Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01816 ATGATCCACTCTCTCGAACCCAAATTCCACCAAACCCCATTTCCCCTTCTTCGCCGCATCCCCAAATCTCCACACCCCATTTCAATCCGATGCGGCGGCACCATCCGCGAGCTCCGATCTCGACTAGACTCCATCAGAAACACCCAGAAGCTCACCGAAGCCATGAAGCTCGTCGCCGCCGCTAAAGTTCGACGTGCCCAAGAAGCCGTAATCAACAGCCGCCCCTTCTCCCAATCCCTCGCCCAATTTCTCCATTTCATCACCCAACAAATCCAACGAGACGACATTGATTTCCCCTTTCTCAACCCCAGACCCGTCAGAAAAGTCGCCGTCGTCGTCTTCACCGGCGACCGAGGCCTCTGCGGAGGCTTCAACGCTTCAGTAGTGAAAAAAGCCGAGACCCGATTGGCAGAATTGAAAAACCTCAATCTGGGTCACACCGTAATCAGCGTCGGGAAAAAGGGCAACTCCTATTTCCGCCGCCGGTCTGATATTGAAGTCGATCGATTCATCACCGGCGGCGGCGGTGTTTCATTACCCACAGCAAAAGAAGCACAAGCCATAGCAGACATTGTGTTTTCTCTGTTTATCAGCGAAGAAGTAGACAAAGTGGAAGTAATTTACACGAAATTCGTTTCGTTGCTGAAATCTGAGCCTGTGATTGAGACATTGCTGCCATTGTTGGGGGAAGGGGAAGCCATGGGAGATGGTGGGTTTAGATTGACGACGGCGGAGGGGAAATTGACGGTGGAGAGAGAAGGGAAAGGGGGGGAATTAGGGGAAATTTCGCCATTGTTGGAGTTTGAACAAGACCCAGTTCAGATTTTGGATGGGATGATGGCTTTGTATTTGAACAGCCAGATTTTGAGAGCTTTGCAGGAGTCAATGGCGAGTGAAGTTGCGGCGAGGATGAATGCGATGAGTAATGCTTCTGAGAATGCAATGGAATTGAAGAAATCTGTTACAATTGCTTATAATCGAGAGAGACAGGCCAAGATTACTGGGGAGATTTTGGAAATTGTTGCTGGAGCTGACGCTCTTAAGGAATTTTGA 1053 49.76 MIHSLEPKFHQTPFPLLRRIPKSPHPISIRCGGTIRELRSRLDSIRNTQKLTEAMKLVAAAKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGLCGGFNASVVKKAETRLAELKNLNLGHTVISVGKKGNSYFRRRSDIEVDRFITGGGGVSLPTAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIETLLPLLGEGEAMGDGGFRLTTAEGKLTVEREGKGGELGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEVAARMNAMSNASENAMELKKSVTIAYNRERQAKITGEILEIVAGADALKEF* 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 21860343 21861395 + Chy6G123440.1 Chy06g01816 229525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01816 350 Pfam ATP synthase 35 347 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy06g01816 350 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 34 347 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy06g01816 350 Hamap ATP synthase gamma chain [atpG]. 32 347 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy06g01816 350 PRINTS ATP synthase gamma subunit signature 294 313 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy06g01816 350 PRINTS ATP synthase gamma subunit signature 325 346 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy06g01816 350 PRINTS ATP synthase gamma subunit signature 106 125 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy06g01816 350 PRINTS ATP synthase gamma subunit signature 202 219 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy06g01816 350 Gene3D ATP synthase, gamma subunit, helix hairpin domain 255 347 - -
Chy06g01816 350 Gene3D ATP synthase, gamma subunit, helix hairpin domain 33 99 - -
Chy06g01816 350 ProSitePatterns ATP synthase gamma subunit signature. 333 346 IPR023632 -
Chy06g01816 350 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 34 347 IPR035968 GO:0015986|GO:0045261|GO:0046933
Chy06g01816 350 CDD F1-ATPase_gamma 33 344 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy06g01816 350 Gene3D - 100 228 - -
Chy06g01816 350 PANTHER ATP SYNTHASE GAMMA CHAIN, CHLOROPLASTIC-LIKE 9 349 - -
Chy06g01816 350 PANTHER ATP SYNTHASE GAMMA CHAIN 9 349 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01816 Chy-Chr6:21860343 Chy12g01065 Chy-Chr12:15792888 6.37E-156 dispersed
Chy06g01816 Chy-Chr6:21860343 Chy02g00399 Chy-Chr2:2536085 2.45E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01816 K02115 - csv:101214682 657.907