Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01877 ATGAAGGAACCTTCACGAAAGAAAGTTCCAAATCAATCTTATGGGTTCTGTGAACAACCACTGCAAGAACCCGGGTCCTGTTACTGGCCTCCTATCAACCATGGAGGTGGTCTGTATTCTGACGATGTATTAGATCAAAATCACTTACCCTCTGAGTCTTTCAAACAGTATTGCAACCTTGAGTCGTCCTCGGGAACTAGTAGTTACCCACATCAAAATTCGTCCTCCACTGCTAGCTTGACATCAATTGGAAGCCCTTCCTCACATCAAGAGTGCCATTCATACCCTATAGACCCGTATTATTCTCCCGACAATAACTGTGGCTCACCTATCAGTAGATCTTGTTTAACGGACGATGCTGCTGATGACTTAAGGCACAAGATCAGGGAATTGGAAACTGCAATGCTTGGACCTGATGCAGATGGGCTTGACGTCTATTCTATCACTGAACCAATTCATCCTCTATTACCCGTGCAAGATGCAGGGTGGAAAGATGTGGCTGAGATAATCTCTAGAAGGGATTTGAAAGAGATGCTTTGTGCTTGTGCACGAGCAATAGATGAGAACGATATGTTGACTGGAGAATGGTTGGTGTCAGAGTTACGTGGAATGGTCTCAGTTTCTGGTGAGCCGATTCAACGTTTAGGGGCTTACTTGTTAGAGGCACTTGTTGCAAGGACAGCATGTTCAGGTAGTTCTATCTACAAAGCCCTAAGATGTAAAGAGCCTATAGGTGCTGAACTGCTCTCATACATGCATGTTCTATATGAAATTTGCCCTTATTTCAAGTTTGGGTACCTTTCAGCAAATGGGGCAATTGCTGAAGCTATAAAAGGTGAAAATAGAGTTCACATAATTGATTTTCAGATAGCTCAGGGAAACCAATGGATCACGTTGTTGCAAGCTCTCGCCAATCGGCCTGGAGGGCCCCCAAAGGTTACTATTACAGGCATAGATGATTCCACTTCAGCTTTCGCTCGAGGAGGGGGGCTTGAGATTGTCAGAAAAAGGTTGTCGATTTTAGCGGAGTCATTAAAGATACCCTTTGAGTTCCATGGAATTGCAGGCTCTGCTTCTGAGATTCAACGTGAAGATCTAAAAGTTCAACCCGGTGAAGCAATTGCTGTGAGTTTTTCCTTGGTGCTGCACCATATGCCAGATGAAAATGTTGGCAGTCAGAATCACCGGGATCGAATTCTGCAGCTGGTCAAGAGCTTGTCCCCAAAAGTCGTGACGGTTGTCGAGCTCGAGTCAAACAACAATACAGCACCCTTTTTATCTCGTTTCCTCCAGACATTAAAGTATTATACTGCTGTTTTTGAATCCATAGATGTGACACTTCCAAGAGATCACAAGGAGCGAATCAGTGTGGAGCAACACTGTTTAGCTCGAGACATCGTAAATTTAGTAGCATGTGAGGGAACTGAAAGAGTCGAACGTCATGAACTTTTCAGGAAGTGGAGATCACGGTTATTCATGGCTGGGTTTAAGCCACACCCTTTAAGCCCTTTTGTCAATTCTACTATTGAGGCACTGCTAAAGAACTACTGTGACAAGTACACACTTGAAGAAAAGGATGGAGCTCTATATCTTGGGTGGTTGAACCAAAATTTGGTTACCTCTAGTGCTTGGATTTGA 1638 43.96 MKEPSRKKVPNQSYGFCEQPLQEPGSCYWPPINHGGGLYSDDVLDQNHLPSESFKQYCNLESSSGTSSYPHQNSSSTASLTSIGSPSSHQECHSYPIDPYYSPDNNCGSPISRSCLTDDAADDLRHKIRELETAMLGPDADGLDVYSITEPIHPLLPVQDAGWKDVAEIISRRDLKEMLCACARAIDENDMLTGEWLVSELRGMVSVSGEPIQRLGAYLLEALVARTACSGSSIYKALRCKEPIGAELLSYMHVLYEICPYFKFGYLSANGAIAEAIKGENRVHIIDFQIAQGNQWITLLQALANRPGGPPKVTITGIDDSTSAFARGGGLEIVRKRLSILAESLKIPFEFHGIAGSASEIQREDLKVQPGEAIAVSFSLVLHHMPDENVGSQNHRDRILQLVKSLSPKVVTVVELESNNNTAPFLSRFLQTLKYYTAVFESIDVTLPRDHKERISVEQHCLARDIVNLVACEGTERVERHELFRKWRSRLFMAGFKPHPLSPFVNSTIEALLKNYCDKYTLEEKDGALYLGWLNQNLVTSSAWI* 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22636667 22638304 - Chy6G124050.1 Chy06g01877 229586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01877 545 Pfam GRAS domain family 176 544 IPR005202 -
Chy06g01877 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 544 IPR005202 -
Chy06g01877 545 PANTHER GIBBERELLIN-RESPONSIVE PROTEIN, PUTATIVE-RELATED 17 544 - -
Chy06g01877 545 MobiDBLite consensus disorder prediction 65 90 - -
Chy06g01877 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01026 Chy-Chr4:15263883 Chy06g01877 Chy-Chr6:22636667 1.16E-174 dispersed
Chy06g01877 Chy-Chr6:22636667 Chy11g00700 Chy-Chr11:8882365 0 dispersed
Chy06g01877 Chy-Chr6:22636667 Chy04g02153 Chy-Chr4:26695033 1.54E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18208 PF03514 GRAS 1.10E-127 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01877 - - csv:101220072 1095.49