Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01925 ATGGATCCAATCAGGTCGCAACCGAGACAGACGAAGACGAATTGCAAGACACCCACCTCGAAATCGGCAATGGTGGAGACGGAATTCGACGATCTGAAGAAGAATGCGAATATGCTAATGTCACCGACGGCGTTGTCGAGGATGACGAAGTCGCCGAGCATTAAATCGAATTGTCTCTGCTCTCCGACCACTCACATTGGATCTTTCCGATGCCGACGACACCGGAGCACAGCCATATCCCGCGGTGGGTCAGTTGGGTCAAACCTGTCAGATCTGGTGTTGCAACGCTATACCACTTCGTGTAGGAAGCAAAGTGCCACCATGCACATCACATTTGTGTCCTACATTGTTTATTTGGGAGCACCCTCGTTCGGATCAGACCCTACAAACTATGACGTCGAAGTCGCAACCGAGTCACAATATGATTTATTAGGATCAGTTGTGGGAAGCAAATTGGCAGCCAAGGATGCAATTAAGTATTCTTACAATAAATACATTAATGGTTTTGCTGCTACTCTTGATGAGAAACAAGCCAAGGATCTTGCAAAGAATCCAAAGGTGGTGTCAGTTTTTGAAAACAAGGAAAGAAAATTGCATACAACACGATCGTGGCATTTTCTTGGAGTGGAAAGTGATGAAGGAATTCCTTCAAATTCCATTTGGAATGCTGGAAGGTTTGGTGAAGATACAATTATAGGCAACCTTGACACAGGTGTTTGGCCAGAGTCGAAGAGCTTCAACGATGCAGGCTATGGTCCTGTTCCTTCAAGGTGGAGGGGAGCTTGTGAAGGTGGAGCCAACTTTCGTTGCAATAGGAAGTTGATTGGAGCAAGATATTTCAACGAAGGATTTGCAATGGCAAATGGTCCTCTCAACATTAGCTTCAACACAGCAAGAGATAAACAAGGCCATGGTTCACACACTTTATCCACAGCCGGAGGCAACTTTGTCCCCGGAGCCAATGTCTTTGGCTATGGCAATGGCACTGCAAAAGGAGGTTCCCCTAAAGCTCGTGTTGCTGCCTACAAGGTTTGCTGGCCTGCGACTTCTGGTGGTGGCTGTTACGATGCTGATATCTTAGCCGGTTTTGAAGCCGCCATTAGTGATGGTGTCGATGTTCTCTCGGTCTCTCTTGGTTCTGAACCTCAAGAGTTTGCTTATGATTCCATGTCCATAGGAGCATTCCATGCTGTTCAACAAGGAATCGTCGTGGTTTGCTCTGCTGGAAATGATGGTCCGCGTCCTGCGACTGTATCCAATATATCTCCTTGGATGTTCACTGTCGCAGCTAGCTCCATCGATCGAGAGTTCACAAGTTATGCTTCCCTTGGAAACAAGAAGCATTATAAGGGTTCAAGTATTTCATCGAGTGCAATGGCTGGTGGTAAATTCTACCCTTTGATAAATGCTGTAGATACAAAAGCTGCTAATGCGTCCGAAAGCCTTGCGCAACTTTGCCGGAAGGGATCGCTTGATCCAACAAAGGCAAAAGGGAAGATTATAGTTTGTCTTCGAGGAGAAAATGCAAGAGTTGAGAAAGGTTTTGCTGTTCTTCAAGCTGGTGGCGTTGGTATGATTTTAGTGAATGGCAAGAACGGTGGATCAGGCACTATGGCTGATGCCCATATACTTCCTGCCACTCATCTTAGCTACACCGATGGACTTGCTGTTGCTCAATATATTAACTCCATCAAAACACCCGTTGCTCACATAACACGTGTACAGACTCAGCTAGGAATTAAACCGTCACCTGTCATGGCTGACTTCTCATCAAGAGGCCCTAATTCCATCACTGAGGCCTTGCTCAAGCCTGATATAACAGGACCGGGAATGAGTATACTTGCATCGGTCACAACAGATGTAACTGCAACGGAATTTCCATTCGATACGCGTCGGGTGCCTTTCAACGTTGAATCGGGCACTTCCATGTCTTGCCCACACATCTCAGGTGTTGTTGGTCTTCTCAAGACTCTTTATCCCACATGGAGTCCAGCAGCTATCAAATCTGCCATCATGACTACAGCCAAAACAAGAGACAATGCGATGCATACAATATCAGACAACGTCAAGGCCAAGGCAACCCCATTTGATTATGGTGCAGGACATGTCCATCCCAATAGTGCAATGGACCCGGGCCTCGTTTACGACACAACCATCGACGATTACTTGAACTTCTTATGTGCACGTGGCTACAACTCCCTCACTCTCAAGAATTTCTATAACAAACCATTTGTCTGCTCAAAATCGTTCACATTGACCGATCTCAACTACCCATCAATCTCGATCCCAAAGTTGCAATCTGGTGCCCCAGTAACGGTCAATAGAAGAGTTAAGAATGTGGGAACCCCAGGAACATACGTAGCACGTGTGAAGGCGTCCTCAAATATCTCAGTTACGGTCGAGCCGAGTACGTTGCAGTTTAATAGTGTGGGTGAAGAGAAGGCTTTCAAGGTTGTATTTGAATACAAAGGAAATGAACAAGGTAAAGGCTATGTGTTTGGGACATTGATATGGTCAGATGGGAAGCATAATGTTAGAAGTCCTATTGTAGTAAATTTGGGATGA 2565 45.89 MDPIRSQPRQTKTNCKTPTSKSAMVETEFDDLKKNANMLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAISRGGSVGSNLSDLVLQRYTTSCRKQSATMHITFVSYIVYLGAPSFGSDPTNYDVEVATESQYDLLGSVVGSKLAAKDAIKYSYNKYINGFAATLDEKQAKDLAKNPKVVSVFENKERKLHTTRSWHFLGVESDEGIPSNSIWNAGRFGEDTIIGNLDTGVWPESKSFNDAGYGPVPSRWRGACEGGANFRCNRKLIGARYFNEGFAMANGPLNISFNTARDKQGHGSHTLSTAGGNFVPGANVFGYGNGTAKGGSPKARVAAYKVCWPATSGGGCYDADILAGFEAAISDGVDVLSVSLGSEPQEFAYDSMSIGAFHAVQQGIVVVCSAGNDGPRPATVSNISPWMFTVAASSIDREFTSYASLGNKKHYKGSSISSSAMAGGKFYPLINAVDTKAANASESLAQLCRKGSLDPTKAKGKIIVCLRGENARVEKGFAVLQAGGVGMILVNGKNGGSGTMADAHILPATHLSYTDGLAVAQYINSIKTPVAHITRVQTQLGIKPSPVMADFSSRGPNSITEALLKPDITGPGMSILASVTTDVTATEFPFDTRRVPFNVESGTSMSCPHISGVVGLLKTLYPTWSPAAIKSAIMTTAKTRDNAMHTISDNVKAKATPFDYGAGHVHPNSAMDPGLVYDTTIDDYLNFLCARGYNSLTLKNFYNKPFVCSKSFTLTDLNYPSISIPKLQSGAPVTVNRRVKNVGTPGTYVARVKASSNISVTVEPSTLQFNSVGEEKAFKVVFEYKGNEQGKGYVFGTLIWSDGKHNVRSPIVVNLG* 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23171906 23183215 - Chy6G124530.1 Chy06g01925 229634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01925 854 Gene3D Peptidase S8/S53 domain 229 722 IPR036852 GO:0004252|GO:0006508
Chy06g01925 854 MobiDBLite consensus disorder prediction 1 20 - -
Chy06g01925 854 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 113 854 IPR045051 -
Chy06g01925 854 Pfam Subtilase family 227 699 IPR000209 GO:0006508|GO:0008236
Chy06g01925 854 Gene3D - 726 853 - -
Chy06g01925 854 ProSiteProfiles Serine proteases, subtilase domain profile. 203 709 - -
Chy06g01925 854 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 98 199 IPR037045 -
Chy06g01925 854 CDD Peptidases_S8_3 197 675 IPR034197 -
Chy06g01925 854 Pfam Peptidase inhibitor I9 114 199 IPR010259 -
Chy06g01925 854 CDD PA_subtilisin_like 440 571 - -
Chy06g01925 854 Pfam PA domain 483 556 IPR003137 -
Chy06g01925 854 Pfam Fibronectin type-III domain 754 851 IPR041469 -
Chy06g01925 854 PRINTS Subtilisin serine protease family (S8) signature 300 313 IPR015500 -
Chy06g01925 854 PRINTS Subtilisin serine protease family (S8) signature 227 246 IPR015500 -
Chy06g01925 854 PRINTS Subtilisin serine protease family (S8) signature 639 655 IPR015500 -
Chy06g01925 854 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 113 854 - -
Chy06g01925 854 SUPERFAMILY Subtilisin-like 198 713 IPR036852 GO:0004252|GO:0006508
Chy06g01925 854 SUPERFAMILY Protease propeptides/inhibitors 141 196 - -
Chy06g01925 854 Gene3D - 434 578 - -
Chy06g01925 854 ProSitePatterns Serine proteases, subtilase family, serine active site. 640 650 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01121 Chy-Chr1:12834987 Chy06g01925 Chy-Chr6:23171906 1.19E-21 dispersed
Chy04g00401 Chy-Chr4:3564610 Chy06g01925 Chy-Chr6:23171906 0 dispersed
Chy05g01365 Chy-Chr5:17767530 Chy06g01925 Chy-Chr6:23171906 6.60E-07 dispersed
Chy06g01917 Chy-Chr6:23103141 Chy06g01925 Chy-Chr6:23171906 3.96E-20 dispersed
Chy06g01918 Chy-Chr6:23107745 Chy06g01925 Chy-Chr6:23171906 0 dispersed
Chy06g01923 Chy-Chr6:23142590 Chy06g01925 Chy-Chr6:23171906 0 dispersed
Chy06g01925 Chy-Chr6:23171906 Chy12g00647 Chy-Chr12:9263042 0 dispersed
Chy06g01924 Chy-Chr6:23168004 Chy06g01925 Chy-Chr6:23171906 1.95E-124 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01925 - - csv:101212014 1433.7