Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01918 ATGAACCTATCCCCCCAAGGTGGATGGGAACTTGTCAAAGTGATGCCGACCCCAAGTTTCGTTGTAATAGGTCAAGAGATTCATATCCTACATCAGTTTTTTTTCTTATACTTCTATTATGGTAGTAAATTCAAAATGGCTTACCTTAAATGCAGAAAATTGATTGGAGCAAGATTCTTCAACATAGGCTATGGTGAACTTACTGATACCTTCAATTCTTCAAGAGACAACGTAGGGCATGGAACCCACACTTTATCCATAGCTGGTGGCAATTTTGTCCCTGGTGCTAATGTTTTGGGCATGGGCAATGGTACTGTCAAAGGTGGCTCACCTAGAGCCCGTGTTGCGTCCTATAAGGTTTGTTGGCCAAACGAAACCGACGAGTGTGTGGACCCAAATACCTTAGCTGCCTTTGAAGCTGCAATTGAAGATGGCGTTGATGTTATCTCGATTTCTGTCGGTGGAGAGCCCAAAGAGTTCTTTAGTGATGCACTCTCTGTAGGGGCATTCCATGCAGTTGAGCGAGGTATTGTTGTTGTTTCCTCCGCTGGGAACGTGGGACCAACTCCTGGGACTGTATCAAATGTGTCCCCATGGATTCTAACTGTTGGAGCTAGTACTATTGATAGAGGTTTCACCAATTTTGTGGTCCTGGGGAATAAGAAGAAATTCAAGGGAACAAGCTTTTCTTCTAAGGTGATGCCAGTTAACAAGTTCTACCCTTTAATCAATGCTGTGGATGCAAAAGCCAACGATGTCTCCGTTAGTGATGCAGAAGTTTGCGACGAGGGCTCACTTGATCCCGAAAAGTTAGCTGGGAAGATTGTGGTTTGCCTTCGAGGAGGTCTTCCGAGAGTATCCAAGGGCTGTGTAGCTGCGAAGGCAGGGGCTGTTGGAATGCTCGTGGTAAACGATGAGGAAAGTGGGAATGCAATTTTAACTGATTCACATGTCCTTCCAGCTTCTCATGTAACCTACGATGACAGCATATCCATCTTCCAATACATCAATTCTACCAAGACACCAATGGCTTACATCAGTTCTGTGATGACAGAACTGGAAATCACACCATCCCCAGTAGTGGCTGATTTTTCATCAAGAGGCCCCAATACAATAGAGGAGTCAATCCTTAAGCCTGATATAATAGCACCAGGTGTGAATATACTGGCGGCTTACCCCGACGGCATACCATTGACAGAAGCACCATTGGACGATCGTCAATCTCCTTTTAAAGTAGATTCTGGCACATCCATGGCCTGCCCCCATATTGCTGGCATTGTAGGCCTTCTCAAAACCCTAAACCCCAAATGGAGTCCAGCAGCTATTAAATCTGCAATCATGACAACAGCCAAAACAACAGACAACAATTTCAATCCAATTGTAGACTACGGAGGACTCGAAGCAAACCCATTAGCATATGGTGCCGGACATGTTAATCCAAACAGTGCAATGGACCCTGGGCTAGTTTACGACATTACAATCGACGATTACCTCAATTTCTTATGTGCTAGAGGCTACAATACAACACAAATAAAAAGAATATCAAAGAAGAACTTTGTTTGTGATAAGTCATTCAAAGTGACGGATTTGAATTACCCATCAATCTCAGTTACAAATCTGAAAATGGGTCCTGTGGCGATCAATCGAAAATTGAAGAATGTGGGAAGTCCAGGGACATATGTTGCTAGAGTGAAGACGCCATTGGAAGTTTCAATCATTGTTGAGCCAAGAATATTGGATTTTACTGCTATGGATGAAGAGAAAAGCTTCAAGGTGTTGTTGAATAGAAGTGGAAAGGGAAAGCAAGAAGGTTATGTGTTTGGGGAATTAGTATGGACTGATGTCAATCGCCATGTTAGGACCCCAATTGTTGTGAATTTAGGAGAATAA 1890 43.33 MNLSPQGGWELVKVMPTPSFVVIGQEIHILHQFFFLYFYYGSKFKMAYLKCRKLIGARFFNIGYGELTDTFNSSRDNVGHGTHTLSIAGGNFVPGANVLGMGNGTVKGGSPRARVASYKVCWPNETDECVDPNTLAAFEAAIEDGVDVISISVGGEPKEFFSDALSVGAFHAVERGIVVVSSAGNVGPTPGTVSNVSPWILTVGASTIDRGFTNFVVLGNKKKFKGTSFSSKVMPVNKFYPLINAVDAKANDVSVSDAEVCDEGSLDPEKLAGKIVVCLRGGLPRVSKGCVAAKAGAVGMLVVNDEESGNAILTDSHVLPASHVTYDDSISIFQYINSTKTPMAYISSVMTELEITPSPVVADFSSRGPNTIEESILKPDIIAPGVNILAAYPDGIPLTEAPLDDRQSPFKVDSGTSMACPHIAGIVGLLKTLNPKWSPAAIKSAIMTTAKTTDNNFNPIVDYGGLEANPLAYGAGHVNPNSAMDPGLVYDITIDDYLNFLCARGYNTTQIKRISKKNFVCDKSFKVTDLNYPSISVTNLKMGPVAINRKLKNVGSPGTYVARVKTPLEVSIIVEPRILDFTAMDEEKSFKVLLNRSGKGKQEGYVFGELVWTDVNRHVRTPIVVNLGE* 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23107745 23110168 + Chy6G124460.1 Chy06g01918 229627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01918 629 PRINTS Subtilisin serine protease family (S8) signature 76 89 IPR015500 -
Chy06g01918 629 PRINTS Subtilisin serine protease family (S8) signature 414 430 IPR015500 -
Chy06g01918 629 SUPERFAMILY PA domain 249 337 IPR046450 -
Chy06g01918 629 Pfam Fibronectin type-III domain 529 625 IPR041469 -
Chy06g01918 629 Gene3D - 209 353 - -
Chy06g01918 629 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 48 629 IPR045051 -
Chy06g01918 629 Pfam PA domain 260 328 IPR003137 -
Chy06g01918 629 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 48 629 - -
Chy06g01918 629 ProSiteProfiles Serine proteases, subtilase domain profile. 1 484 - -
Chy06g01918 629 CDD PA_subtilisin_like 216 346 - -
Chy06g01918 629 ProSitePatterns Serine proteases, subtilase family, serine active site. 415 425 IPR023828 -
Chy06g01918 629 Gene3D Peptidase S8/S53 domain 51 497 IPR036852 GO:0004252|GO:0006508
Chy06g01918 629 SUPERFAMILY Subtilisin-like 52 488 IPR036852 GO:0004252|GO:0006508
Chy06g01918 629 Pfam Subtilase family 68 457 IPR000209 GO:0006508|GO:0008236
Chy06g01918 629 Gene3D - 501 627 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01918 Chy-Chr6:23107745 Chy06g01925 Chy-Chr6:23171906 0 dispersed
Chy06g01924 Chy-Chr6:23168004 Chy06g01918 Chy-Chr6:23107745 4.37E-93 dispersed
Chy06g01918 Chy-Chr6:23107745 Chy06g01923 Chy-Chr6:23142590 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01918 - - cmo:103491006 1095.11