Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02058 ATGAAGAGAGAAACAATGGAAGATTTTGCAATAATGAGTGGGTTGGTTGGAGTGCAGTTTGTATATGCAGGAAACTCTGTTGTTATGAGTTTTCTTATGTCTTTAGGGATTGATCCTTTAACCCTTGTTATCTTCTCTACCTTCTCTACTTTTCTCATTGTCTCTCCCATTGCTGTTTATTTCGAAAGGTATAATTGGCCAAAGAAACTTAGTCTAAAGTTGATTCTTCAGCTTGTTCTCATATCCTTTGGAGGGGTTACATTGTTTCAGTCCCTTTTACTGAAAGGAATACAGCTAACTTCGCCGACTTTAGCTACGGCGATGCCGAATCTTGCTCCTGGACTCATCTTTGCCATTGCTTGGATCTTTAGATTAGAAAAAGTTCAGCTAAGTTGCATCTATAGCAAGATCAAGATTTTAGGTACATTGCTATGTGTGATAGGCGCATTCACCATGAGCATAATTCACAGTGCTTCATCGGATGTAGCTGGAAAAAATAGTATCCCACGACAATCACCTCTGAGTGAGCAACTGTTGGATGAGCAGAAGATCCTCGGTTGCGCATATCTCTTTGTGGCGATCATTATTTTATCTTGCATAGTTGTTCTCCAGGCATCGACACTAGGCGATTTCCCGGCACCAATGTCGTTGTGTGCGATAACATCCCTCATTGGAGTGCTCTTAACCATAGGTGTACAGATAATTCAATATCACAGAATTGATATTGCTTGGCCACTTCTAATCGGTGTTAAAGAATTGGCTGCCTATGTTATTCTTGGCGGAACTATAAGTGGCGCTTGCGTGAGCTTCAACGGGTGGGCGATGAAGAAACGAGGGCCAGTTTTGGTGTCAATGTTTAGTCCGATAGGAACAGTTTGTTCACTCGTTCTCTCAGTTATCACCTTAGGAGAATCCATCAACATTGGAAGCCTTGCTGGTATGTTCATGATGTTTATCGGCCTCTACTTCGTCCTATGGGCGAAAGGGAAGGAACGTTACGTGAACCGAAACCATCTCGAGAGTGAGTTCGACGTTGACAAGCCTCTTTTAAGTTGA 1056 42.33 MKRETMEDFAIMSGLVGVQFVYAGNSVVMSFLMSLGIDPLTLVIFSTFSTFLIVSPIAVYFERYNWPKKLSLKLILQLVLISFGGVTLFQSLLLKGIQLTSPTLATAMPNLAPGLIFAIAWIFRLEKVQLSCIYSKIKILGTLLCVIGAFTMSIIHSASSDVAGKNSIPRQSPLSEQLLDEQKILGCAYLFVAIIILSCIVVLQASTLGDFPAPMSLCAITSLIGVLLTIGVQIIQYHRIDIAWPLLIGVKELAAYVILGGTISGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLVLSVITLGESINIGSLAGMFMMFIGLYFVLWAKGKERYVNRNHLESEFDVDKPLLS* 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24761629 24763869 - Chy6G125860.1 Chy06g02058 229767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02058 351 PANTHER WAT1-RELATED PROTEIN 10 351 IPR030184 GO:0016021|GO:0022857
Chy06g02058 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 330 - -
Chy06g02058 351 PANTHER OS11G0588100 PROTEIN 10 351 - -
Chy06g02058 351 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020|GO:0016021
Chy06g02058 351 Pfam EamA-like transporter family 17 153 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g02058 Chy-Chr6:24761629 Chy08g00779 Chy-Chr8:15468048 1.31E-39 dispersed
Chy06g02058 Chy-Chr6:24761629 Chy03g01417 Chy-Chr3:16911876 7.88E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02058 - - csv:101220774 659.448