Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01989 ATGAGAAAGGTTAATCAGCTTTGTCTTTCTCATGCTCTTCTGTTCTTCATTCTATTTCTCTTTGGATTTTGCTCTGCTGTCACTGAGAAGGACATTTTGCTTCAATTCAAAGATGCTGTTACAGAGGACCCGTTTAATTTCTTGAGAACTTGGGTTGCCGGCGAGGATCATTGCCGTAGTTTCAACGGCGTGTTCTGTAACTCCGATGGGTTTGTGGAAAGGATTGTTTTATGGAACTCTAGCTTAGCTGGAACTTTGTCGCCTTCCTTGTCGGGATTGAAGTTCTTGAGGACTTTGACATTGTATGGAAATAGATTTACTGGTAATATTCCGATCGAATATGGCGCCATTGTTACACTATGGAAGTTGAACTTGAGCTCCAATGCGTTTTCGGGTTTGGTGCCAGAGTTCATCGGCGATTTGCCGAGCATTCGGTTTCTGGATTTGTCTAGAAATGGCTTTACTGGGGAGATTCCTTCAGCTGTGTTCAAGAATTGTTTTAAAACTAGGTTTGTTTCGTTTTCTCATAATAGATTTTCAGGTAGGATACCTTCAACAATTTTGAATTGTTTGAGCCTTGAAGGCTTTGATTTCTCTAATAATGATCTAAGTGGGAGCATTCCTTTGCAACTCTGTGACATTCAAAGATTAGAGTATGTTTCTGTAAGAAGCAATGCATTATCTGGGAGTGTCCAAGGGCAGTTCTCTTCTTGCCAGAGTTTGAAACTTGTGGATCTGAGTAGCAATATGTTCACTGGGTCACCGCCGTTTGAGGTTCTCGGATTCAAAAACATCACTTATTTTAATGTCTCGTATAACAGGTTTAGTGGGGGAATTGCAGAGGTGGTTTTGAATTTGCACAACCTAAATCTTGTTGGTGAGATTCCTAATGACATAACCAGTTGCAGGTTTCTTCTTGAGTTGGATGTTTCTGGTAATGCATTGGAAGGGGAGATTCCTCAAACTCTTTACAACATGACATACCTCGAAATCCTTGATCTACACGATAACCATCTGAACGGAAGCATTCCATCTACGCTTGGGAGCCTCTTGAAACTGCAGTTTCTGGATCTATCTCAAAACCTGCTGTCTGGTTCAATACCTCGTACTCTTGAAAATCTCACATTGCTGCACCATTTCAATGTTTCTTTCAATAACCTTTCAGGCGCCATACCTTCTGTAAATACGATCCAAAATTTCGGGCCTTCTGCATTCTCAAACAATCCTTTTCTTTGTGGTGCTCCCTTGGATCCTTGCTCTGCAGGTAACACCCCTGGCACGATTTCCATATCGAAGAAACCAAAGGTTCTTAGTCTATCTGCAATCATTGCAATCATAGCAGCAGTTGTGATCCTGGTCGGGGTATGCGTGATCTCCATTTTGAATCTAATGGCTCGGACGAGGAAGGAAAGGAGCACCGAAATCATTGAGAGTACACCGCTTGGTTCAACCGATTCAGGCGTCATAATCGGGAAACTGGTTCTTTTCAGCAAAACTTTGCCTTCCAAGTATGAAGACTGGGAGGCTGGCACCAAAGCTTTGCTCGACAAGGAATGCATAATAGGGGGTGGCTCAATCGGCACCGTCTACAGAACAAGTTTTGAGGGCGGCATCTCCATTGCTGTGAAGAAGCTGGAGACTCTAGGGAGGATCAGAAGTCAAGATGAGTTTGAGACTGAAATCGGACGTTTGGGAAACATCAAACACCCAAACTTAGTCGCTTTCCAGGGCTACTATTGGTCGTCATCAATGCAGTTGATTCTCTCTGAATTCGTCACGAATGGCAATTTGTATGACAATCTACATAGTCTGAATTATCCAGGCACCAGCACAGGCATTGGCAATGCGGAGTTACATTGGTCTAGAAGATACAAAATTGCACTTGGAACAGCTAGAGCTCTTGCTTATCTTCACCATGATTGTAGACCTCCAATTCTTCACCTCAACATAAAATCAACTAACATACTGTTAGATGAAAACTACGAAGCCAAGTTATCCGATTACGGGTTGGGGAAGTTGCTTCCAGTTTTGGACAATTACATTTTAACAAAGTACCATAGTGCCGTAGGGTACGTTGCACCAGAGTTAGCACAAAGTTTGAGAGCTAGTGAAAAGTGCGATGTGTATAGTTTCGGAGTGATTCTACTGGAGTTGGTAACAGGGAGGAAGCCAGTTGAGAGTCCAAGAGCAAATCAGGTAGTGATTTTGTGTGAATATGTAAGGGAGTTGTTGGAAAGTGGTTCTGCTTCTGACTGTTTCGATCGTAACTTGCGTGGCATTGCCGAAAACGAGCTCATCCAAGTGATGAAGTTGGGATTGATTTGTACATCTGAGATCCCTTCAAAGAGACCGAGCATGGCAGAGGTTGTTCAAGTTCTTGAGTCGATACGAAACGGATTAGGATCATAG 2409 42.84 MRKVNQLCLSHALLFFILFLFGFCSAVTEKDILLQFKDAVTEDPFNFLRTWVAGEDHCRSFNGVFCNSDGFVERIVLWNSSLAGTLSPSLSGLKFLRTLTLYGNRFTGNIPIEYGAIVTLWKLNLSSNAFSGLVPEFIGDLPSIRFLDLSRNGFTGEIPSAVFKNCFKTRFVSFSHNRFSGRIPSTILNCLSLEGFDFSNNDLSGSIPLQLCDIQRLEYVSVRSNALSGSVQGQFSSCQSLKLVDLSSNMFTGSPPFEVLGFKNITYFNVSYNRFSGGIAEVVLNLHNLNLVGEIPNDITSCRFLLELDVSGNALEGEIPQTLYNMTYLEILDLHDNHLNGSIPSTLGSLLKLQFLDLSQNLLSGSIPRTLENLTLLHHFNVSFNNLSGAIPSVNTIQNFGPSAFSNNPFLCGAPLDPCSAGNTPGTISISKKPKVLSLSAIIAIIAAVVILVGVCVISILNLMARTRKERSTEIIESTPLGSTDSGVIIGKLVLFSKTLPSKYEDWEAGTKALLDKECIIGGGSIGTVYRTSFEGGISIAVKKLETLGRIRSQDEFETEIGRLGNIKHPNLVAFQGYYWSSSMQLILSEFVTNGNLYDNLHSLNYPGTSTGIGNAELHWSRRYKIALGTARALAYLHHDCRPPILHLNIKSTNILLDENYEAKLSDYGLGKLLPVLDNYILTKYHSAVGYVAPELAQSLRASEKCDVYSFGVILLELVTGRKPVESPRANQVVILCEYVRELLESGSASDCFDRNLRGIAENELIQVMKLGLICTSEIPSKRPSMAEVVQVLESIRNGLGS* 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23866716 23869475 - Chy6G125170.1 Chy06g01989 229698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01989 802 Gene3D Transferase(Phosphotransferase) domain 1 592 800 - -
Chy06g01989 802 Pfam Leucine Rich Repeat 352 374 IPR001611 GO:0005515
Chy06g01989 802 SUPERFAMILY L domain-like 48 424 - -
Chy06g01989 802 Pfam Protein kinase domain 519 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01989 802 PANTHER UNNAMED PRODUCT 24 281 - -
Chy06g01989 802 ProSiteProfiles Protein kinase domain profile. 515 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01989 802 CDD STKc_IRAK 521 796 - -
Chy06g01989 802 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Chy06g01989 802 PANTHER - 24 281 - -
Chy06g01989 802 Gene3D Ribonuclease Inhibitor 26 176 IPR032675 -
Chy06g01989 802 PANTHER - 283 799 - -
Chy06g01989 802 SUPERFAMILY Protein kinase-like (PK-like) 516 794 IPR011009 -
Chy06g01989 802 PANTHER UNNAMED PRODUCT 283 799 - -
Chy06g01989 802 Gene3D Ribonuclease Inhibitor 177 282 IPR032675 -
Chy06g01989 802 Gene3D Ribonuclease Inhibitor 283 425 IPR032675 -
Chy06g01989 802 Gene3D Phosphorylase Kinase; domain 1 491 591 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01989 Chy-Chr6:23866716 Chy07g01444 Chy-Chr7:18902186 4.80E-43 dispersed
Chy12g00082 Chy-Chr12:827270 Chy06g01989 Chy-Chr6:23866716 1.11E-11 dispersed
Chy06g01989 Chy-Chr6:23866716 Chy12g00907 Chy-Chr12:14466675 9.24E-15 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71346 PF00069 Pkinase 4.50E-35 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01989 - - mcha:111020408 1083.17