Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01802 ATGATCTCTTCTTTAACTCAATCTGCGAAATCCATTAATGGGTCCGACGTGATTCTCCGGCGGAGTTCTCCGGTGCCAATTAGGCGGTTTTCGTGTTCACCTTCATTGCCGGCGCAAAAACCCCACAGCTCTGTTGTGTGTATGAAAAATGCTCTTCATATCTCATCGGTTTCCAATTTTGGGACATTGGGAACTCGGAAGAGTGATTTCAATACGTGCAAAGCGTACGAGGCTGACCGATCGCAGCCGATTGAGTCGAACATTGAACTGACAGTGGCCGACCAGCCGTCTGAGGCGGCGAAGAAGGTGAAGATCGGACTGTATTTTGCTCTTTGGTGGAGTTTGAACGTTGTGTTCAACATTTACAATAAGAAGGTTTTGAATGCGTATCCATATCCATGGCTAACCTCCACACTTTCTCTTGCTGTTGGTTCTCTCATCATGTTAGTCTCTTGGATGGCGAGGATCGCTGAGGCTCCCAAGACTGATTTCGAGTTTTGGAAATCTTTGTTCCCTGTTGCTGTGGCCCACACAATTGGTCATGTAGCTGCAACAGTGAGCATGTCAAAGGTTGCTGTCTCATTCACCCATATTATCAAAAGTGGTGAGCCTGCTTTTAGCGTATTGGTTTCAAGGTTCCTGTTGGGTGAGACTTTTCCTGTTCCTGTCTACCTCTCTCTTCTCCCGATCATCGGTGGTTGTGCTCTTGCTGCCGTGACTGAGCTCAACTTCAATATGATAGGTTTCATGGGAGCCATGATATCAAACTTGGCATTTGTCTTCAGAAACATATTTTCCAAGAAAGGCATGAAGGGGAATTCCGTTAGTGGAATGAACTACTATGCATGTTTGTCTATATTATCCCTGTTGCTACTTACCCCGTTCGCAATTGCTGTCGAAGGACCACAGATGTGGGCTGCAGGATGGAGAACAGCTCTCTCTGAAATTGGACCTAATTTTGTGTGGTGGGTAGCAGCACAGAGTGTCTTCTATCATCTCTACAACCAAGTGTCTTACATGTCGCTGGACGAAATTTCTCCGTTGACGTTCAGCATTGGCAACACGATGAAACGTATATCGGTCATAGTTTCTGCAATAATCATCTTTCGCACGCCTGTCCAACCCGTCAACGCTCTTGGAGCTGCAATCGCGGTTCTTGGAACCTTCTTATATTCACAGGTAACCGACCTCATTCACCATTCAGTTGTCTGCTTGGCCTAA 1221 46.27 MISSLTQSAKSINGSDVILRRSSPVPIRRFSCSPSLPAQKPHSSVVCMKNALHISSVSNFGTLGTRKSDFNTCKAYEADRSQPIESNIELTVADQPSEAAKKVKIGLYFALWWSLNVVFNIYNKKVLNAYPYPWLTSTLSLAVGSLIMLVSWMARIAEAPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGNSVSGMNYYACLSILSLLLLTPFAIAVEGPQMWAAGWRTALSEIGPNFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSAIIIFRTPVQPVNALGAAIAVLGTFLYSQVTDLIHHSVVCLA* 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 21686807 21690023 + Chy6G123300.1 Chy06g01802 229511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01802 406 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 30 393 - -
Chy06g01802 406 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
Chy06g01802 406 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 104 396 IPR004696 GO:0016021|GO:0022857|GO:0055085
Chy06g01802 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 239 - -
Chy06g01802 406 PANTHER SOLUTE CARRIER FAMILY 35 30 393 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00274 Chy-Chr2:1782765 Chy06g01802 Chy-Chr6:21686807 6.42E-66 dispersed
Chy06g01802 Chy-Chr6:21686807 Chy10g01056 Chy-Chr10:15739628 5.72E-75 dispersed
Chy02g01687 Chy-Chr2:16869224 Chy06g01802 Chy-Chr6:21686807 0 transposed
Chy06g00267 Chy-Chr6:1792692 Chy06g01802 Chy-Chr6:21686807 4.82E-99 transposed
Chy02g00387 Chy-Chr2:2470861 Chy06g01802 Chy-Chr6:21686807 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01802 K15283 - csv:101216838 756.133