Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02135 ATGGCTGGGTTGGATTTAGGGAGTCGATATCTAACTCACCTTCAACCACAAGTAGACGGTGGTCATTTCTCCTCCGGTGACCACCAAGACGATGACGATCCTCACCAAACCCTAGGTGGTACGGGGGATGTTGTTGGCCGTCGTCCACGCGGTCGGCCACCCGGTTCGAAAAACAAGCCAAAGCCGCCGGTTATCATCACCCGTGAGAGCGCCAACACGCTTCGTGTCCACATCTTAGAAGTTGGCAGCGGCTGCGATGTTTTCGATTGCGTCGCTTCCTACGCCCGCCGACGACAGCGTGGGATCTGTATTTTGAGCGGTAGCGGTAACGTCACGAACGTCGGTCTCCGCCAGCCAGCCGCAGCTGGGGTGTTGACTCTTCAAGGGAGGTTTGAAATTTTGTCGTTGTCGGGATCGTTTCTGCCGCCGCCTGCTCCACCCGGTGCGACGAGTTTGACGATATTTTTAGCCGGAGGGCAGGGGCAAGTAGTGGGAGGGACGGTTGCTGGTGAATTGACAGCGGCCGGGCCGGTGATTTTGATTGCAGCTTCGTTTACGAATGTGGCGTATGAGAGATTGCCATTGGATGAGGAGGATCAGCAACAAACTCCTGCAGGCGGCGGAGGGAGCGGCGGCGGAGTTGGTAACAACAACAATAATAATCCATTTCAAGACCCATCAAATTCAGGACTTCCATTCTTGAATTTGCCACTTCATATGCAAAATGTTCAACTTCCGCCCTTTTGA 747 54.22 MAGLDLGSRYLTHLQPQVDGGHFSSGDHQDDDDPHQTLGGTGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVGSGCDVFDCVASYARRRQRGICILSGSGNVTNVGLRQPAAAGVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFTNVAYERLPLDEEDQQQTPAGGGGSGGGVGNNNNNNPFQDPSNSGLPFLNLPLHMQNVQLPPF* 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25683354 25684100 + Chy6G126630.1 Chy06g02135 229844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02135 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 32 247 - -
Chy06g02135 248 MobiDBLite consensus disorder prediction 199 231 - -
Chy06g02135 248 ProSiteProfiles PPC domain profile profile. 71 207 IPR005175 -
Chy06g02135 248 PIRSF ESCAROLA 9 244 IPR014476 GO:0003680
Chy06g02135 248 MobiDBLite consensus disorder prediction 16 65 - -
Chy06g02135 248 Gene3D - 74 203 - -
Chy06g02135 248 MobiDBLite consensus disorder prediction 203 231 - -
Chy06g02135 248 CDD DUF296 75 185 IPR005175 -
Chy06g02135 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 32 247 IPR014476 GO:0003680
Chy06g02135 248 Pfam Plants and Prokaryotes Conserved (PCC) domain 75 187 IPR005175 -
Chy06g02135 248 SUPERFAMILY AF0104/ALDC/Ptd012-like 71 200 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g00082 Chy06g02135 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g02135 Chy-Chr6:25683354 Chy11g01953 Chy-Chr11:25567509 3.58E-94 dispersed
Chy04g00082 Chy-Chr4:850886 Chy06g02135 Chy-Chr6:25683354 8.58E-90 wgd
Chy06g00280 Chy-Chr6:1884621 Chy06g02135 Chy-Chr6:25683354 7.18E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02135 - - csv:101210132 431.024