Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02254 ATGTTATCAAGCTTGATGAACTTCCTGAGGGCTTGCTGGCAGCCATGTGCCGATGGTCTCTTGCGTCGTGGGGGCAGTGGTTCCGATTCGGTTGGCTGCCAAGATGGGCTACTTTGGTACAAGGACCATGGCCACCACATCAATGGAGAATTTTCAATGGCTGTTGTTCAAGCCAACAATTTACTTGAGGATCAGAGTCAGCTTGAGTCTGGTCCCTTGAGCTTGCTTGAGTCTGGACCCTATGGAACCTTTGTAGGAATATACGATGGCCATGGTGGCCCCGAGACATCGCGATTCATATGTGATAACTTGTTCCAGCATCTAAAAGTGTTTGTCACAGAAGAAAAGGAAATGTCAGTAAATGTGATAAAAAAAGCATTCCAAGCAACAGAAGAGGGTTTTCTCTCTCTTGTCACCAAGCAATGGCCTATGAACCCTCAGATTGCAGCCGTTGGTTCTTGCTGTCTGGTTGCTGTCATTTGTAATAGTAAACTCTACATTGCCAACCTTGGTGATTCCCGGGCTGTGTTAGGAAGGCTTGTTCGGTCCACAGGAGAAGTTTTTCCCATTCAGCTGTCATCAGAGCACAATGTAAGTATACAATCAGTCCGCCAGGAGATGCAGTCTTTGCACCCAGATGACTCCCAGATAGTAGTGCTGAAGCATAATGTATGGCGTGTTAAGGGCTTGATTCAGATTTCTCGGTCAATCGGAGACGTATATCTCAAAAAGCCAGAATTTAACCGGGAACCTTTGTATACTAAGTTTCGCCTCCGAGAACCCTTCAGTAGGCCTATTCTGAGCTCAGATCCAGCAGTTTCTGTGCACGAACTTGATCCAAATGATCAATTTCTTATATTTGCCTCAGATGGGCTGTGGGAGCATCTTAGCAACCAGGATGCAGTTGATATAGTTCACAAGCATCCTCACAGTGGAAGTGCAAGAAGGCTGGTGAAAGCAGCAATGCAGGAAGCAGCTAAGAAACGAGAAATGCGATACTCAGATTTGAAGAAGATTGACCGTGGAGTTCGTCGTCATTTTCACGACGATACAACAGTGATCGTCTTGTTTCTCGGTTCGAGCAGAGGGAGTAATGCTACAGGGGGAGGGAGCCCTGTTTTGTCTGTGAGAGGGGGAGGAGTGAACCTATCTGCAAAATCTCTAGCACCTTGA 1173 46.63 MLSSLMNFLRACWQPCADGLLRRGGSGSDSVGCQDGLLWYKDHGHHINGEFSMAVVQANNLLEDQSQLESGPLSLLESGPYGTFVGIYDGHGGPETSRFICDNLFQHLKVFVTEEKEMSVNVIKKAFQATEEGFLSLVTKQWPMNPQIAAVGSCCLVAVICNSKLYIANLGDSRAVLGRLVRSTGEVFPIQLSSEHNVSIQSVRQEMQSLHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLKKPEFNREPLYTKFRLREPFSRPILSSDPAVSVHELDPNDQFLIFASDGLWEHLSNQDAVDIVHKHPHSGSARRLVKAAMQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVLFLGSSRGSNATGGGSPVLSVRGGGVNLSAKSLAP* 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26572802 26575507 + Chy6G127820.1 Chy06g02254 229963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02254 390 SUPERFAMILY PP2C-like 62 359 IPR036457 -
Chy06g02254 390 SMART PP2C_4 42 356 IPR001932 -
Chy06g02254 390 CDD PP2Cc 82 358 IPR001932 -
Chy06g02254 390 Gene3D - 40 365 IPR036457 -
Chy06g02254 390 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 6 386 - -
Chy06g02254 390 ProSitePatterns PPM-type phosphatase domain signature. 84 92 IPR000222 GO:0043169
Chy06g02254 390 ProSiteProfiles PPM-type phosphatase domain profile. 50 358 IPR001932 -
Chy06g02254 390 Pfam Protein phosphatase 2C 83 327 IPR001932 -
Chy06g02254 390 PANTHER ALPHABET, ISOFORM E-RELATED 6 386 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00665 Chy-Chr1:4773126 Chy06g02254 Chy-Chr6:26572802 0 dispersed
Chy06g02254 Chy-Chr6:26572802 Chy11g00244 Chy-Chr11:2291313 0 dispersed
Chy02g00538 Chy-Chr2:3239014 Chy06g02254 Chy-Chr6:26572802 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02254 K01102 - csv:101220137 761.525