Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01912 ATGGCTTCCACGGCAGAGGAAACAACCATCACTTCCTTCGGCGAAGATGACGACATCGTCATGGAACAACAACACTATGCTTATGCTATGGAACTGGCTACCTTATCGGTGGTGCCGATGACACTCCAAGCAGCCTTTGAACTCGGCGTGTTTGAGATCTTGGCTAAGGCCGGGAACGGGGCCGAGCTCTCTTCGACAGAGATAGCGGCTAAAATAACCACAACAAACCCAGAAGCGTCGTTGATGATTGATAGAATATTGAGGCTTCTAGCAAGCCACGCTGTCGTGGGATGCTCTTTGGCTTCTGATGAAGATGGGAATGTGCAAAGACTTTATAGCCTTACGCCAGTTTCTAAGTATTATGTTCGTAACGAAGACGGTGTCTCTTTAGGTCCACTTTTAACACTGCTTCAAGATAAAGTCCTTCTGCATACATGGACTGAGCTGAAGAATACAGTTATTGAAGGAGGAAGTACTACTTTCACGAAGACTTATGGGGGATTGAATGCCTTTCAATACCTTGGCATAGATTCTAGATTTAACCAAGTTTTTAACATTGCAATGATAAATCATTCCACTATGCCCATCAAGAAAATTGTCAAAGCCTACAAAGGCTTTGCAACCATCAAGCAACTAGTTGATGTTGGTGGTGGCCTTGGGGTCACCCTTCAACTCATCACTTCTATGTACCCTTATATCAAAGGCATCAACTATGACTTACCTCACGTCATTCGCAATGCCCCTCCCTATCCAGGTGTGGAACATGTGGGAGGAGACATGTTTGAGAAAATTCCAAATGGAGATGCTGTTTTCATGAAGTGGATACTACACGATTGGAGTGACGATCATTGCATAACGTTGTTGAAAAATTGCTACAATGCAATTCCAGATGATGGAAAGGTAATCGCTGTGGACTCAATACTTCCAACATTACCCGAGACCACAAGTGCAACAAAAGCTGTTGCCCAATGTGATATGGTTGAGATGACTCTATATGAAGGAGGCAAAGAAAGAACTAGAGATGAATTCAAGGCCCTTGCAGCCAAAGCTGGCTTTAAACGTGTCATATTTCAATGTCTTGTGGCTAATCTTTGGGTTACTGAATTTCTTAAAAATTGA 1119 43.25 MASTAEETTITSFGEDDDIVMEQQHYAYAMELATLSVVPMTLQAAFELGVFEILAKAGNGAELSSTEIAAKITTTNPEASLMIDRILRLLASHAVVGCSLASDEDGNVQRLYSLTPVSKYYVRNEDGVSLGPLLTLLQDKVLLHTWTELKNTVIEGGSTTFTKTYGGLNAFQYLGIDSRFNQVFNIAMINHSTMPIKKIVKAYKGFATIKQLVDVGGGLGVTLQLITSMYPYIKGINYDLPHVIRNAPPYPGVEHVGGDMFEKIPNGDAVFMKWILHDWSDDHCITLLKNCYNAIPDDGKVIAVDSILPTLPETTSATKAVAQCDMVEMTLYEGGKERTRDEFKALAAKAGFKRVIFQCLVANLWVTEFLKN* 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23020931 23024482 + Chy6G124400.1 Chy06g01912 229621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01912 372 PANTHER O-METHYLTRANSFERASE 25 370 IPR016461 GO:0008168
Chy06g01912 372 Gene3D - 10 121 IPR036388 -
Chy06g01912 372 PIRSF O-mtase 7 371 IPR016461 GO:0008168
Chy06g01912 372 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 25 370 - -
Chy06g01912 372 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Chy06g01912 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 371 IPR016461 GO:0008168
Chy06g01912 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 366 IPR029063 -
Chy06g01912 372 Pfam O-methyltransferase domain 146 353 IPR001077 GO:0008171
Chy06g01912 372 Gene3D Vaccinia Virus protein VP39 122 371 IPR029063 -
Chy06g01912 372 SUPERFAMILY Winged helix DNA-binding domain 23 124 IPR036390 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01991 Chy-Chr4:25739079 Chy06g01912 Chy-Chr6:23020931 2.03E-68 dispersed
Chy06g01910 Chy-Chr6:22978275 Chy06g01912 Chy-Chr6:23020931 2.43E-176 dispersed
Chy06g01912 Chy-Chr6:23020931 Chy11g01159 Chy-Chr11:17614016 1.79E-58 dispersed
Chy06g01911 Chy-Chr6:22988370 Chy06g01912 Chy-Chr6:23020931 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01912 K13066 - csv:101214675 715.687