Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy06g02234 | ATGGCTTCCATTTCTTCTTCTCTTCTTTCTCTCTTCTTCTTCTTCCCTTTCATTTCAGGTGTAAATTCATCAACCTTCACCATTTTAAATCAATGTGATTACACGGTGTGGCCGGGAGTTTTGTCCGGCGCTGGCACATCACAGCTCTCCACCACCGGCTTTGTTCTTGAGAAAGGTCAGTCCAACGCTATCACCATGCCGCCAGGATGGTCCGGCCGCATTTGGGGTCGCACTTATTGTTCCCAAGATGCCACCGGCAGGTTCTCCTGTGCCACTGCCGACTGCGGCTCCGGCATCGTCGAATGCAACGGTGCTGGCGCTACCCCGCCCGCCACCCTTGCTGAGTTCACGCTCAACGGTGCAAGCGGGCTCGATTTCTACGATGTCAGCCTTGTAGATGGCTACAATGTGCCCATGTTAATCACCCCACAAGACGGAACAGGTGGGGGAAATTGCACAACAATTGGATGTGCAACAGATTTAAACAACGAATGTCCGGCAGAACTAAGAGTGGTGGGGAGCGACGGAGGTGGAAGAAGTGTAGCATGTAAAAGCGCATGTGAGGCTTTTGGTGAAGCACAATATTGTTGTAGCGGTGAATATGGAAATCCAAACACTTGTAGACCCTCATCTTATTCACAGTTCTTCAAATCTGCATGTCCACAAGCTTATAGTTATGCCTACGACGACGGTACCAGCACATTCACTTGCACTGCTGCCAATTACCTCATCACCTTTTGTCCTTCTCTTTCCACCAGTTTGAAATCATCAAACGGGCAGTACCCACGGGCAGTGGACATCTCAAGAGCTCACAATTTGGGCAGACCCTCAGCCACCTCAGTCGCCGTTATCTCCACCGTCACCGCAACTCTCAGTCGGCCATTTTTGCATCTCTTTTAA | 900 | 50.33 | MASISSSLLSLFFFFPFISGVNSSTFTILNQCDYTVWPGVLSGAGTSQLSTTGFVLEKGQSNAITMPPGWSGRIWGRTYCSQDATGRFSCATADCGSGIVECNGAGATPPATLAEFTLNGASGLDFYDVSLVDGYNVPMLITPQDGTGGGNCTTIGCATDLNNECPAELRVVGSDGGGRSVACKSACEAFGEAQYCCSGEYGNPNTCRPSSYSQFFKSACPQAYSYAYDDGTSTFTCTAANYLITFCPSLSTSLKSSNGQYPRAVDISRAHNLGRPSATSVAVISTVTATLSRPFLHLF* | 300 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 26443876 | 26446193 | + | Chy6G127620.1 | Chy06g02234 | 229943 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy06g02234 | 299 | CDD | TLP-PA | 25 | 247 | - | - | |
| Chy06g02234 | 299 | PANTHER | OS09G0536300 PROTEIN | 4 | 263 | - | - | |
| Chy06g02234 | 299 | PANTHER | OS03G0233200 PROTEIN | 4 | 263 | IPR001938 | - | |
| Chy06g02234 | 299 | SMART | tha2 | 26 | 248 | IPR001938 | - | |
| Chy06g02234 | 299 | ProSiteProfiles | Thaumatin family profile. | 23 | 248 | IPR001938 | - | |
| Chy06g02234 | 299 | PIRSF | PR5 | 1 | 292 | IPR001938 | - | |
| Chy06g02234 | 299 | ProSitePatterns | Thaumatin family signature. | 86 | 102 | IPR017949 | - | |
| Chy06g02234 | 299 | SUPERFAMILY | Osmotin, thaumatin-like protein | 25 | 249 | IPR037176 | - | |
| Chy06g02234 | 299 | Pfam | Thaumatin family | 30 | 248 | IPR001938 | - | |
| Chy06g02234 | 299 | PRINTS | Pathogenesis-related protein signature | 238 | 247 | IPR001938 | - | |
| Chy06g02234 | 299 | PRINTS | Pathogenesis-related protein signature | 73 | 84 | IPR001938 | - | |
| Chy06g02234 | 299 | PRINTS | Pathogenesis-related protein signature | 125 | 141 | IPR001938 | - | |
| Chy06g02234 | 299 | PRINTS | Pathogenesis-related protein signature | 25 | 37 | IPR001938 | - | |
| Chy06g02234 | 299 | Gene3D | Thaumatin | 24 | 248 | IPR037176 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy02g00566 | Chy-Chr2:3412098 | Chy06g02234 | Chy-Chr6:26443876 | 1.25E-98 | dispersed | |
| Chy02g00567 | Chy-Chr2:3412351 | Chy06g02234 | Chy-Chr6:26443876 | 3.21E-113 | dispersed | |
| Chy04g00408 | Chy-Chr4:3652658 | Chy06g02234 | Chy-Chr6:26443876 | 8.54E-114 | dispersed | |
| Chy06g02234 | Chy-Chr6:26443876 | Chy11g00276 | Chy-Chr11:2543293 | 1.06E-110 | dispersed | |
| Chy09g01194 | Chy-Chr9:14126169 | Chy06g02234 | Chy-Chr6:26443876 | 1.99E-24 | dispersed | |
| Chy11g00272 | Chy-Chr11:2525833 | Chy06g02234 | Chy-Chr6:26443876 | 4.05E-97 | dispersed | |
| Chy06g02234 | Chy-Chr6:26443876 | Chy06g02236 | Chy-Chr6:26453781 | 7.91E-101 | proximal | |
| Chy06g02207 | Chy-Chr6:26259743 | Chy06g02234 | Chy-Chr6:26443876 | 8.32E-162 | transposed | |
| Chy10g00970 | Chy-Chr10:15190106 | Chy06g02234 | Chy-Chr6:26443876 | 1.52E-89 | transposed | |
| Chy02g00565 | Chy-Chr2:3402686 | Chy06g02234 | Chy-Chr6:26443876 | 1.32E-101 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy06g02234 | - | - | csv:101216818 | 577.785 |