Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01966 ATGTGGCTTCTTTTGATTGGAGCTATTGTTGTTTTAAGTTTTACACACTGGGTTTATAGTTGGATAAATCCCAAATGTAATGGAAAACTTCCACCAGGTTCAATGGGTTTGCCCTTACTTGGTGAAACCCTGCAGTTCTTTGCTCCCAATACCTCCTCTGATATTCCTCCTTTCATTAGAAAAAGAATGGATAGGTATGGACCTATATTCAGAACAAGTTTGGTGGGAAGACCATTGATTGTCTCAACAGACCCCGACTTAAATCACTTTATCTTTCAACAAGAGGGACAATTGTTTCAGAGCTGGTATCCTGATACCTTCACAGAGATATTTGGAAGACAAAATGTCGGTTCGTTGCACGGATTCATGTATAAATACCTAAAGAATATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAAAAAGATGATTCCTGAAGTTGAGGCTGTAGCAACCAGACGATTGAAACAATGGTCATCGCATAAACCAGTTGAATTGAAGGATAAGACTGCAAGTATGATCTTTGATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCCGAGAATTTGAGAGACAACTTTGTTGCATTCATACAGGGCTTAATCTCCTTCCCTCTAAATGTTCCCGGAACTGCTTATAACAAATGCTTACAGGGCAGGAAAAAAGCAATGAGGATGCTGAAGAACATGTTACAAGAAAGGCGAACAAATCCAAGGAAACAACGAATAGATTTTTTTGATTTTGTTCTTGAAGAACTGGAGAAGGATGGAACTCTTCTTACTGAGGAAATTGCTTTGGACCTCATGTTCGTACTACTTTTTGCAAGCTTTGAAACTACATCACTTGCTATTACAGCAGCCATCAAATTTCTCCTCAACAATCCTCATGTGCTTGAGGAATTGACGGCTGAACATGAGGGAATATTGAAGAGAAGGGAAATTTCAGATTCTGGGCTTACATGGGGGGAATACAAATCCATGACATTCACATTTCAGTTTATCAATGAAACTGTGAGACTGGCAAATATAGTTCCAGGAATTTTTCGAAAAGCACTGAAAGATATCGAGTTTAAAGGATATACCATTCCATCTGGTTGGGCTGTTATGGTCTGCCCTCCCGCCGTGCACTTAAATCCAGAAAAGTACGTTGATCCCCTTGCTTTTAACCCGTGGCGATGGGAGAAATCTGAATTGAACGGAGGCTCTAAACATTTCATGGCTTTTGGTGGTGGCATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTGCAAATGGCTGTGTTTCTCCACTGCCTGGTTACAAAGTACAGGTTCAAAGCAATCAAAGGGGGCAACATCGTTCGAACTCCCGGCTTACAGTTTCCCGACGGCTTCCATGTTCAGATAACGGAGAAATGA 1410 40.57 MWLLLIGAIVVLSFTHWVYSWINPKCNGKLPPGSMGLPLLGETLQFFAPNTSSDIPPFIRKRMDRYGPIFRTSLVGRPLIVSTDPDLNHFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLKKMIPEVEAVATRRLKQWSSHKPVELKDKTASMIFDLTAKKLISYDSENSSENLRDNFVAFIQGLISFPLNVPGTAYNKCLQGRKKAMRMLKNMLQERRTNPRKQRIDFFDFVLEELEKDGTLLTEEIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTAEHEGILKRREISDSGLTWGEYKSMTFTFQFINETVRLANIVPGIFRKALKDIEFKGYTIPSGWAVMVCPPAVHLNPEKYVDPLAFNPWRWEKSELNGGSKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIVRTPGLQFPDGFHVQITEK* 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23691853 23695047 + Chy6G124940.1 Chy06g01966 229675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01966 469 PANTHER CYTOCHROME P450 26 8 466 - -
Chy06g01966 469 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 SUPERFAMILY Cytochrome P450 27 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 Pfam Cytochrome P450 31 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01966 469 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 8 466 - -
Chy06g01966 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Chy06g01966 469 Gene3D Cytochrome P450 23 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01358 Chy-Chr4:20218963 Chy06g01966 Chy-Chr6:23691853 6.77E-178 dispersed
Chy06g01966 Chy-Chr6:23691853 Chy12g01337 Chy-Chr12:17691559 3.37E-144 dispersed
Chy06g01966 Chy-Chr6:23691853 Chy01g02211 Chy-Chr1:26589152 3.60E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01966 - - csv:101209473 942.184