Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02175 ATGACAGAAACAAAGCGTATGAGCAAACAGTTTGCTAGAAGCATACCTCAAATTAGTATATGTGTTCAAAGGAACCTGATCACGGATCCAGAGCAAACTACAACCACTAGTGCTGGCACGGTTAATCCTGATTGGTCGGGTTTTCAGGCATATTCACCTATTCCTCCGCATGGTTTCTTGGCGTCAAGCCCCCAGGCTCACCCATATATGTGGGGAGTTCAGCATATTATGCCTCCTTATGGCACGCCTCCACATCCATATGTTGCAATGTATCCACCTGGTGGCCTATATGCTCACCCTTCCATGCCCCCGGGATCATATCCTTTTAGCCCATTTGCAATGCCTTCTCCGAATGGCGTCACTGAGGCCTCTGGTAATACGGCAGGCAGTTTGGAGGGAGACATTAAGCCACCTGAAGTAAAGGAAAAGCTGCCAATTAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAACATGATTACAGGGAAGAACAATGAGCTGGGTAAAACATCTGGAACATCTGCCAACGGAGCATACTCTAAGAGTGCTGAGAGTGGCAGTGAAGGTACAAGTGAAGGAAGTGATGCCAATTCTCAAAATGAATCACAACCTAAGTTAGGTTCCAGGCAAGACAGTTTGGAAGTTGAAGTATCTCAGAACGGTAACTCAATGCATAGTACTCAAAATGGAGGATCTAATACTCAGGCTATGGCTGTCATCCCATTGGCAACTGCTGGGGCCCCAGGAGTTGTTCCCGGTCCAACGACCAACTTAAATATTGGAATGGACTATTGGGGCGCATCATCCGCTATCCCTGCAATGCGTGGGAAGGTTCAATCGACTCCAGTTGCTGGAGGACTAGTTACCACTGGATCTCGGGATAGCATACAGTCACAGCTTTGGCTGCAGGATGAGAGAGAGCTTAAAAGACAGAGAAGAAAGCAATCAAATAGAGAATCTGCACGACGATCTCGGTTACGCAAGCAGGCAGAATGTGATGAATTAGCCCACCGAGCAGAAGCCTTACAAGAAGAAAATGCCAGTCTTAGGTCTGAAGTTAACCGGATAAGGAGTGAATATGAACAGCTACTTTCGGAGAACGCTTCTCTGAAGGAAAGACTCGGGGAAGTTTCGGGAAACGAAGAACTAAGGACCAGCAGGAACGGCCTGCGTACAAATAACGAAACCACCACACAACCTACAGAGTCAGAGGTCGTGCAAGTTGGTAACAAGAATTGA 1236 46.93 MTETKRMSKQFARSIPQISICVQRNLITDPEQTTTTSAGTVNPDWSGFQAYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPPGGLYAHPSMPPGSYPFSPFAMPSPNGVTEASGNTAGSLEGDIKPPEVKEKLPIKRSKGSLGSLNMITGKNNELGKTSGTSANGAYSKSAESGSEGTSEGSDANSQNESQPKLGSRQDSLEVEVSQNGNSMHSTQNGGSNTQAMAVIPLATAGAPGVVPGPTTNLNIGMDYWGASSAIPAMRGKVQSTPVAGGLVTTGSRDSIQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAHRAEALQEENASLRSEVNRIRSEYEQLLSENASLKERLGEVSGNEELRTSRNGLRTNNETTTQPTESEVVQVGNKN* 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26032096 26035667 - Chy6G127030.1 Chy06g02175 229884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02175 411 CDD bZIP_plant_GBF1 309 359 IPR045314 GO:0003700|GO:0006355
Chy06g02175 411 Pfam bZIP transcription factor 304 366 IPR004827 GO:0003700|GO:0006355
Chy06g02175 411 SMART brlzneu 304 368 IPR004827 GO:0003700|GO:0006355
Chy06g02175 411 MobiDBLite consensus disorder prediction 118 231 - -
Chy06g02175 411 MobiDBLite consensus disorder prediction 153 231 - -
Chy06g02175 411 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 306 369 IPR004827 GO:0003700|GO:0006355
Chy06g02175 411 Coils Coil 324 379 - -
Chy06g02175 411 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 311 326 IPR004827 GO:0003700|GO:0006355
Chy06g02175 411 MobiDBLite consensus disorder prediction 306 327 - -
Chy06g02175 411 Pfam Disordered region downstream of MFMR 142 268 - -
Chy06g02175 411 MobiDBLite consensus disorder prediction 380 411 - -
Chy06g02175 411 SUPERFAMILY Leucine zipper domain 307 363 IPR046347 GO:0003700|GO:0006355
Chy06g02175 411 PANTHER BZIP TRANSCRIPTION FACTOR 68 32 398 - -
Chy06g02175 411 PANTHER G-BOX-BINDING FACTOR 3-RELATED 32 398 IPR044827 GO:0003700|GO:0006355|GO:0043565
Chy06g02175 411 Gene3D - 307 361 - -
Chy06g02175 411 MobiDBLite consensus disorder prediction 372 411 - -
Chy06g02175 411 Pfam G-box binding protein MFMR 28 103 IPR012900 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g00130 Chy06g02175 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00123 Chy-Chr6:815385 Chy06g02175 Chy-Chr6:26032096 5.37E-44 dispersed
Chy06g02175 Chy-Chr6:26032096 Chy10g01085 Chy-Chr10:15951534 6.95E-12 dispersed
Chy02g00666 Chy-Chr2:4041247 Chy06g02175 Chy-Chr6:26032096 1.35E-71 transposed
Chy04g01946 Chy-Chr4:25356021 Chy06g02175 Chy-Chr6:26032096 3.06E-08 transposed
Chy04g00130 Chy-Chr4:1169547 Chy06g02175 Chy-Chr6:26032096 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18240 PF16596 MFMR_assoc 9.50E-51 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02175 K09060 - csv:101206627 747.273