Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01964 ATGATTCATGTTTTGGATTTCGATATTATGCATGGTGTTCAATGGCCTCCTCTTATGCAAGCTTTGGCTGATCGTTTTCCTTCTCCTATGCTTCGTATTACTGCCACTGGTCTTGATCTTAATTTCCTTCATAAGACTGGTGATAGACTCTCAAAATTTGCCCAATCACTTGGTTTGAGGTTTCAGTTTCACCCTTTGCTTCTTCTTCATGATCGTGATCATCATCGCGTTATCCCTGCCGCTCTTACCCTCTTCCCTGATGAAGCTCTCGCCGTTAACTGCGTACTCTACTTGCACAGGTTAATGAAGGACGATGTTCGAGTATTGCTCAATAAAATCAAGGCTTTGAATCCAAAAGTGGTGACAATAGCTGAAAAGGAAGCAAATTTCAACCATCCATTATTCATGCAAAGATTTGTAGAGGCATTGAATCATTACACTTTATTATTTGATTCATTAGAAGCAACTTTACCTCCAAACAGTAGGGAGAGATTGGCAGTGGAGCAAGTTTGGTTTGGGAGGGAAATAAGCGACATCGTTTCAGGAGAAGTGAATAAGAAAAAACAACACTATGCTGATAGGTATGAATCATGGGAAACAATGCTTAAAAGTTTAGGATTTTCTAATATTCCTTTAAGCCCTTTTGCTCTTTCACAAGCTAAACTCCTTCTAAGACTTCATTATCCTTCTGAAGGTTATCATCTCCAAATCCTTCATGATTCCCTTTTTCTTGGTTGGCAAAATCAACCCCTCTTTTCAGTCTCTTCATGGCATTGA 777 39.25 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLRFQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRLMKDDVRVLLNKIKALNPKVVTIAEKEANFNHPLFMQRFVEALNHYTLLFDSLEATLPPNSRERLAVEQVWFGREISDIVSGEVNKKKQHYADRYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDSLFLGWQNQPLFSVSSWH* 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23644163 23645616 + Chy6G124920.1 Chy06g01964 229673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01964 258 ProSiteProfiles GRAS family profile. 1 258 IPR005202 -
Chy06g01964 258 Pfam GRAS domain family 1 257 IPR005202 -
Chy06g01964 258 PANTHER SCARECROW-LIKE PROTEIN 18 2 258 IPR030017 GO:0005634|GO:0010223
Chy06g01964 258 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 258 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01964 Chy-Chr6:23644163 Chy03g00094 Chy-Chr3:912130 7.51E-56 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18217 PF03514 GRAS 4.80E-85 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01964 - - csv:101213853 513.842