Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02177 ATGTTAAATTATAGGGATGTACAAAAGAATAGAGCTGGGAAACAGAAGGAAGTTGGAAAGTGGAAAAGTATTGCTGAAGCTCGCCCCGGCGATTTTGAAATTTCAGGAAGCAGCGATTGGAAAATCAAGAAATTTAGCTACGATTTCACGCTAGAATCGAAAGCGTTCAATAGGAAGTTGTACAGGTATAGAATGATCGATCTGTTTCTACTAGAGTCCACCTTCAATGACGAACAGGATGTTAGCTCTGCGAAGTTGAGAATTTCTCTGTTAAGTGAATTAGAATCTGTTTTGTGGAAGTTGCTGACTTGTGGAGGACGGTCGGAGGTTCGATTATGGCTTTCTAATACCATAGCCAGTGTGACATCGATCAGTCCCCAGCATCAGCGGGACCTCTTTATGACATTACTGAGACGGAAGCCATTGAAGTGGGCCCTTGCTTCTCAATTACTGCAAATGTTGTTTGAAAAGAGGTCAAGGGAGACAGGGATTCTCATTGCTAAGAGAAGCTACATAATGGAAAAGTTTTTCGAAGGAAACCCAAGACGAATATCTCAGTGGTTTTCCAATTTTGCCACAAATGGTGCATCAGATCATGGAAAAGGTGCCAAGGCCTTAGCACAGTTTGCTTTTGTAAATAGAGACATTTGTTGGGAGGAGCTTGAGTGGAAAGGGAAACATGGGCAGTCACCTGCCGTGGTTGCAACAAAGCCCCATTATTTTCTTGATCTGGATGTGCATCAAACTGTGAAGAATTTCATTCAGAATGTACCAGAGTTTTGGTCTTCCAATGAATTTGCCGAGTCACTAAAAGATGGTGAAATTTTGTTTCTTGACACGAAATTCTTTGTGAAATATTTCGTTGATTTGATGCTTAAAGATGATCCAAAAGATGTTTGGGAAGTCATTAATGAGTTCCTGATGCATGAGTCATTTTCTTCACTGTGTCAACATCTCCTTGTTACTCTTGAAGAGGCTGATTTCTGCAACTTCCTAAAAATGTTATGCAAACTTCTTAGGCCTAGAATAGAAACCAAGGATTTTGGTAGTTCGTCTTTCATGTTTGAGGTCATACTTACCAAGTATGGTGACTCTGAATCTATTGATCAGATTTTACTATTAAATGCTGTCATTAATCAAGGACGCCAACTTCTACGCCTTTTACGTGATGAAGATGGGGAAGAACAATTGGATGAAATCAAGGCTATTGTCCACAAAATTTCAGCGATCTCAAGCAACAGTCATTGTTTGTTCCCATTGTTAAAGGAGTGTGACGGGAGGAAAAAGACAATAGAGATGATAAAATGGCTAGGGCTTCAGTCTTGGGTTCTTCACTATAGAATGTCAGAGGAATGCCAGACTCCTGAGTTATGGGAATCCTTGTTTGTTGATAACGGCATAGGATTTCGAAAATCTAATGAATATTTGTTGTTGGATCACAGTTGCTCGTCAGAAGATGATGGGTTTGAACTGTATAATAGAGCACGAGCTCAATCTAAGAAGCGAAAAAAGGGGGGGAAAGGTAGAAAAAGAAGAAAAAGGAACTTTGACAGCCAGGATAGCTGTGATGACGAGCTGTTGGACTTTGATATTAAAAATGATAGGGTGGACTTGAAGTTAAACACTGGAAGTTGGTTGCTTTCCACTGATGACTACACTGTACCCTGGAATGCTGAGTATGATCTGAAGCTTCGGATTCGGATTCAGGACGAGAAGATTGGAGATGCGGCTGTGGAGAGCGAGACGTTTTGGACTGCTTGCTCAACGTGCCGGCTTCTGCATCAATTCGAGAAGAGGTACGTAGAGCATACTCTAGTCTGCCCTAGCTGTAGAAAAAGTTTTAAAGCTGTTGACGTTATGTGTAATGAACCTGAGATTAGGGAAATTGGGGTCATGGTTGGGGGTAGAAGGTTGAGGAATTTGAGTTCCAGGCAAAATTTTGGCAGTTTCAAAGGATTAAACGTATCTTTGAATACTGCTCAATCGAAGAGACATGCTGCAGTGAGTAAGATGTATGGTGAGAAGAAGAAATGTCTGGAGTCAAATGGAAAGGCTAGTTCCGTAGAAGGTGAAGTTAGAAATGGCGATTTGGAGGAGGGATTTGATGATGATGATGGGATTTGTGGAAGAAGATTAAGAAGTGGGAGTATGAGGAAGAAGATGAGTAGTGTTGGTGAGGTTTTAGAGAGGTCTAAGCTAAAGCCTGTAAAAATGGAGGAGGAAATGACTTTGGCTGAGTTACAGTCTCAAGTGATTCAGAAATCTCGAAAAGAGAAGATGAAACTGAAGTTAAAAGAGGAGGAGGAAGCAGAAGGAGAGAACAAGAGAAAGAAACTGGTTGAGGAGAATGACAATGACGATGAGAGATTAACTTTGAAAGAGATCGAAGGTCTACTACGGATTCGTCGGCAAGAAACATCAAAGAGTGCTGGGTTTTTGGAGAATGCAAAACAAAGGAGTTCCAAGAAGAATGTGAATCTTGAAACTCAGAAGAAGCAAGGACCTTCATGTAATGGTGTTGATTTGGATATGATGGTGGTGGAAGATTCAGATTTTTATGATTTTGACAAGGACAGAATGGAGAGAAGTTTCAAAAAAGGGCAAGTGTGGGCTGTATATGATGATGACGATGGAATGCCAAGGCATTATGGCTTAATTGAAGAAGTTACTGTAAATCCTTTTGAAGTGAAAATGAGTTGGTTGGATGTTCAAAACAATGGAGATGAAAGACTACTTTGTTGGGAGAAGATGGGATTTCATGTATCTTGTGGTAGATTTAAGGTCACTAAAAAAACAACCATTCATTCATTGAACATTTTTTCTCATGTTGTGGATTGTGAAAGAGCAGCAAAGGAAGTCCATAGGATTTATCCTAAAAAGGGATCAGTATGGGCACTTTACAAAGAAGAAGAAGAAGGTTTGGACGCTGAGAAGAGAAGAAACCTTTCGAATAAAGAGAAACGGACTTACGATATCGCGGTGTTTTTAACAACTCACAGTGAGATGCATGGTTTAAGTATGGCTTATCTTGAGAAGGTTAATGGTTACAAGACCATATTCAAGAGAAGGGAGATTGGTTATCATGCTATTAGATGGTTCGAAAAGGACGATATCCGATTATTTTCGCATCAAATTCCTGCCCGGAAGCTTTCTATAGATGATGCTCTTGGGCAACTGAAGGACTGTTGGGAACTTGATCCAGCTTCTCTTCCCTCGGATTTGCTAACCACCTGCTGA 3237 40.5 MLNYRDVQKNRAGKQKEVGKWKSIAEARPGDFEISGSSDWKIKKFSYDFTLESKAFNRKLYRYRMIDLFLLESTFNDEQDVSSAKLRISLLSELESVLWKLLTCGGRSEVRLWLSNTIASVTSISPQHQRDLFMTLLRRKPLKWALASQLLQMLFEKRSRETGILIAKRSYIMEKFFEGNPRRISQWFSNFATNGASDHGKGAKALAQFAFVNRDICWEELEWKGKHGQSPAVVATKPHYFLDLDVHQTVKNFIQNVPEFWSSNEFAESLKDGEILFLDTKFFVKYFVDLMLKDDPKDVWEVINEFLMHESFSSLCQHLLVTLEEADFCNFLKMLCKLLRPRIETKDFGSSSFMFEVILTKYGDSESIDQILLLNAVINQGRQLLRLLRDEDGEEQLDEIKAIVHKISAISSNSHCLFPLLKECDGRKKTIEMIKWLGLQSWVLHYRMSEECQTPELWESLFVDNGIGFRKSNEYLLLDHSCSSEDDGFELYNRARAQSKKRKKGGKGRKRRKRNFDSQDSCDDELLDFDIKNDRVDLKLNTGSWLLSTDDYTVPWNAEYDLKLRIRIQDEKIGDAAVESETFWTACSTCRLLHQFEKRYVEHTLVCPSCRKSFKAVDVMCNEPEIREIGVMVGGRRLRNLSSRQNFGSFKGLNVSLNTAQSKRHAAVSKMYGEKKKCLESNGKASSVEGEVRNGDLEEGFDDDDGICGRRLRSGSMRKKMSSVGEVLERSKLKPVKMEEEMTLAELQSQVIQKSRKEKMKLKLKEEEEAEGENKRKKLVEENDNDDERLTLKEIEGLLRIRRQETSKSAGFLENAKQRSSKKNVNLETQKKQGPSCNGVDLDMMVVEDSDFYDFDKDRMERSFKKGQVWAVYDDDDGMPRHYGLIEEVTVNPFEVKMSWLDVQNNGDERLLCWEKMGFHVSCGRFKVTKKTTIHSLNIFSHVVDCERAAKEVHRIYPKKGSVWALYKEEEEGLDAEKRRNLSNKEKRTYDIAVFLTTHSEMHGLSMAYLEKVNGYKTIFKRREIGYHAIRWFEKDDIRLFSHQIPARKLSIDDALGQLKDCWELDPASLPSDLLTTC* 1079
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26036833 26045912 + Chy6G127050.1 Chy06g02177 229886

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02177 1078 Coils Coil 813 833 - -
Chy06g02177 1078 Coils Coil 762 785 - -
Chy06g02177 1078 Pfam Domain of unknown function (DUF3444) 844 1051 IPR024593 -
Chy06g02177 1078 MobiDBLite consensus disorder prediction 497 520 - -
Chy06g02177 1078 MobiDBLite consensus disorder prediction 810 834 - -
Chy06g02177 1078 MobiDBLite consensus disorder prediction 763 784 - -
Chy06g02177 1078 MobiDBLite consensus disorder prediction 497 512 - -
Chy06g02177 1078 PANTHER OS01G0897100 PROTEIN 65 558 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02177 - - - csv:101207675 982.63
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g02177 Chy-Chr6:26036833 Chy07g01503 Chy-Chr7:19312098 8.19E-47 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g740 . . . . . . . . Cmo06g00629 . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi07g01157 . . Cme06g02437 . . . . . . . . . . . Cma06g00621 . Car06g00555 . . . . . . . . . . . . . . . . . . Csa03g00129 Chy06g02177 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004105 5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 2 1 1 1 5 6 0 42