Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01805 ATGAATTGCTTTCAATGTTGTGGGTCAGAGGAGAAAGTCAATAAAAAGTCTTTGAAAAAGAGCATTAAGGAGTTTGAAGAGACAAAAACTTTAACCTCATTTGCCAACATTTCCTTTAAATCTGATTCTAGTCGGCGAAGGTACATAACTGAGGAGATAAAAAAGTTAGGAAAAGGAAACATCTCTGCTCAAATTTTTACATTTGGTGAGCTATCAACTGCTACAAATAACTTCAACCACGAAAATCTATTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGGCATCATTGAAAGCACAAAACAAGTAACGGCCGTGAAGCAACTTGATCGAAATGGATTTCAAGGAAACAAAGAATTCCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCTAATCTTGTAAATTTGGTTGGTTATTGTGCTGACGGGGATCAGAGGATTTTGGTTTATGAGTACATGGCTAAAGGTTCCTTGGAGGATCATCTTCTTGATATAGCATCAGATAGGCCACCTCTGGACTGGAAGACAAGGATGAAAATTGCCGAAGGAGCAGCAAAAGGACTTGAATACTTACACGAAACCGCTAACCCTCCCGTAATATATCGCGATTTCAAAGCTTCAAACATATTGCTGGATGAGGAATTCAACCCAAAGCTCTCTGATTTTGGTCTTGCAAAGTTAGGTCCTACTGGGGACAAATCTCATGTTTCCACTAGGGTGATGGGAACCTATGGTTACTGTGCTCCTGAATACGCGCTGACTGGACAACTGACGACGAAATCAGATGTCTACAGTTTTGGTGTTGTGTTCCTGGAGATTATAACTGGAAGAAGGGTTATAGACAATGCAAGACCAACAGCAGAACAAAATTTAATTACTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTTACCCTAATGGCAGATCCAAAACTAGAAGGGGATTATCCAGTGAAGGCTCTATATCAAGCTTTGGCAGTGGCAGCCATGTGTTTACAAGAGGAAGCAAATACTCGACCATTGATCAGTGACGTGGTTACAGCTCTTGAATATTTAGCCGCAAACAAGGATGTCGATGCAGATGCAGATTTTAGAGGATTCGATGTTGTGCGCTTTGCTCATAAAGCGTGGATGAAAAAACTAGACAAAAATAAATAA 1167 40.27 MNCFQCCGSEEKVNKKSLKKSIKEFEETKTLTSFANISFKSDSSRRRYITEEIKKLGKGNISAQIFTFGELSTATNNFNHENLLGEGGFGRVYKGIIESTKQVTAVKQLDRNGFQGNKEFLVEVLMLSLLHHPNLVNLVGYCADGDQRILVYEYMAKGSLEDHLLDIASDRPPLDWKTRMKIAEGAAKGLEYLHETANPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEIITGRRVIDNARPTAEQNLITWAQPLFKDRRKFTLMADPKLEGDYPVKALYQALAVAAMCLQEEANTRPLISDVVTALEYLAANKDVDADADFRGFDVVRFAHKAWMKKLDKNK* 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 21715067 21724737 - Chy6G123330.1 Chy06g01805 229514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01805 388 PANTHER OS07G0668900 PROTEIN 3 365 - -
Chy06g01805 388 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 3 365 - -
Chy06g01805 388 Gene3D Phosphorylase Kinase; domain 1 34 154 - -
Chy06g01805 388 SUPERFAMILY Protein kinase-like (PK-like) 62 350 IPR011009 -
Chy06g01805 388 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Chy06g01805 388 Gene3D Transferase(Phosphotransferase) domain 1 155 373 - -
Chy06g01805 388 CDD STKc_IRAK 84 353 - -
Chy06g01805 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Chy06g01805 388 Pfam Protein kinase domain 79 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01805 388 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00271 Chy-Chr2:1771893 Chy06g01805 Chy-Chr6:21715067 6.18E-49 dispersed
Chy06g01805 Chy-Chr6:21715067 Chy11g01816 Chy-Chr11:24519828 1.00E-177 dispersed
Chy12g00836 Chy-Chr12:13639375 Chy06g01805 Chy-Chr6:21715067 4.03E-110 dispersed
Chy06g01805 Chy-Chr6:21715067 Chy04g02100 Chy-Chr4:26381217 3.49E-172 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71342 PF00069 Pkinase 4.60E-47 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01805 - - csv:101212756 709.523