Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02129 ATGGGAAGCGGAGTCTCCAGCCTCTTCTCGTGCCTCAAGCCGGAGACTCGCCCCGCCGCCCTTCCCGCCGACAATTCCGACATCCTCTTCTCCGCCTCCGACCCACTTGACGAAACCCTAGGCCATTCCTTTTGTTACGTCCGTTCTTCTAACCGTTTCCTTTCTCCTTCTCATTCCGATCGCTTTCTTTCCCCTTCTCAGTCCCTTCGTTTTTCCCCTCCTCACGACCCTTCTTCACTTCCTACTGCTACTACTCGGACTAGAACTGGCCCCCCGGAGACTGCTTTCAAAGCCATCTCTGGTGCTTCTGTCAGTGCTAATAGTTCTATTCCCAGATCTGTTCTTATGCTTGATGCTGTTTATGACGATGCCACTGACACTGCTCTTGGTGCTTCTGCTGGTGGTTGTGGTGTTAGAGGGAGTATTTTGAATGGTTTTGAGAGTACTTCTTCTTTTACTGCTCTCCCACTTCAGCCTGTTCCTAGAGGTGGGACTGAACCTTTGGAACGAGGTGGGTTTTTTCTCTCTGGTCCAATTGAGCGTGGGGCGTTGTCTGGTCCACTTGATGCTAATGTCGATGCTGCTGCTGCTGCTGCTTCTGCCGGTGGTGGTAGTGGTGGCGGGAGAGTTCATTTCTCTGCTCCACTTGGTGGGATGTACGTGAAGAAGAAGAGGAAGAAGGGCATTTCGGGGTTTAGGAAGGCGTTTACGAGGAATTTTTCGGATAAGCGTCCGTGGGTGGTGCCGGTGTTGAATTTTGTTGGTCGGAAGGAGAGTTCGACGGCGGGAGATGAGCCGGAGGTGAGGAATGAGAGTGATGTTCAATGGGCGCTTGGGAAGGCTGGAGAGGATCGGGTACATGTGGTTGTATCGGAAGAGCAAGGGTGGTTGTTCGTTGGGATTTATGATGGCTTTAATGGCCCCGATGCGCCGGAATTCTTGATGGGTAATCTTTACAGAGCTGTATTCAATGAGCTTCAGGGATTGTTTTGGGAAATTGACGATAATGAGGAGGCTGCTGCTAATTCCAACCCTCCGAATGTGGCGGGAGAGAGCACGGTCGGCATGCGTGTGAATGAAACTAATGCCGACCCATCCTCGAGAGCCTCTGGTCAAACCATTCAAACTAATGGGAATATTTCAGTAGTTGGAAATGAAGTGGAAGTGGAACAACCGGCTGCTGATCGAGGATCGGCTAAGCGGGTTACGTTTCAATCCGAGGATGTACCGGAGAACAGGCGGAGGCGGCGCTTGTGGGAGTATTTAGCGGAGGACGATACACAGGACGGACTTGATCTTTCAGGTTCAGATAGATTTGCATTTTCTGTTGATGACGCGCTTAGTGTAAATAGTGCAGGTTCAGTAGCTGGTAGAAGGTGGTTGTTATTGTCCAAGTTAAAACAAGGGTTGTCAAAGCATAAGGAGGGTCATGTTAAGACTTTGTTCCCATGGAAGTATGGTTTAGGAGATAAAGAGAAGGTTGATGAGACTGAGAATAGGGTGGAGGAGACATCATATCGAAGTGGTAAGAGGAGAAAGGAAGGCTTAATTGATCATGAGTTGGTGTTGGGGGCATTGTCACGGGCTCTTGAGATAACTGAATTAGCATATTTGGACATGACAGATAAGTTGCTTGATACGAATCCAGAGCTTGCTTTGATGGGTTCTTGCTTGCTGGTTGTGTTAATGAGGGATGAAGATGTGTATGTAATGAATTTGGGTGACAGCCGTGCCATTGTTGCACAGTATGAGCAACAAGAAGTTGGCCTTAGTGAAGACATGAAGGAGGAGGGCCACAAAAGAACGGGCATGGAGGGTATAATTGAGGAGTCTACAACGAGTGAAGGGAAAATAACTCCAACGAACCAACCTTCGGCTCAGACAACGAGATTGACTGCATTGCAGCTATCCACCGATCATAGTACGAGCATTGAAGAAGAAGTAAGAAGAATAAAGAATGAGCACCCTGATGATAAACAGTGCATTGTCAACGATAGAGTGAAGGGCCGTCTAAAGGTTACAAGGGCATTTGGTGCCGGATTTTTGAAACAGCCAAAGCTGAATGATGCATTACTGGAAATGTTTCGGAACGAGTATATTGGTACTGCACCATATTTATCATGCTTGCCATCACTTCGTCACCATAGACTCTGCCCTACGGATCAATTCATAGTGCTCTCATCTGATGGATTGTATCAATATCTAACCAATCAAGAAGTAGTTTCTTATGTTGAGAACTTTATGGAGAAGTTTCCAGATGGAGACCCTGCACAGCACTTGATAGAGGAGCTTCTTTGCCGTGCAGCTAGAAAAGCAGGAATGGATTTTCATGAATTGTTGGACATCCCACAGGGGGATCGAAGAAAGTATCATGATGATGTTACTGTTATGGTGATTTCACTTGAAGGAAGAATCTGGAAATCCTCGGGAAAATATCTTTGA 2442 47.38 MGSGVSSLFSCLKPETRPAALPADNSDILFSASDPLDETLGHSFCYVRSSNRFLSPSHSDRFLSPSQSLRFSPPHDPSSLPTATTRTRTGPPETAFKAISGASVSANSSIPRSVLMLDAVYDDATDTALGASAGGCGVRGSILNGFESTSSFTALPLQPVPRGGTEPLERGGFFLSGPIERGALSGPLDANVDAAAAAASAGGGSGGGRVHFSAPLGGMYVKKKRKKGISGFRKAFTRNFSDKRPWVVPVLNFVGRKESSTAGDEPEVRNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELQGLFWEIDDNEEAAANSNPPNVAGESTVGMRVNETNADPSSRASGQTIQTNGNISVVGNEVEVEQPAADRGSAKRVTFQSEDVPENRRRRRLWEYLAEDDTQDGLDLSGSDRFAFSVDDALSVNSAGSVAGRRWLLLSKLKQGLSKHKEGHVKTLFPWKYGLGDKEKVDETENRVEETSYRSGKRRKEGLIDHELVLGALSRALEITELAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNLGDSRAIVAQYEQQEVGLSEDMKEEGHKRTGMEGIIEESTTSEGKITPTNQPSAQTTRLTALQLSTDHSTSIEEEVRRIKNEHPDDKQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDALLEMFRNEYIGTAPYLSCLPSLRHHRLCPTDQFIVLSSDGLYQYLTNQEVVSYVENFMEKFPDGDPAQHLIEELLCRAARKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL* 814
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25615092 25621230 + Chy6G126570.1 Chy06g02129 229838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02129 813 CDD PP2Cc 513 801 IPR001932 -
Chy06g02129 813 SMART PP2C_4 267 799 IPR001932 -
Chy06g02129 813 MobiDBLite consensus disorder prediction 64 91 - -
Chy06g02129 813 PANTHER PROTEIN PHOSPHATASE 2C 21 811 IPR015655 GO:0004722|GO:0006470
Chy06g02129 813 MobiDBLite consensus disorder prediction 64 93 - -
Chy06g02129 813 SUPERFAMILY PP2C-like 279 802 IPR036457 -
Chy06g02129 813 ProSiteProfiles PPM-type phosphatase domain profile. 267 801 IPR001932 -
Chy06g02129 813 Pfam Protein phosphatase 2C 528 594 IPR001932 -
Chy06g02129 813 Pfam Protein phosphatase 2C 634 766 IPR001932 -
Chy06g02129 813 Gene3D - 253 808 IPR036457 -
Chy06g02129 813 PANTHER PROTEIN PHOSPHATASE 2C 29 21 811 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00699 Chy-Chr6:4771728 Chy06g02129 Chy-Chr6:25615092 7.91E-15 dispersed
Chy06g02129 Chy-Chr6:25615092 Chy08g00754 Chy-Chr8:15251821 3.06E-39 dispersed
Chy06g02129 Chy-Chr6:25615092 Chy11g01233 Chy-Chr11:18459664 3.78E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02129 - - csv:101202795 1555.81