Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01915 TCTCATTTATATTCTGTTTTCTTTTGTTGTTCAATTTTCTCCGCTGACCTGACGAATGAATCTGCAGCTGGTGGTCTTCTAAATGCTACTTTTGGAAATGCAACAGAACTGATTATATCTATTTTTGCACTGAGAAGTCAAATGATACGTGTTGTTCAGCTGTCATTGCTAGGCTCAATTCTGTCGAACATGTTGCTGGTGCTTGGTTGTGCATTTTTCTGTGGTGGGATTGTTTTCAATAAAAAGGAACAGACGTTTAACAAGGCAACTGCTGTTGTCAACTCAGGATTGTTGTTAATGGCTGTCATGGGCCTGCTCTTTCCCGCTCTTCTCCACTACACCCACAGTGAAGCCCATTTTGGGAAGTCGGAATTGGCACTCTCGAGATTCAGCAGTTGCATTATGCTTCTGGCTTATGTTGCTTATCTTTTCTTCCAATTAAGGAGTCAAATGAATCTTTATTCTTCTGTTTATGAGGAAGAAACTCACAGTGAAGAAAGCTCAGATGAAGATGAAGCTCCTGAGATTTCCAAGTGGGAATCAGTTATCTGGCTATCAATTTTGACTGTCTGGACCTCTGTTCTATCAAAATATTTAGTCGATGCAATCGAAATTGCATCTGAATCATTGAAAATCCCAGTGTCCTTTATTAGTGTTATACTGCTTCCGATTGTGGGGAATGCTGCTGAGCATGCAAGCGCTATTATGTTTGCTATGAAAGATAAGCTAGATATTTCTCTTGGTGTAGCTATCGGATCATCAACTCAGATATCTATGTTTGGGATTCCTTTCTGTGTGGTAACTGGGTGGATTATGGGACAACCAATGGACTTGAACTTTCAACTCTTTGAGACGGCAACACTTTTTATAACTGTAATAGTCGTAGCTTTCTTGCTCCAGGAAGGAACTTCAAATTACTTCAAGGGACTGATGCTTATCCTTTGTTATCTGATAGTTGCAGCTAGCTTTTTCGTGCACGTCGATCCTCCTTTATCCGAGAATAAACTGGAGAGTTTGAAAGCGGAGTGA 1029 40.33 SHLYSVFFCCSIFSADLTNESAAGGLLNATFGNATELIISIFALRSQMIRVVQLSLLGSILSNMLLVLGCAFFCGGIVFNKKEQTFNKATAVVNSGLLLMAVMGLLFPALLHYTHSEAHFGKSELALSRFSSCIMLLAYVAYLFFQLRSQMNLYSSVYEEETHSEESSDEDEAPEISKWESVIWLSILTVWTSVLSKYLVDAIEIASESLKIPVSFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVTGWIMGQPMDLNFQLFETATLFITVIVVAFLLQEGTSNYFKGLMLILCYLIVAASFFVHVDPPLSENKLESLKAE* 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23065465 23067357 - Chy6G124430.1 Chy06g01915 229624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01915 342 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 20 330 - -
Chy06g01915 342 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 20 330 IPR004713 GO:0006812|GO:0008324|GO:0016021
Chy06g01915 342 Gene3D - 167 325 IPR044880 -
Chy06g01915 342 Gene3D - 19 164 IPR044880 -
Chy06g01915 342 TIGRFAM caca2: calcium/proton exchanger 22 324 - -
Chy06g01915 342 TIGRFAM cax: calcium/proton exchanger 21 324 IPR004798 GO:0006816|GO:0015369
Chy06g01915 342 Pfam Sodium/calcium exchanger protein 182 321 IPR004837 GO:0016021|GO:0055085
Chy06g01915 342 Pfam Sodium/calcium exchanger protein 19 147 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01915 Chy-Chr6:23065465 Chy11g00737 Chy-Chr11:10002068 4.02E-156 dispersed
Chy06g01915 Chy-Chr6:23065465 Chy04g02251 Chy-Chr4:27196737 1.11E-83 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01915 K07300 - csv:101205761 567.385