Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01817 ATGTTGGGTGCGTTCATTTTACCACAAGCAAATTACATGGTTGATCTAGACGTCCAGATTCCAAGTGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACAACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTCAAGGACCTGAAGAAGGACTTCTGTTGCAATGGGAATGTTGTGCAGGACAAAGAGCTGGGGAAGATAATCCAGCTCCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCCGGGCTTGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA 375 45.87 MLGAFILPQANYMVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF* 125
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 21865087 21866386 + Chy6G123450.1 Chy06g01817 229526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01817 124 CDD eIF1_SUI1 40 123 IPR005874 GO:0003743
Chy06g01817 124 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 17 124 IPR005874 GO:0003743
Chy06g01817 124 SUPERFAMILY eIF1-like 12 124 IPR036877 GO:0003743|GO:0006413
Chy06g01817 124 Gene3D - 8 124 - -
Chy06g01817 124 PIRSF Transl_init_SUI1_Euk 13 124 IPR005874 GO:0003743
Chy06g01817 124 PANTHER BNAA10G09260D PROTEIN 13 124 - -
Chy06g01817 124 Pfam Translation initiation factor SUI1 39 112 IPR001950 GO:0003743|GO:0006413
Chy06g01817 124 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 13 124 - -
Chy06g01817 124 ProSiteProfiles Translation initiation factor SUI1 family profile. 42 112 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00417 Chy-Chr1:2935645 Chy06g01817 Chy-Chr6:21865087 4.78E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01817 K03113 - csv:101214921 229.18