Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02042 ATGAGAAGCCCCAGTCCTCCCACATCGGCTTCCACTCTCTCTTCTTCCTTTGGCGGCGGTGGCGGTGGCGGTTGTGTTCCTTCGCTTCCTCCTGAGACTCCTGCTGTTGAACCGGTCGCTGGAGCTGGTGTTGGTAACGTCATTTTTCCAGGTGGATTGGAGCGATGTGGGGTTGGATTAGAAGATTTGGAGAGTATGTGGTCGGAAACAGCCGGCCCAGAACCGTCGTTTCTCCGATGGTTCGCCGGAGATGTTGAAGATCCCAGTTTGGGGAGTAAAAGTGTTTTGGCTAATGGGAATATACCCTTTGATTTGGATGGCAATGCCGGTATCGGAATCGTCGATCAGGGTTCCGAATTTGACACCGGTTCTGGTAATGTTCTTGCCAACATTAATCCTAATTTATCGTTTCCTCTTGCTGCTTGTACTGGGTTTTCTGATGTTAATGGTAACAATAAGTCTTTTAATAGAAACACTTCTGGAGGGGTTGTTAATTACAAGAGTTCTAGTTTGGGTTCGAACAATCGCCATGGAAATTTCAATGTTCAGAACCCTATCTTTACTGGGTCTCTTGAAAATCTTGTTGTTCCCGTTTCTGGTATGATTTATCCTCAACAACTTCAGCCATTTGAGAGCCCCGATGAGAAACCTCAGAATTTAAATACTCAGGTTTTGTTGAACCAACATCAGCAGCCTCAGAACCCTAGCTTTTTTGTGCCATTGACGTTTGGTCAACAGGAACAGCAGCTCCAGCCTCAACTGAAGAGGCATAATTCGAGTGGAGGACTTGACCCCAACCCGAATGGGCAGATCCTGAAAGTCCCGTTTATGGATCCAGGGAATGAGATTTTTCTGAGGAATCATCAGTTGCAGGTGTTGCAACAGCAGCAGCAGCAGCAGCTTGGTTATCCTCCGGGTTTGCAGTTTCTTCCTCAGCAAAAGGCAATGTCGCCGAAGCCAAAAGTTGTAGGGCTTGGCGACGAAATGTCGTATCACAATCCCCCACAGCAACAGCATCAGCATGCTTTGCTCGACCAGCTCTACAAGGCAGCAGAGCTGGTAGGGACTGGGAATTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCTGTTGGAAAGCCCCTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCTCTTCAATTGCTCCTCCTTATGAATAACCCAGTTAATCCTCCTCCTCCTCGCTGCCCGACACCGTTTGATGTGATCTTCAAGATGGGTGCTTACAAAGTGTTTTCGGAAATTTCCCCACTCATTCAGTTTGTGAATTTCACCTGCAACCAGGCACTGCTTGAGGCACTCGATGACATTGATCGAATTCACATTGTAGATTTCGATATTGGTTTTGGAGCTCAGTGGGCTTCTTTTATGCAGGAACTGTCCTTGAGGAACCGGGGTGCACCTTCGCTCAAAATCACTGCTTTTGCCTCTCCCTCAACTCACCATCCAATTGAACTTGGGCTTATGCGCGAAAATCTCACTCAATTTGCTAATGACATTGGAATAAGTTTTGAGTTTGAAGTGGTTAACTTTGATTCTTTGAACCAGAACCCCTTTCCTTTGCCATTTCCACGGTCAAGCGAAAATGAGGCCGTTGCAGTAAACTTCCCTCTATGGTGTTCATCGAATCAACCAGCGATGCTTCCGTCTCTCCTCCGCTTCATCAAGCAACTCTCACCGAAAATTGTGGTTTCACTGGACCGAGGGTGTGATCGAAGTGACCTCCCCTTTCCTCAGCATATGCTTCAGGCACTTCAGTCCTACATTAACCTCCTGGAATCTCTGGATGCTATCAATATGAATTCAGATGCTGTGAACAAGATAGAAAGGTTTCTTTTGCAACCCAGAATTGAAAGTACAGTTCTGGGACAACTTCGAGCACCTGAAAGAATGCCCCCTTGGAAGACACTCTTTGCCTCTGCTGGGTTTACGCCTGTAACCTTTAGCAACTTCACTGAAACTCAAGCAGAATGTGTAGCAAAGAGAACTTCTGTGAGGGGATTTCACGTTGAGAAACGCCAAGCTTCCCTAGTTTTATGCTGGCAGCGTCGGGAGCTCATATCTGCTTCAGCATGGAGATGTTGA 2121 47.19 MRSPSPPTSASTLSSSFGGGGGGGCVPSLPPETPAVEPVAGAGVGNVIFPGGLERCGVGLEDLESMWSETAGPEPSFLRWFAGDVEDPSLGSKSVLANGNIPFDLDGNAGIGIVDQGSEFDTGSGNVLANINPNLSFPLAACTGFSDVNGNNKSFNRNTSGGVVNYKSSSLGSNNRHGNFNVQNPIFTGSLENLVVPVSGMIYPQQLQPFESPDEKPQNLNTQVLLNQHQQPQNPSFFVPLTFGQQEQQLQPQLKRHNSSGGLDPNPNGQILKVPFMDPGNEIFLRNHQLQVLQQQQQQQLGYPPGLQFLPQQKAMSPKPKVVGLGDEMSYHNPPQQQHQHALLDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMNNPVNPPPPRCPTPFDVIFKMGAYKVFSEISPLIQFVNFTCNQALLEALDDIDRIHIVDFDIGFGAQWASFMQELSLRNRGAPSLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFEVVNFDSLNQNPFPLPFPRSSENEAVAVNFPLWCSSNQPAMLPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIESTVLGQLRAPERMPPWKTLFASAGFTPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWRC* 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24626542 24628662 + Chy6G125700.1 Chy06g02042 229751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02042 706 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Chy06g02042 706 ProSiteProfiles GRAS family profile. 334 705 IPR005202 -
Chy06g02042 706 MobiDBLite consensus disorder prediction 1 32 - -
Chy06g02042 706 PANTHER SCARECROW-LIKE PROTEIN 6 2 705 - -
Chy06g02042 706 Pfam GRAS domain family 344 705 IPR005202 -
Chy06g02042 706 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 705 IPR005202 -
Chy06g02042 706 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g02042 Chy-Chr6:24626542 Chy11g01699 Chy-Chr11:23436229 3.86E-169 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18221 PF03514 GRAS 3.60E-95 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02042 - - csv:101218630 1311.98