Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01963 ATGGGTTCTTGTCATTCGTCTCCTAAAAGGCGGCAGAGCAGAGGTGGGGTTTATTCTGCCGCCGCAGCGCCGGGAGAGGCTCCGACTGTTTCTACAACAGAGTCATTTTCTTTTTCTTCTTCTTCTTCATTTTTGTACTCGACGAAGCCGCGTTGGTGGAAAAAGAATTCGACTAAAACTTTTGGCGTTGCGGTTTGTTCAGAGAAGGTCCATGAAGTCGAGGTTCCGGGGAGGATTTGTTCAAATGGGTCATCGAGAATTGCTTGTTTGTATACGCAGCAGGGGAAGAAAGGGGTTAATCAAGACGCTATGATTGTGCAGGAGATGTTTGAGGGCAGATATGGAGGTTCTACTGATTTTTGGATAATGTTAGGTAGTTTGGCAAGGGAATATTCTTTAGATCCTCGGCTACTTACTGCAAATCCTACATGCCTTCTTGGAGCAGTATTGCTTGAGGAACTCAGCAAGCAGTCTCCGGGGTCATTTGGGTTTATGAAGGGTTCCAGAAAAGGTTGTATGTCGAATTTCAGTTCAAAAAGAGATACAGTATTTTGTGGTGTATTTGATGGACATGGTCCTTTTGGACACATGGTTGCGAAAAAAGTTCGTGATACCCTCCCTCTAATCCTATGTACACAATGGACATCTAAATCAAATGAAGACCAAAGCAAAACGAGACATTCCCGAAGTTCAAATTCTGAAGATTCTGTTGCTCTAGAAGGAGATGAAGATTCTTACAAGTCATTGGAGGGCGAAGAAAATGAAAAATTCCCCAAGATGTTTCTACCACTCAAAGTATCTCTACTGAAGTCCTTCAAATTGATGGATAAAGAGTTGAAACTGCATCAAAAAATTGATTGTTTTTGCAGTGGATCGACGGCTGTGACTCTAATAAAGCAGGGTCAGAACCTCATACTTGGAAATGTTGGTGACTCGAGAGCAGTGCTGGCTACGATAGATGAAGATAACTCTTTGATTCCAATTCAATTAACGGTGGACTTGAAACCTGACCTTCCTGGTGAAGCTGCTAGGATCCAGCAATGCAAAGGAAGGGTCTTTGCTTTGCAGGATGAGCCCGAGGTTGCACGAGTCTGGTTGCCAAATAATGATTCACCTGGTTTGGCGATGGCAAGAGCTTTTGGAGATTTTTGTCTGAAGGATTTCGGTCTTATTTCTGTTCCCGATGTTTATTATCGTCACCTTACCGCAAGAGATCAGTTCGTAATTCTGGCCACTGACGGGGTAAGTTTGTCCCCAGGATATCAAAATCCTCGGCATCGTGCTAGTATATGGTTCATTAGAGTATTTCTTCTGGTTTGGGATGTTCTTTCAAATAAAGAAGCTATCGAGATTGTTGCGTCAGCCCCTTCTCGTGAAACAGCAGCCAGAGCTCTTGTCGACTGTGCTGTTCGTTCATGGAGACTGAAATATCCCACATCCAAGAATGATGATTGTGCTGTTGTATGCCTCTTTCTCGAGTATGAGCCTGAAGTAGATGAAAACACGGAAACTTGTGCAATGCCAGTGGAAGAGGTTCTGGCCACACCAAGCAACGACGCAAAAGACATCAAAGTTGACTTAGATGATCGTAGAACAACTGTTGTCGAGCAGTCAGGCACTGTACAAAGCTGTAATGAGATTGTACCTATCTCCGACTCAACGGATGAGAAGGTTGTAGCTGGAGGGCGAAACCGGTCAAAGAGAAGCTTAGCTGAGTGCATTTCAAATGAAGAGGAGGAATGGTCTGCATTGGAGGGTATTACCAGAGTGAATAGTTTGCTAAGCCTTCCAAGGTTCCTTTCTGGTGACAAAAGATCAGGCAGTTGGAGGAAGTGGCTATGA 1842 44.08 MGSCHSSPKRRQSRGGVYSAAAAPGEAPTVSTTESFSFSSSSSFLYSTKPRWWKKNSTKTFGVAVCSEKVHEVEVPGRICSNGSSRIACLYTQQGKKGVNQDAMIVQEMFEGRYGGSTDFWIMLGSLAREYSLDPRLLTANPTCLLGAVLLEELSKQSPGSFGFMKGSRKGCMSNFSSKRDTVFCGVFDGHGPFGHMVAKKVRDTLPLILCTQWTSKSNEDQSKTRHSRSSNSEDSVALEGDEDSYKSLEGEENEKFPKMFLPLKVSLLKSFKLMDKELKLHQKIDCFCSGSTAVTLIKQGQNLILGNVGDSRAVLATIDEDNSLIPIQLTVDLKPDLPGEAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVYYRHLTARDQFVILATDGVSLSPGYQNPRHRASIWFIRVFLLVWDVLSNKEAIEIVASAPSRETAARALVDCAVRSWRLKYPTSKNDDCAVVCLFLEYEPEVDENTETCAMPVEEVLATPSNDAKDIKVDLDDRRTTVVEQSGTVQSCNEIVPISDSTDEKVVAGGRNRSKRSLAECISNEEEEWSALEGITRVNSLLSLPRFLSGDKRSGSWRKWL* 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23624897 23633383 + Chy6G124910.1 Chy06g01963 229672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01963 613 PANTHER ALPHABET, ISOFORM E-RELATED 439 597 - -
Chy06g01963 613 PANTHER ALPHABET, ISOFORM E-RELATED 174 415 - -
Chy06g01963 613 MobiDBLite consensus disorder prediction 1 35 - -
Chy06g01963 613 SMART PP2C_4 76 490 IPR001932 -
Chy06g01963 613 SUPERFAMILY PP2C-like 439 493 IPR036457 -
Chy06g01963 613 MobiDBLite consensus disorder prediction 220 250 - -
Chy06g01963 613 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 174 415 - -
Chy06g01963 613 SUPERFAMILY PP2C-like 81 416 IPR036457 -
Chy06g01963 613 Pfam Protein phosphatase 2C 174 415 IPR001932 -
Chy06g01963 613 PANTHER ALPHABET, ISOFORM E-RELATED 1 111 - -
Chy06g01963 613 ProSiteProfiles PPM-type phosphatase domain profile. 87 492 IPR001932 -
Chy06g01963 613 CDD PP2Cc 165 492 IPR001932 -
Chy06g01963 613 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 439 597 - -
Chy06g01963 613 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 1 111 - -
Chy06g01963 613 Gene3D - 168 500 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00688 Chy-Chr5:8866348 Chy06g01963 Chy-Chr6:23624897 1.74E-142 dispersed
Chy06g01963 Chy-Chr6:23624897 Chy08g00602 Chy-Chr8:13832767 1.81E-85 dispersed
Chy06g01963 Chy-Chr6:23624897 Chy05g01064 Chy-Chr5:15162792 8.33E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01963 - - csv:101209961 808.52