Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01871 ATGAAGTCGAATCCAACAGGATCAATGGAAACTGGTTTCTTGGGAAACCTTTCTTCTTCTTCCTTTCGAAATTTTCTTCCGCGATCCATCTCTTCTAAGAAAAGCCTCATTTCCTCCATTTCTAAGAAAACCCACAAATCTAACTCTGAAAATACACCTCCAGTTCACCCTAACATTCCCCTTAATGACCATCAAATACCCATTTCTAAGTCCCCCTTCGATTCCAATCTCGATCTCTCTGTATCGCAATCTCTTAGTTTGAAGGATGAAGTTGTTCAATCGGACAATCAGTTTGAAGTTCCTAACCCGCCTGATCCACCCATCAAGGTTGTTGTGAGGATTAGACCTAATGATAGAGAGAATGAAGTGGAAAGGACGGTTAAGAGGATTTCTTCAGATGAATTGACGTTTGGGGACCGGAAATTTTCGTTTGATTCAGTTTTCGATTCAGATTCGAAACAGGAAGATGTCTTTTCGAAGATTGGAATTCCGCTAGTCAAAGATGCATTGGCTGGTTATAATACTTCTATCATGTCATTTGGTCAGACGGGAAGTGGTAAGACATTCACAATGTGGGGTCCCCCAAGTGCCATGGTTGAAGATCCTTCACCCCTTAGTAACCAAGGTCTTGCGCCTCGCATCTTCCAAATGCTGTTTTCAGAGATTCAAAAGGAACAAGAAAACTCTGAAGGAAAATTGATAAATTATCAGTGTCGTTGCTCTTTTGTAGAGATATTTAATGAACAAATTGGGGATTTGCTTGATCCTACACAGAGGAACCTTAAGATAAAGGATGATGCGAAGAATGGATTGTATGTGGAGAATGTTACAGAGGAATACGTGACAAGTTATGATGATGTGACTCAGATTCTTATCAAGGGACTTTCGAGTAGAAAAGTTGGAGCAACCACTATAAATTCTAAGAGCTCTAGGTCTCATATTGTGTTTACTTTCATCATTGAGTCATGGTGCAAGGAAACATCATCCAAGTGTTTTGGTAGTTCAAAGACAAGCAGAATCAGCCTTGTTGATCTTGCTGGATTAGATAGGAATGTAACCGATGCCACAGGCAGACAATCCACAAGAGAAGGAAAGAATTTGAAGAAGTCTATGACACGGCTCGGGCATTTGGTCGATTCATTATCTAAAGAAACCGAAAGACCATCAGAAGATCGTTTGTACAGAGGTTCCTGCTTGACCCATTTACTAAGAGAGTCATTGGGCGGAAATGCTAAGCTCACAGTTATTTGTGCTATCTCTCCAGATAACAACCATTCAGGTGAGACATTAAGGACGTTAAGATTCGGACAACGATTGAAATCCATAAAGAATCAGCCAATCATAAATGAAATAAAGGAAGATGACGTAAATGATCTGAGTGATCAAATTCGTCAACTAAAGGAAGAACTTATAAGAGCAAATGCCAACTCAGGGAAGTCAGTTCGAAAGACTGGTTACTTTCAAGGGCCTAATGTAAGAGACAGCCTGAATCATTTAAGAGTTAGTATCAATCGCTCTCTGATTTTGCCATGCATTGATAACGATTCGGACGAAGAGGTTAATTGTAATGAGGAAGATGTGAGGGAGTTGCATCAGCAACTGGATAAGGCCCACAGCTTTTCTGAAGAGAACTCGGATAAAAGAGATTCACTTCACTTTTCTTCTGTAGGAGAAAGTTTTGCTTCATATTCAATGAGTGATGATGAAGTAAGTTATCCCCACACAATGGAAGAAATAAACCCTGTAGAACATCATGATGAAAATTTTCATGAGGACAAGATTATTTTAACAGATAATCTTAGTAGCCATGATTCCAAGGTTCCTGATCCAGTGAATAGAAGGAGTATCTCTGTCAGCTCATTCTATCACTTCCCTAATCTTGAAGATCCACCCTTGTCTGAGTCTCCAAAAATTGGAAATTCTCAAAGGAAAAGTTTGGCTGTTGCACCAAGTTTTGCAGACCATCATGGAAGTAAGATGGCAGACAGCTTTAAGTTTAACAAAGATGTACTGAGGCAGTCACTGAGTCAGAGTAAAAGTATCAGATCCTCGTTGCGATCGAGCAATAATTTCGAAGATCCTACTGAGTCATTGGCAGCTAGTCTTCAAAGGGGTTTAAAGATAATTGATTATCACCAGCAAAGCTCAGCAATAAACAAATCTTCAGTATCCTTCTCCTTTGAACACCTGGCTCGAAAATCATGTCCAGAAGTCAACAAAGCTGTAGGGTCTCTTCAAACACTTGAAGAAGATAATGCTGTTGCCATATCTTCTCCCCATCAGCTTTGTGTATCTTGCAAAAGAAAAATTACCGAGAACGACACTAGTGAAGTGCCGAGTAGCAACAACGAACTTGTAGCAGTTAACCAATCCAGGAATCTCAAAGCCATTGTCGGACTCAACCACGTAGACGATCTTGAAAAGGAGAGTGTACAAGAGAAATGTGAAATAAAGGAAATGCAAGAAGCTCAGAACAATGAAAATTGCTTTACTGATGTGTCTGAGAAGGAAGAACTTCTTAATGAAATTCAAAATCTAAGGAGTAAGCTGCAAACATTTGCTGATGTTTCGGCTAACAAGTCAACTGACAAGCTGAGATCCTCGCTACTGCTGTCACGCTCGATCCACCTCAGAAAAAGCTGCCTAGGAGGAGGAGGAGGTTCCCAAACTACTACTAACGAGGCGGAACTTGAAAAGGAAAGGGAGAGATGGACTGAAATGGAGAGTGAGTGGATTTCTTTAACTGATGAACTGAGAGTTGATTTGGAATCCATTCGACAGCGTGCGGAGAAGGTGGAGCAGGAACTGAACACAGAGAAGAAGTGCAATGAGGAGTTGGAGGATGCACTTCACAGATCTGTTCTTGGACATGCTAGATTTGTTGAGCATTATGCTGAATTGCAAGAGAAGTATAATGAGTTGGTTGGTAAGCACCGTGCCATCATGGGTGGAATAGCTGAGGTGAAAAGGGCTGCACAAAAAGCTGGTTCCAAAGGCAACGGTTCTCGGTTTTCGAAATCGCTTGCTGCTGAGCTTTCAGCTCTGAGATTTGAGAGAGACAGAGAGAGAGAATTCTTGAAAAAGGAAAACAAAAGCCTTAAGCTCCAACTTAGAGACACTGCTGAAGCTGTTCATGCTGCTGGGGAACTTCTCGTAAGACTTAGAGAAGCAGAACATTCAGCATCAGTTGCAGAGGAGAGTTTTACATCAGTTCAACAAGAGAACGAGAAGTTGAAGAAGCAAATGGAGAAGCTCAAAAGAAAACATAAAATGGAGATGATTACAATGAAGCAGTACCTTGCAGAGAGCAAACTGCCAGCTTCAGCTCTCGAACCACTGTATCACGACGATCACGACGATGTCGGAACCAACCAGAGAGCCTCGTATGTGGACGATGATCAAGCCTGGAGATCAGAATTTGGAGCTATATATCAAGAGCAGCACTATTAA 3450 41.19 MKSNPTGSMETGFLGNLSSSSFRNFLPRSISSKKSLISSISKKTHKSNSENTPPVHPNIPLNDHQIPISKSPFDSNLDLSVSQSLSLKDEVVQSDNQFEVPNPPDPPIKVVVRIRPNDRENEVERTVKRISSDELTFGDRKFSFDSVFDSDSKQEDVFSKIGIPLVKDALAGYNTSIMSFGQTGSGKTFTMWGPPSAMVEDPSPLSNQGLAPRIFQMLFSEIQKEQENSEGKLINYQCRCSFVEIFNEQIGDLLDPTQRNLKIKDDAKNGLYVENVTEEYVTSYDDVTQILIKGLSSRKVGATTINSKSSRSHIVFTFIIESWCKETSSKCFGSSKTSRISLVDLAGLDRNVTDATGRQSTREGKNLKKSMTRLGHLVDSLSKETERPSEDRLYRGSCLTHLLRESLGGNAKLTVICAISPDNNHSGETLRTLRFGQRLKSIKNQPIINEIKEDDVNDLSDQIRQLKEELIRANANSGKSVRKTGYFQGPNVRDSLNHLRVSINRSLILPCIDNDSDEEVNCNEEDVRELHQQLDKAHSFSEENSDKRDSLHFSSVGESFASYSMSDDEVSYPHTMEEINPVEHHDENFHEDKIILTDNLSSHDSKVPDPVNRRSISVSSFYHFPNLEDPPLSESPKIGNSQRKSLAVAPSFADHHGSKMADSFKFNKDVLRQSLSQSKSIRSSLRSSNNFEDPTESLAASLQRGLKIIDYHQQSSAINKSSVSFSFEHLARKSCPEVNKAVGSLQTLEEDNAVAISSPHQLCVSCKRKITENDTSEVPSSNNELVAVNQSRNLKAIVGLNHVDDLEKESVQEKCEIKEMQEAQNNENCFTDVSEKEELLNEIQNLRSKLQTFADVSANKSTDKLRSSLLLSRSIHLRKSCLGGGGGSQTTTNEAELEKERERWTEMESEWISLTDELRVDLESIRQRAEKVEQELNTEKKCNEELEDALHRSVLGHARFVEHYAELQEKYNELVGKHRAIMGGIAEVKRAAQKAGSKGNGSRFSKSLAAELSALRFERDREREFLKKENKSLKLQLRDTAEAVHAAGELLVRLREAEHSASVAEESFTSVQQENEKLKKQMEKLKRKHKMEMITMKQYLAESKLPASALEPLYHDDHDDVGTNQRASYVDDDQAWRSEFGAIYQEQHY* 1150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22580639 22586538 - Chy6G123990.1 Chy06g01871 229580

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01871 1149 MobiDBLite consensus disorder prediction 36 67 - -
Chy06g01871 1149 Coils Coil 1061 1095 - -
Chy06g01871 1149 PRINTS Kinesin heavy chain signature 303 320 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy06g01871 1149 PRINTS Kinesin heavy chain signature 339 357 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy06g01871 1149 PRINTS Kinesin heavy chain signature 172 193 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy06g01871 1149 PRINTS Kinesin heavy chain signature 392 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy06g01871 1149 Coils Coil 1023 1043 - -
Chy06g01871 1149 MobiDBLite consensus disorder prediction 677 696 - -
Chy06g01871 1149 Coils Coil 449 476 - -
Chy06g01871 1149 ProSiteProfiles Kinesin motor domain profile. 107 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy06g01871 1149 PANTHER KINESIN-LIKE PROTEIN KIN-12F 802 1147 - -
Chy06g01871 1149 SMART kinesin_4 105 450 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy06g01871 1149 Coils Coil 803 823 - -
Chy06g01871 1149 PANTHER CENTROMERE PROTEIN E 802 1147 - -
Chy06g01871 1149 PANTHER KINESIN-LIKE PROTEIN KIN-12F 76 794 - -
Chy06g01871 1149 Gene3D Kinesin motor domain 105 483 IPR036961 -
Chy06g01871 1149 Coils Coil 836 856 - -
Chy06g01871 1149 Pfam Kinesin motor domain 122 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy06g01871 1149 MobiDBLite consensus disorder prediction 1 22 - -
Chy06g01871 1149 PANTHER CENTROMERE PROTEIN E 76 794 - -
Chy06g01871 1149 Coils Coil 915 949 - -
Chy06g01871 1149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 475 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01871 K10400 KIF15; kinesin family member 15 - csv:101203593 2107.41
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00830 Chy-Chr6:5874186 Chy06g01871 Chy-Chr6:22580639 2.58E-76 dispersed
Chy06g01871 Chy-Chr6:22580639 Chy11g00430 Chy-Chr11:4151148 8.37E-81 dispersed
Chy06g01871 Chy-Chr6:22580639 Chy12g00148 Chy-Chr12:1669469 1.03E-53 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g604 . . . . Bpe09g00138 . Bma10g00586 Bma13g01105 Cmo16g00977 . . . . . . . . . . . . . . . Cla10g00437 Cam10g0436 Cec10g0458 Cco10g0447 Clacu10g0444 Cmu10g1275 Cre10g0691 . . Cone14ag1198 Cone15ag1218 . Csa03g00446 . Cme06g02803 Blo07g00875 . Bda05g00688 . . Bpe03g00762 . . . . . . Cma16g00939 . Car16g00903 Cpe14g00763 . Bhi11g00510 . . . . . . . . . . . . . Lsi05g00529 . Chy06g01871 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004807 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 0 4 1 1 40