Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02157 ATGGTTTCGAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCCCCAACTTTTGGCCTTGGCCGAGAGAGGAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGTGTCTTGTCTGAGCTTGATGATGATAGCTGTAACAGCACTGGCTCGGATGCCCCTTCGTCGGTGTCACAAGACCGGATGATCATTGTTGGAAATCAGCTCCCTATTCGAGCGAATCGGGACGAGAATGGAAACTGGGAGTTTAGTATGGATGAGGATTCACTTCTTTTACAGCTTAAAGATGGGCTCGGAGAAGATGTGGAAGTGATTTATATTGGTTGTCTTAGAGAGGAGGTTGATCCAAGGGAGCAAGACGATGTTGCACAAACTCTTTTGGACCGATTCAAGTGCGTCCCGACGTTCCTTCCTCCGGAGCTTTTTAGTAAATTTTATCATGGATTCTGCAAGCAACATTTATGGCCACTGTTTCACTATATGCTTCCTCTGTCCCCGGATCTTGGTGGCCGATTTGATCGGTCTCTTTGGCAAGCGTATCTTTCGGTGAATAAGATATTTGCAGATAAAGTTATGGAAGTGATTAGTCCTGATGATGACTTTGTTTGGGTTCATGATTACCATTTGATGGTTTTGCCAACATTTTTGAGGAAGAGGTTTAACAGAGTGAAACTTGGATTCTTCCTACACAGTCCATTTCCTTCATCTGAGATTTATCGAACACTTCCCGTTAGAGATGAACTTCTTCGGGCACTATTGAACTCTGATCTTATCGGCTTCCATACGTTTGATTATGCTAGGCATTTTTTATCTTGCTGCAGCAGAATGCTTGGTCTGTCTTACCAATCTAAGCGAGGTTACATCGGGCTTGAATACTATGGTCGTACTGTGAGCATTAAGATTCTTCCTGTCGGTATTCATATAGGCCAACTCCAAAATGTTTTGAATCTCCCTGAGACTGTATCTAAAGTCGCAGAACTGCAAGACCGGTTCAAGGGTCAAACTGTTTTGCTTGGGGTTGATGATATGGACATTTTTAAGGGGATCAGCTTGAAACTTTTGGCATTTGAACAATTGCTCCGGCAACATCCTGAGAGATGGGGTAAAGCTGTGTTAGTACAGATTGCGAACCCTGCAAGAGGCAGAGGCAAAGATGTACAGGAGGTTGTGGCTGAAACTACTGCAACAGTGGATAGAATCAACACAACATTCAGAAGGCCAGGATATGAGCCTGTCGTTTTGATAAACACACCCTTGCAGTTTTACGAGCGAATCGCTTACTATGCAATTGCTGAGTGCTGCCTTGTTACTGCAGTGAGAGATGGGATGAATCTTATACCTTACGAATATATTATATGTCGACAAGGCAATGAGAAGCTTGACGATGTTCTTGGGCTAAATCCTTCAACTGCAAAGAAGAGCATGTTAGTCTTGTCTGAGTTTATTGGGTGTTCCCCATCTCTCAGTGGAGCTATTCGGGTTAACCCATGGAATATTGAAGCTGTCACCGAAGCAATGGATTCTGCACTGGTAATTCCCGAGGCAGAAAAGCAACTGCGACATGAAAAGCATTATAGGTATGTTAGCACACATGATGTGGCATATTGGGCACGCAGCTTTCTGCAGGATCTGGGCAGGGCGTGTAGAGACCATTCAATGAGGAGGTGCTGGGGCATAGGTTTTGGTTTAGGATTTCGGGTTATTGCCCTGGATCCAGATTTTAGGAAGCTTTCAGTTGATCATATTGTTTCAGTGTATAAGAGAACAGGCTACCGAGCAATTTTGTTAGATTATGATGGTATCATGACGCTTCCTGGATCAATTAGCATGAATCCAACTTCAGAAGCCCTTGGAATCTTGAACAACTTGTGTAAAGATCCTAAAAATGTTGTGTTCCTTGTTAGTGGGAAGGACCGAAAAACTTTGACTGAATGGTTTTCACCATGCGAAAAGCTTGGACTAGCTGCAGAACATGGTTTTTATCTTAGGCCAAATCAAACTGCAGATTGGGAGACATGTGTAGCTGTGACCGATTTTGACTGGAAACAGATTGCAGAACCCGTTATGCAATTGTATACTGAGACAACTGATGGCTCTACAATTGAAACTAAAGAGAGTGCGCTTGTTTGGAACTATCTTTATGCGGATCCTGATTTCGGATCGTGCCAGGCCAAGGAACTTTTAGATCACCTTGAAAGTGTTCTAGCCAATGAACCAGTTTCTGTCAAGAGTGGCCAACACATTGTAGAAGTCAAACCTCAGGGTGTAAACAAGGGCATTGTAGCAGAATATCTCTTGCAAACAATGAAGGAGAAGGGAATGCTTCCCGATTTCGTTCTATGCATTGGAGACGACAGGTCAGACGAGGACATGTTCGAGGTGATAATGAATGCAAAAGCCAGCCTTTCTCCAGGTGCTGAAGTGTTCGGTTGCACCGTTGGCCAGAAACCGAGCAAGGCCAGGTATTACTTGGAAGACACACACGAAATCTTGAGAATGTTACAGGGTCTTACCCACGCGTCTGAGCACGCCACTAGAGCTGCTCCGCAGACGACGGCTCGTAGAGTGGTAATTGCAGAGAGTAAATAA 2595 44.35 MVSRSYSNLLELASGGCSPTFGLGRERKRLPRVATVAGVLSELDDDSCNSTGSDAPSSVSQDRMIIVGNQLPIRANRDENGNWEFSMDEDSLLLQLKDGLGEDVEVIYIGCLREEVDPREQDDVAQTLLDRFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQNVLNLPETVSKVAELQDRFKGQTVLLGVDDMDIFKGISLKLLAFEQLLRQHPERWGKAVLVQIANPARGRGKDVQEVVAETTATVDRINTTFRRPGYEPVVLINTPLQFYERIAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDDVLGLNPSTAKKSMLVLSEFIGCSPSLSGAIRVNPWNIEAVTEAMDSALVIPEAEKQLRHEKHYRYVSTHDVAYWARSFLQDLGRACRDHSMRRCWGIGFGLGFRVIALDPDFRKLSVDHIVSVYKRTGYRAILLDYDGIMTLPGSISMNPTSEALGILNNLCKDPKNVVFLVSGKDRKTLTEWFSPCEKLGLAAEHGFYLRPNQTADWETCVAVTDFDWKQIAEPVMQLYTETTDGSTIETKESALVWNYLYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGIVAEYLLQTMKEKGMLPDFVLCIGDDRSDEDMFEVIMNAKASLSPGAEVFGCTVGQKPSKARYYLEDTHEILRMLQGLTHASEHATRAAPQTTARRVVIAESK* 865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25872096 25875409 - Chy6G126850.1 Chy06g02157 229866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02157 864 CDD HAD_TPP 595 831 - -
Chy06g02157 864 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 846 IPR001830 GO:0003824|GO:0005992
Chy06g02157 864 SUPERFAMILY HAD-like 594 839 IPR036412 -
Chy06g02157 864 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Chy06g02157 864 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 596 798 IPR006379 -
Chy06g02157 864 Gene3D Glycogen Phosphorylase B; 315 531 - -
Chy06g02157 864 Pfam Trehalose-phosphatase 597 829 IPR003337 GO:0003824|GO:0005992
Chy06g02157 864 Gene3D Glycogen Phosphorylase B; 56 314 - -
Chy06g02157 864 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Chy06g02157 864 Gene3D - 723 854 IPR023214 -
Chy06g02157 864 Gene3D - 593 710 IPR023214 -
Chy06g02157 864 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 846 - -
Chy06g02157 864 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Chy06g02157 864 TIGRFAM T6PP: trehalose-phosphatase 594 840 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00214 Chy-Chr2:1426609 Chy06g02157 Chy-Chr6:25872096 0 dispersed
Chy02g02567 Chy-Chr2:28885919 Chy06g02157 Chy-Chr6:25872096 0 dispersed
Chy06g02157 Chy-Chr6:25872096 Chy12g00042 Chy-Chr12:356437 3.07E-145 dispersed
Chy06g02157 Chy-Chr6:25872096 Chy10g00918 Chy-Chr10:14841488 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02157 K16055 - csv:101207192 1727.99