Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy06g01875 | ATGCCTAGTGTAATGACAGAGTCATCAGATAAAGAGACGGAGGCATTTGTAGAGGTAGATCCAACGTGCCGATATGGGCGTTATCCCGAGCTTCTGGGAACAGGGGCGGTAAAGAAAGTGTACAGAGCATTTGATCAAGAAGAAGGAATAGAGGTAGCTTGGAACCAAGTGAAATTAAGGAGTTTTTCAAATGATCCATCCATGATAGATAGGTTATATTCAGAGGTGAGATTGTTAAGAAGCTTAAAGAACAACAACATAATTGCCTTGTATGATGTTTGGCTTGACAAACTTCATGGAACCTTAAATTTCATTACTGAGGTTTGTACAAGTGGGAACCTTAGAGAGTACAGGAAGAAACATAGACAAGTCTCTTTGAAAGCTTTGAAGAAATGGTCCAAACAAATCCTCAAGGGTTTGCATTATTTGCATTCTAATGACCCTTGTGTAATTCATAGAGATCTCAATTGTAGCAACCTCTTTGTCAATGGCAATGTTGGTCAGGTAAAGATTGGTGACTTGGGTTTGGCAGCAACAGTAAGAAAGAATCACTCAGCTCATTCAGTGCTTGGAACACCAGAATTCATGGCACCTGAGTTATATGAAGAGCATTACACTGAGCTTGTGGATATATATTCATTTGGAATGTGTTTGCTTGAATTAGTGACTCTGGAAATTCCCTATAGTGAATGTGACAATGTTGCCAAAATCTACAAGAAAGTCTCCTCAGGCATCAAGCCTCAAGCCCTTGGCAAGGTCAAGGACCCTGAAGTCAAGGCTTTCATTGAGAATTGCCTTGCCGAATCCAAAGTCCGGCCTTCAGCCGCCGACCTCCTCCGCCACCCCTTTTTCAGAGAAATTGATGATGACGAAAACGAAGACGACAATAACGATCATTAG | 900 | 41.44 | MPSVMTESSDKETEAFVEVDPTCRYGRYPELLGTGAVKKVYRAFDQEEGIEVAWNQVKLRSFSNDPSMIDRLYSEVRLLRSLKNNNIIALYDVWLDKLHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWSKQILKGLHYLHSNDPCVIHRDLNCSNLFVNGNVGQVKIGDLGLAATVRKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYKKVSSGIKPQALGKVKDPEVKAFIENCLAESKVRPSAADLLRHPFFREIDDDENEDDNNDH* | 300 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 22611055 | 22612744 | - | Chy6G124030.1 | Chy06g01875 | 229584 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy06g01875 | 299 | Gene3D | Transferase(Phosphotransferase) domain 1 | 109 | 290 | - | - | |
| Chy06g01875 | 299 | CDD | STKc_WNK | 24 | 284 | - | - | |
| Chy06g01875 | 299 | Pfam | Protein kinase domain | 30 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Chy06g01875 | 299 | SUPERFAMILY | Protein kinase-like (PK-like) | 30 | 291 | IPR011009 | - | |
| Chy06g01875 | 299 | ProSiteProfiles | Protein kinase domain profile. | 26 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Chy06g01875 | 299 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 1 | 298 | - | - | |
| Chy06g01875 | 299 | PANTHER | SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN | 1 | 298 | - | - | |
| Chy06g01875 | 299 | Gene3D | Phosphorylase Kinase; domain 1 | 9 | 107 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy06g01875 | Chy-Chr6:22611055 | Chy11g00699 | Chy-Chr11:8859249 | 7.68E-162 | dispersed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 71344 | PF00069 | Pkinase | 4.50E-51 | CL0016 | Chy | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy06g01875 | K08867 | - | csv:101221172 | 583.563 |