Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g02157 | ATGGTTTCGAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCCCCAACTTTTGGCCTTGGCCGAGAGAGGAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGTGTCTTGTCTGAGCTTGATGATGATAGCTGTAACAGCACTGGCTCGGATGCCCCTTCGTCGGTGTCACAAGACCGGATGATCATTGTTGGAAATCAGCTCCCTATTCGAGCGAATCGGGACGAGAATGGAAACTGGGAGTTTAGTATGGATGAGGATTCACTTCTTTTACAGCTTAAAGATGGGCTCGGAGAAGATGTGGAAGTGATTTATATTGGTTGTCTTAGAGAGGAGGTTGATCCAAGGGAGCAAGACGATGTTGCACAAACTCTTTTGGACCGATTCAAGTGCGTCCCGACGTTCCTTCCTCCGGAGCTTTTTAGTAAATTTTATCATGGATTCTGCAAGCAACATTTATGGCCACTGTTTCACTATATGCTTCCTCTGTCCCCGGATCTTGGTGGCCGATTTGATCGGTCTCTTTGGCAAGCGTATCTTTCGGTGAATAAGATATTTGCAGATAAAGTTATGGAAGTGATTAGTCCTGATGATGACTTTGTTTGGGTTCATGATTACCATTTGATGGTTTTGCCAACATTTTTGAGGAAGAGGTTTAACAGAGTGAAACTTGGATTCTTCCTACACAGTCCATTTCCTTCATCTGAGATTTATCGAACACTTCCCGTTAGAGATGAACTTCTTCGGGCACTATTGAACTCTGATCTTATCGGCTTCCATACGTTTGATTATGCTAGGCATTTTTTATCTTGCTGCAGCAGAATGCTTGGTCTGTCTTACCAATCTAAGCGAGGTTACATCGGGCTTGAATACTATGGTCGTACTGTGAGCATTAAGATTCTTCCTGTCGGTATTCATATAGGCCAACTCCAAAATGTTTTGAATCTCCCTGAGACTGTATCTAAAGTCGCAGAACTGCAAGACCGGTTCAAGGGTCAAACTGTTTTGCTTGGGGTTGATGATATGGACATTTTTAAGGGGATCAGCTTGAAACTTTTGGCATTTGAACAATTGCTCCGGCAACATCCTGAGAGATGGGGTAAAGCTGTGTTAGTACAGATTGCGAACCCTGCAAGAGGCAGAGGCAAAGATGTACAGGAGGTTGTGGCTGAAACTACTGCAACAGTGGATAGAATCAACACAACATTCAGAAGGCCAGGATATGAGCCTGTCGTTTTGATAAACACACCCTTGCAGTTTTACGAGCGAATCGCTTACTATGCAATTGCTGAGTGCTGCCTTGTTACTGCAGTGAGAGATGGGATGAATCTTATACCTTACGAATATATTATATGTCGACAAGGCAATGAGAAGCTTGACGATGTTCTTGGGCTAAATCCTTCAACTGCAAAGAAGAGCATGTTAGTCTTGTCTGAGTTTATTGGGTGTTCCCCATCTCTCAGTGGAGCTATTCGGGTTAACCCATGGAATATTGAAGCTGTCACCGAAGCAATGGATTCTGCACTGGTAATTCCCGAGGCAGAAAAGCAACTGCGACATGAAAAGCATTATAGGTATGTTAGCACACATGATGTGGCATATTGGGCACGCAGCTTTCTGCAGGATCTGGGCAGGGCGTGTAGAGACCATTCAATGAGGAGGTGCTGGGGCATAGGTTTTGGTTTAGGATTTCGGGTTATTGCCCTGGATCCAGATTTTAGGAAGCTTTCAGTTGATCATATTGTTTCAGTGTATAAGAGAACAGGCTACCGAGCAATTTTGTTAGATTATGATGGTATCATGACGCTTCCTGGATCAATTAGCATGAATCCAACTTCAGAAGCCCTTGGAATCTTGAACAACTTGTGTAAAGATCCTAAAAATGTTGTGTTCCTTGTTAGTGGGAAGGACCGAAAAACTTTGACTGAATGGTTTTCACCATGCGAAAAGCTTGGACTAGCTGCAGAACATGGTTTTTATCTTAGGCCAAATCAAACTGCAGATTGGGAGACATGTGTAGCTGTGACCGATTTTGACTGGAAACAGATTGCAGAACCCGTTATGCAATTGTATACTGAGACAACTGATGGCTCTACAATTGAAACTAAAGAGAGTGCGCTTGTTTGGAACTATCTTTATGCGGATCCTGATTTCGGATCGTGCCAGGCCAAGGAACTTTTAGATCACCTTGAAAGTGTTCTAGCCAATGAACCAGTTTCTGTCAAGAGTGGCCAACACATTGTAGAAGTCAAACCTCAGGGTGTAAACAAGGGCATTGTAGCAGAATATCTCTTGCAAACAATGAAGGAGAAGGGAATGCTTCCCGATTTCGTTCTATGCATTGGAGACGACAGGTCAGACGAGGACATGTTCGAGGTGATAATGAATGCAAAAGCCAGCCTTTCTCCAGGTGCTGAAGTGTTCGGTTGCACCGTTGGCCAGAAACCGAGCAAGGCCAGGTATTACTTGGAAGACACACACGAAATCTTGAGAATGTTACAGGGTCTTACCCACGCGTCTGAGCACGCCACTAGAGCTGCTCCGCAGACGACGGCTCGTAGAGTGGTAATTGCAGAGAGTAAATAA | 2595 | 44.35 | MVSRSYSNLLELASGGCSPTFGLGRERKRLPRVATVAGVLSELDDDSCNSTGSDAPSSVSQDRMIIVGNQLPIRANRDENGNWEFSMDEDSLLLQLKDGLGEDVEVIYIGCLREEVDPREQDDVAQTLLDRFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQNVLNLPETVSKVAELQDRFKGQTVLLGVDDMDIFKGISLKLLAFEQLLRQHPERWGKAVLVQIANPARGRGKDVQEVVAETTATVDRINTTFRRPGYEPVVLINTPLQFYERIAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDDVLGLNPSTAKKSMLVLSEFIGCSPSLSGAIRVNPWNIEAVTEAMDSALVIPEAEKQLRHEKHYRYVSTHDVAYWARSFLQDLGRACRDHSMRRCWGIGFGLGFRVIALDPDFRKLSVDHIVSVYKRTGYRAILLDYDGIMTLPGSISMNPTSEALGILNNLCKDPKNVVFLVSGKDRKTLTEWFSPCEKLGLAAEHGFYLRPNQTADWETCVAVTDFDWKQIAEPVMQLYTETTDGSTIETKESALVWNYLYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGIVAEYLLQTMKEKGMLPDFVLCIGDDRSDEDMFEVIMNAKASLSPGAEVFGCTVGQKPSKARYYLEDTHEILRMLQGLTHASEHATRAAPQTTARRVVIAESK* | 865 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 25872096 | 25875409 | - | Chy6G126850.1 | Chy06g02157 | 229866 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g02157 | 864 | CDD | HAD_TPP | 595 | 831 | - | - | |
Chy06g02157 | 864 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 1 | 846 | IPR001830 | GO:0003824|GO:0005992 | |
Chy06g02157 | 864 | SUPERFAMILY | HAD-like | 594 | 839 | IPR036412 | - | |
Chy06g02157 | 864 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 63 | 550 | - | - | |
Chy06g02157 | 864 | TIGRFAM | HAD-SF-IIB: HAD hydrolase, family IIB | 596 | 798 | IPR006379 | - | |
Chy06g02157 | 864 | Gene3D | Glycogen Phosphorylase B; | 315 | 531 | - | - | |
Chy06g02157 | 864 | Pfam | Trehalose-phosphatase | 597 | 829 | IPR003337 | GO:0003824|GO:0005992 | |
Chy06g02157 | 864 | Gene3D | Glycogen Phosphorylase B; | 56 | 314 | - | - | |
Chy06g02157 | 864 | Pfam | Glycosyltransferase family 20 | 63 | 546 | IPR001830 | GO:0003824|GO:0005992 | |
Chy06g02157 | 864 | Gene3D | - | 723 | 854 | IPR023214 | - | |
Chy06g02157 | 864 | Gene3D | - | 593 | 710 | IPR023214 | - | |
Chy06g02157 | 864 | PANTHER | ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 | 1 | 846 | - | - | |
Chy06g02157 | 864 | CDD | GT20_TPS | 63 | 546 | IPR001830 | GO:0003824|GO:0005992 | |
Chy06g02157 | 864 | TIGRFAM | T6PP: trehalose-phosphatase | 594 | 840 | IPR003337 | GO:0003824|GO:0005992 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g00214 | Chy-Chr2:1426609 | Chy06g02157 | Chy-Chr6:25872096 | 0 | dispersed | |
Chy02g02567 | Chy-Chr2:28885919 | Chy06g02157 | Chy-Chr6:25872096 | 0 | dispersed | |
Chy06g02157 | Chy-Chr6:25872096 | Chy12g00042 | Chy-Chr12:356437 | 3.07E-145 | dispersed | |
Chy06g02157 | Chy-Chr6:25872096 | Chy10g00918 | Chy-Chr10:14841488 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g02157 | K16055 | - | csv:101207192 | 1727.99 |