Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02143 ATGACGGATTATCGTTTGTCGACCATGAATCTCTGGACTGACGAGAACGCGTCGGTTATGGACGCTTTCATGAATTCCGATCTATCTTCCTACTGGGCTCCATCAGCCGCCTCCTCTCACTCTCTTCACCACCCACCGCCACCTCAGTCCTCCGCCTCCACATCCACTCCCCCACCGGACCCACCCAAGTCCCTCCCCGTTTTCAATCAGGAGACTCTGCAGCAGCGGCTCCAGGCGTTGATCGACGGTGCTAGGGAGAGTTGGACTTATGCGATTTTCTGGCAGTCGTCTTATGATTATTCTGGTGGGTCTGTTTTGGGGTGGGGTGATGGGTATTACAAAGGAGAGGAAGATAAAGGAAAGGGAAAAGCGAAAATGGTGTCGTCAGCGGCGGAGCAGGCTCACCGGAAGAAGGTTTTACGGGAGCTTAACTCTTTGATTTCTGGCTCTGCCGCCGGACCTGACGATGCGGTGGATGAGGAGGTTACGGATACGGAGTGGTTCTTTTTGGTTTCGATGACTCAGTCGTTTGTTAATGGTGTTGGGTTACCGAGTCAAGCGTTTTACCACTCGACGCCGATTTGGGTCTCTGGTGCCGATCGGCTGTCGGCGTCTGACTGTGAACGAGCTAGACAGGGGAGGGTTTTTGGGTTACAGACGATGGTCTGTATTCCATCGCCTAACGGTGTTGTGGAAATGGGTTCGACGGAATTGATTCATCGAACATCGGATTTGATGAATAAGGTCAAGATTCTGTTCAATTTCAATAATCTCGAAACGAGTTCTTGGATTTCGGGAACTACCGCCGCCGCATCCGCTGCCGACGAAGGGGAAAACGACCCGTCGTCGATGTGGATCAGTGAGCCATCGAGTACAATCGAGATGAAAAATTCAATCACCACCACCGTCCCTTCCGGCAACGTTCCGGCAAAGCCAATCCGTTCGGAAAATCCCAGTTCAAGTAGCTTAACGGAAAATATGAGCACGATTCAACAATCCCATCATAAACAGAGCCAAAGCTTTTTGAATTTCTCCGATTACGGCTTCGAATCAAATCCCACAAAGAACACCACCGCCACCGCCACCGCAACCACCAGCACCACCCCATCATTCAAGCCGGAATCCGGCGGGATTCTGAATTTCGGCAACGGAAGCCTCTTCTCCGGCCATTCACAGTACGTAACAAACGAACAGAACGAGAAAAAGAGATCCCCTGCTTCTCGAAGTAGCAACGACGAAGGGATCCTCTCTTTCACGTCCGGCGTGATCTTACCCTCTTCCGGTAAGGTAAAATCCGGCGATTCAGACCACTCAGATCTCGAAGCATCAGTGATCAGAGAAGTGGATAGCTGTACAAAATCATTAGAACCCGAAAAACGTCCAAGAAAAAGAGGTAGAAAACCAGCAAACGGAAGAGAAGAGCCATTGAATCACGTAGAAGCAGAGAGACAACGGCGAGAGAAATTAAACCAGAAATTCTACGCTCTCCGAGCTGTAGTTCCAAACGTATCTAAAATGGACAAAGCCTCACTACTAGGTGACGCGGTTTCGTACATAAACGAGCTCAAATCGAAGCTCCAAATGGCAGAATCGGAGAAAACAGATATGGGAAAACATCTAGAATTGCTGAAGAAGGAGATGGGAGGGAAAGATTTAGGATGTTACTCAAACCCAAATGATGAAGATCTGAAAACAGGGAAAAGAAAGGTAATGGATATGGAGATTGAAGTTAAAATCATGGGTTGGGATGCGATGATAAGGATTCAAAGCAACAAGAAGAATCATCCGGCGGCGAGGTTGATGACGGCGTTTAAGGATTTGGATTTAGAAATGCTTCACGCCAGTGTTTCTGTAGTGAATGATTTGATGATTCAACAAGCAACAGTGAAGATGGGGAGCAGATTTTACACACAAGAGCAGCTTAAAATGGCTCTTGTCGCCCGAGTCGGCGGTGGTGGAAGTGGAGGCGGCGGTGGAATCATGTAA 1986 48.79 MTDYRLSTMNLWTDENASVMDAFMNSDLSSYWAPSAASSHSLHHPPPPQSSASTSTPPPDPPKSLPVFNQETLQQRLQALIDGARESWTYAIFWQSSYDYSGGSVLGWGDGYYKGEEDKGKGKAKMVSSAAEQAHRKKVLRELNSLISGSAAGPDDAVDEEVTDTEWFFLVSMTQSFVNGVGLPSQAFYHSTPIWVSGADRLSASDCERARQGRVFGLQTMVCIPSPNGVVEMGSTELIHRTSDLMNKVKILFNFNNLETSSWISGTTAAASAADEGENDPSSMWISEPSSTIEMKNSITTTVPSGNVPAKPIRSENPSSSSLTENMSTIQQSHHKQSQSFLNFSDYGFESNPTKNTTATATATTSTTPSFKPESGGILNFGNGSLFSGHSQYVTNEQNEKKRSPASRSSNDEGILSFTSGVILPSSGKVKSGDSDHSDLEASVIREVDSCTKSLEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNVSKMDKASLLGDAVSYINELKSKLQMAESEKTDMGKHLELLKKEMGGKDLGCYSNPNDEDLKTGKRKVMDMEIEVKIMGWDAMIRIQSNKKNHPAARLMTAFKDLDLEMLHASVSVVNDLMIQQATVKMGSRFYTQEQLKMALVARVGGGGSGGGGGIM* 662
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 25749137 25751122 - Chy6G126710.1 Chy06g02143 229852
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02143 661 Pfam Helix-loop-helix DNA-binding domain 477 522 IPR011598 GO:0046983
Chy06g02143 661 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 73 253 IPR025610 -
Chy06g02143 661 MobiDBLite consensus disorder prediction 36 67 - -
Chy06g02143 661 PANTHER MYC 11 649 IPR045084 GO:0003700|GO:0006355
Chy06g02143 661 MobiDBLite consensus disorder prediction 50 65 - -
Chy06g02143 661 PANTHER TRANSCRIPTION FACTOR MYC2 11 649 - -
Chy06g02143 661 SMART finulus 479 528 IPR011598 GO:0046983
Chy06g02143 661 MobiDBLite consensus disorder prediction 395 414 - -
Chy06g02143 661 MobiDBLite consensus disorder prediction 353 374 - -
Chy06g02143 661 MobiDBLite consensus disorder prediction 302 326 - -
Chy06g02143 661 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 473 522 IPR011598 GO:0046983
Chy06g02143 661 Coils Coil 526 546 - -
Chy06g02143 661 CDD bHLH_AtAIB_like 470 546 - -
Chy06g02143 661 MobiDBLite consensus disorder prediction 426 483 - -
Chy06g02143 661 MobiDBLite consensus disorder prediction 353 377 - -
Chy06g02143 661 Gene3D - 472 549 IPR036638 GO:0046983
Chy06g02143 661 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 476 542 IPR036638 GO:0046983
Chy06g02143 661 MobiDBLite consensus disorder prediction 432 483 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Chy04g00093 Chy06g02143 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00794 Chy-Chr2:4964598 Chy06g02143 Chy-Chr6:25749137 1.06E-17 dispersed
Chy02g00795 Chy-Chr2:4971976 Chy06g02143 Chy-Chr6:25749137 4.13E-16 dispersed
Chy06g02143 Chy-Chr6:25749137 Chy06g02223 Chy-Chr6:26401561 4.90E-21 dispersed
Chy12g00103 Chy-Chr12:1118448 Chy06g02143 Chy-Chr6:25749137 2.19E-08 dispersed
Chy01g00164 Chy-Chr1:1134875 Chy06g02143 Chy-Chr6:25749137 1.15E-17 transposed
Chy03g01342 Chy-Chr3:16392434 Chy06g02143 Chy-Chr6:25749137 5.20E-14 transposed
Chy04g00104 Chy-Chr4:972765 Chy06g02143 Chy-Chr6:25749137 3.72E-11 transposed
Chy04g01067 Chy-Chr4:15999752 Chy06g02143 Chy-Chr6:25749137 3.37E-13 transposed
Chy05g00628 Chy-Chr5:7720842 Chy06g02143 Chy-Chr6:25749137 1.75E-09 transposed
Chy05g01131 Chy-Chr5:15809475 Chy06g02143 Chy-Chr6:25749137 1.02E-12 transposed
Chy06g00006 Chy-Chr6:34274 Chy06g02143 Chy-Chr6:25749137 1.52E-12 transposed
Chy06g00092 Chy-Chr6:623456 Chy06g02143 Chy-Chr6:25749137 6.91E-47 transposed
Chy06g00371 Chy-Chr6:2484401 Chy06g02143 Chy-Chr6:25749137 1.19E-16 transposed
Chy11g01724 Chy-Chr11:23669055 Chy06g02143 Chy-Chr6:25749137 2.20E-25 transposed
Chy04g00093 Chy-Chr4:902982 Chy06g02143 Chy-Chr6:25749137 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18235 PF14215 bHLH-MYC_N 9.10E-53 CL0161 Chy TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02143 K13422 - csv:101205372 1171.76