTGCCCCTCGCCATCGCGGTAAGAGAACAATGCATGTATGCTGCAAAAAGGATCCAAAGTTCAAGGTGAAGAAAGAAAAAAAGACCAAATTTTTCGCTCGCCAAAATGGAGATCTCTCACTCACTTACGATGTAATGCAAGCTTATGGAAATAATTATCTCGCTCAAGTTACAATAGACAACAACAATCCTCTTGGCCGTCTCGATCATTGGAACTTAACTTGGGAATGGATGAGAGGAGAATTCATTCAAAGCATGAGAGGAGCTTACACTCATACGAGAGATTTATCTCAATGCGTTTATGGTACTGCTGGCCAATACTATCAAGATTTCGACTTCTCTCAAGTCATGAGTTGCGATAAGCGACCCGTAATCGCCGACCTTCCCGCCGATCGTATCAATGATGATAAAGTCGGCAAGTTGCCGTATTGTTGTAGGAATGGAAGCTTATTGCCAACATTAATGGATGAGAGTAAAGCAAGGTCTATTTTTCAACTACAAGTCTATAAGCTTCCACCGGATATGAACAGAACCGCACTTAATCCGCCGCAGAAATGGAAGATTTCTGGAGTTCTGAATCCGAAATACGTTTGTGCGGCACCACTCCGAGTTGAACCAACGGAGTTCCCTGACCCGAGTGGACTTCAATCAACGAGTACCGCCATTGCAAGTTGGCAAATTATATGCAACATTACAAGGCCAAAGGTGAAGCAATCAAAATGCTGTGTTTCATTTTCAGCTTATTATAATGACTCTGTTATTCCTTGCAATACTTGTGCTTGTGGGTGTGACGATATTGATACTGACACTTGCAATCCAAATGCACATTCAATGCTCCTCCCTCCAGAAGCACTTTTGGTTCCATTTGCCAACAGGTCAGCGAAAGCTAGAGCTTGGGCTAAAATTAAGCATTACCGAAATCCCAAAAAGCTGCCCTGTCCTGATAATTGTGGGGTTAGCCTAAATTGGCATATCAACTCTGATTATACTAATGGATGGACTGCAAGATTAACACTCTTCAATTGGGAAGATTATCCATTTGAAGATTGGTTTACTGCCATTCAGTTAAACAAGGCCGGTAGGGGTTACGAAAACGTTTATTCCTTCAATGGAACCCGGCTTCCCAACATCAAAAATACAATCTTCCTTCAAGGTTTGCCTGGTTTAGCTTACTTGATGGGAGAGGTTAATGGGACCAATCCTAAAACTGATCCAAGAGTTCCTGGGAAGCAACAATCTGTTATTTCTTTCACCAAGAAGGGTATACGCAACATCGACATACTACGGGGCGATGGTTTCCCGAACAAAGTCTTTTTCAATGGCGAAGAATGTGCGCTTCCAAAGGATATTCCCACGGCAAGTTCAGCCCACCACCGTTCTTACGACGTTTTCATGTCACTTATCTTCATCTTAGCTCTTACTTTCGTGTTTATAACCGATCGCTTCCATTGA 2040 44.51 MQFPMPHFFSVSLLISLLLFSHFSLCFSQDYIIGGGGGGGGGDDDDEAKPAAPPPEQNECNGIFLSYTFISREKELPRLKNATAQAWAFKSEAVILNAGSTELKAWKMFIGFHHHEILVSANGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVEFTGTQFGIKPPGVPMPKTIRLVNDGFKCPAPRHRGKRTMHVCCKKDPKFKVKKEKKTKFFARQNGDLSLTYDVMQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFIQSMRGAYTHTRDLSQCVYGTAGQYYQDFDFSQVMSCDKRPVIADLPADRINDDKVGKLPYCCRNGSLLPTLMDESKARSIFQLQVYKLPPDMNRTALNPPQKWKISGVLNPKYVCAAPLRVEPTEFPDPSGLQSTSTAIASWQIICNITRPKVKQSKCCVSFSAYYNDSVIPCNTCACGCDDIDTDTCNPNAHSMLLPPEALLVPFANRSAKARAWAKIKHYRNPKKLPCPDNCGVSLNWHINSDYTNGWTARLTLFNWEDYPFEDWFTAIQLNKAGRGYENVYSFNGTRLPNIKNTIFLQGLPGLAYLMGEVNGTNPKTDPRVPGKQQSVISFTKKGIRNIDILRGDGFPNKVFFNGEECALPKDIPTASSAHHRSYDVFMSLIFILALTFVFITDRFH* 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 21574943 21577561 + Chy6G123250.1 Chy06g01797 229506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01797 679 Pfam COBRA-like protein 249 428 IPR006918 GO:0010215|GO:0031225
Chy06g01797 679 PANTHER COBRA-LIKE PROTEIN 7 11 678 - -
Chy06g01797 679 MobiDBLite consensus disorder prediction 38 58 - -
Chy06g01797 679 PANTHER COBRA-LIKE PROTEIN 10 11 678 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00985 Chy-Chr4:14478408 Chy06g01797 Chy-Chr6:21574943 0 dispersed
Chy06g00736 Chy-Chr6:5022563 Chy06g01797 Chy-Chr6:21574943 0 dispersed
Chy06g01797 Chy-Chr6:21574943 Chy01g00699 Chy-Chr1:5113736 6.90E-30 dispersed
Chy06g01797 Chy-Chr6:21574943 Chy02g02401 Chy-Chr2:27765988 1.62E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01797 - - csv:101216608 1332.78