Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01911 ATGGCTTCCTCCGACAACGACACCGCCGTCGAACAGCACCAACATTATGCTTACGCAGCACAGGTCGTTACCTTATCAGTCCTACCCATGACACTCCAAGCAGTGTTCGAGCTTGGTGTGTTCGAGATCTTGGCAAAGGCTGGGGATGGGGCCAAGCTCTCTCCAGCAGAGATAGCGGCTGAGATAACCACGACAAACCCCGACGCAGCATTGATGCTTGATCGGATGTTGAGGCTTTTGGCATGCCACTCGGTGGTGGGATGCTCTATAGCGTCTAATAAAGATGGGAATGTGCAAAGGCTTTATAGCCTAACTCCGATTTCTAAATATTATGTTCGAAATGAAGATGGTGTTTCGTTGGGTCCAACTTTATCGTTGATTCAAGATAAAGTGTTTCTGCAAAGCTGGAGTGAGTTGAAGAATGCAGTGATTGATGGAGGAGTTCCTTTCGATCGAGCTCATGGAGGAGTTCATGCATTTGAATACCCTAAGTTGGATCCAAGATTCAACCAAGTATTTAACATTGCAATGATAAATCACACTACAATGTCCATAAAGAAAATTGTGGAATCATACAAAGGTTTTGCAAACATCAAGCAATTAGTTGATGTTGGTGGTGGCCTTGGGGTCACCCTTCAAATCATCACTTCTACCTATCCTTCCATCAAAGGCATCAATTTCGACTTACCTCATGTCATTCGTGATGCCCCTTCTTATAATGGGGTAGAACATGTGGGAGGAGACATGTTTGAGAATGTTCCAAATGGAGATGCTATTTTCATGAAGTGGATACTACATGATTGGAGCGACGATCATTGTGCAAAGTTACTGAAAAATTGCTATAATGCAATTCCAGATGATGGAAAGATAATCATAGTTGACAGTGTGATTCCTACAGAGCCTGAAACCACAAATGTAACAAAGGCAACAGCTCAAGGTGATGTGCTTATGATGACTCAAAATCCAGGAGGAAAGGAAAGAACTAGAGATGAATTTAAGGCCCTAGCAACCAAAGCTGGGTTTAAACATGTCATATTCCAATGTTTTGTATCTAATCTTTGGGTTATAGAGTTTCTTAAAAATTAA 1086 42.17 MASSDNDTAVEQHQHYAYAAQVVTLSVLPMTLQAVFELGVFEILAKAGDGAKLSPAEIAAEITTTNPDAALMLDRMLRLLACHSVVGCSIASNKDGNVQRLYSLTPISKYYVRNEDGVSLGPTLSLIQDKVFLQSWSELKNAVIDGGVPFDRAHGGVHAFEYPKLDPRFNQVFNIAMINHTTMSIKKIVESYKGFANIKQLVDVGGGLGVTLQIITSTYPSIKGINFDLPHVIRDAPSYNGVEHVGGDMFENVPNGDAIFMKWILHDWSDDHCAKLLKNCYNAIPDDGKIIIVDSVIPTEPETTNVTKATAQGDVLMMTQNPGGKERTRDEFKALATKAGFKHVIFQCFVSNLWVIEFLKN* 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22988370 22997848 + Chy6G124390.1 Chy06g01911 229620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01911 361 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 13 359 - -
Chy06g01911 361 PANTHER O-METHYLTRANSFERASE 13 359 IPR016461 GO:0008168
Chy06g01911 361 Pfam O-methyltransferase domain 136 342 IPR001077 GO:0008171
Chy06g01911 361 Gene3D - 2 111 IPR036388 -
Chy06g01911 361 SUPERFAMILY Winged helix DNA-binding domain 12 114 IPR036390 -
Chy06g01911 361 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Chy06g01911 361 Coils Coil 356 361 - -
Chy06g01911 361 Pfam Dimerisation domain 30 81 IPR012967 GO:0046983
Chy06g01911 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 360 IPR016461 GO:0008168
Chy06g01911 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 358 IPR029063 -
Chy06g01911 361 Gene3D Vaccinia Virus protein VP39 112 360 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01909 Chy-Chr6:22942554 Chy06g01911 Chy-Chr6:22988370 1.04E-48 dispersed
Chy06g01911 Chy-Chr6:22988370 Chy11g01159 Chy-Chr11:17614016 1.69E-58 dispersed
Chy06g01910 Chy-Chr6:22978275 Chy06g01911 Chy-Chr6:22988370 0 tandem
Chy06g01911 Chy-Chr6:22988370 Chy06g01912 Chy-Chr6:23020931 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01911 K13066 - csv:101214916 671.003