Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02217 ATGGGCATGATGGGTGGACGACAAAGGACCTACACCGCTAATTCCACTGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCTACTGTTTTTAGAGCGATCTATACTCCCTCGAATGAAGTCGTCGCCATCAAGTGTTTGGATCTTGATCGCTGCAATAGTAATCTTGATGATATACGGAGGGAGGCTCAAACGATGAGTTTGATAGATCATCCAAACCTTGTAAGGGCTTATTGTTCATTTGTTGTTGAACGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATGAAGACAGCATACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTATCCTGAAAGAGACTCTTAAAGCTTTGGAGTACCTTCATCGTCAAGGACACATACATCGGGATGTGAAGGCTGGAAACATACTACTTGATAGTAATGGGTCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCCAGAAATACCTTTGTGGGAACTCCATGCTGGATGGCACCAGAGGTATTGCAACCAGGAACGGGATATAATTCCAAGGCTGATATTTGGTCCTTTGGTATTACAGCTTTGGAGTTGGCTCATGGTCATGCGCCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAACGGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAGCCAAGAGGCCAACAGCTGAGAAACTTCTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCAGAGGTTTCTTTGAAGAAACTATTCGCTAATTTGCCTCCTCTTTCACATCGTGTAAAGGACCTGCAGCTTAAAGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAAGAAGCATTGTCACAGAGTGAGTACCAGCGAGGAGTAAGTGCGTGGAACTTTGATGTTGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGATATGGCAGAGATGAAGGAAGAGGAGGAGAATATAAATTCTTGTAGTGTTAAGGATGCCTTCTATCCTCGATCTATTTTGAGGAATTTCAATTCGTGTAATGAATCATCTCAGGATGAACGTGGTGTAGGAGCAAGTGGTCAGGGATTGTCACAAGTAGAGTGCTTGAACAAATGGGGAAACTTTGTGGAAAGTGATGCTCTGAAAGCGGGGTTGCAAGAAAAAATTGGAAAGAGAAATGGAACTAGCACTGAAGCAGAAGCTTCTACCTCTGGCCAAGACATTGTACAAGGCAAGACCAAAACCCAAATGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTTTACCTGGCATTGTGCTCAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTGCTGAAAAAAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTTAGTGGTCCACTAATGCTGCCAAACCGCGCCTCAGCAAACAGCCTATCAGCACCCATAAAACCTTCTGGAGGGTTTAGAGATTCAATGGATGACAAATCCAAAGCTAATCTTGTACAAATTAAGGGGCGTTTTTCAGTGACGTCTGAGAACCTAGATCTTGTAAAGGATATTCCATTGAGCACAGTTTCACGTCGGTCTTCACAGAACTCTCCTCTACGAAAGTCGGCTAGTGTTGGTGATTGGATTTTCGATTCCAAGCAGTCTGTCAGCCAACCCCCTAAGGAGGCTTCCAACACGAACATGCCCACATCAATTCTTCTGCCTCATCTTCAGAATCTTTTCCATCAGACCTCGATTCAACAGGATCTTATCGTGAACTTGTTGAATAGCTTACAAACAGCAGACGTGGTTGATGCTACTCAAAATGGAAAGTTACCTCCATTGCCCCGAAGCTCAGAGAATAATGGAAGTGCTGAAACAGCAGCGGTTGAGAGAGAGCGTTTACTTCTGCGGAAAGTCTCTGAACTTCAAGCTAGAATGATGCATTTGACTTATGAATTGACCGCTGAAAAGTTGAAATACATTCAATTACAAGAGCAGTTCAACTCGGCATCTGGTCAGGAAGAAAATGAGATCAAGAGGGAAGAAAATGTCTAG 2190 43.47 MGMMGGRQRTYTANSTDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAYCSFVVERNLWVVMPFMAEGSCLHLMKTAYSDGFEEVAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGSVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKRFSKSFKEMVAMCLVKDQAKRPTAEKLLKHSFFKNAKPPEVSLKKLFANLPPLSHRVKDLQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNDDMAEMKEEEENINSCSVKDAFYPRSILRNFNSCNESSQDERGVGASGQGLSQVECLNKWGNFVESDALKAGLQEKIGKRNGTSTEAEASTSGQDIVQGKTKTQMPKGRQTQSGPLLPGIVLSHSLSERVRGSERFDSEIQPSAEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQSVSQPPKEASNTNMPTSILLPHLQNLFHQTSIQQDLIVNLLNSLQTADVVDATQNGKLPPLPRSSENNGSAETAAVERERLLLRKVSELQARMMHLTYELTAEKLKYIQLQEQFNSASGQEENEIKREENV* 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26332925 26343049 - Chy6G127450.1 Chy06g02217 229926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02217 729 MobiDBLite consensus disorder prediction 482 520 - -
Chy06g02217 729 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 721 - -
Chy06g02217 729 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g02217 729 CDD STKc_OSR1_SPAK 17 279 - -
Chy06g02217 729 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Chy06g02217 729 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
Chy06g02217 729 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g02217 729 Gene3D Transferase(Phosphotransferase) domain 1 99 330 - -
Chy06g02217 729 SUPERFAMILY Protein kinase-like (PK-like) 17 335 IPR011009 -
Chy06g02217 729 Coils Coil 343 363 - -
Chy06g02217 729 MobiDBLite consensus disorder prediction 482 506 - -
Chy06g02217 729 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g02217 729 MobiDBLite consensus disorder prediction 453 472 - -
Chy06g02217 729 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 721 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g02217 Chy-Chr6:26332925 Chy09g00338 Chy-Chr9:2955913 0 dispersed
Chy06g02217 Chy-Chr6:26332925 Chy06g00495 Chy-Chr6:3358171 8.34E-107 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71351 PF00069 Pkinase 5.20E-61 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02217 - - csv:101213683 1411.74