Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g02295 | ATGTCGTCGAAGCATTTTTCGGATTTGGATTCTTCAGCGTCGCCCAATCCGATTCCCACGGATGTAAATCCGGCTCCTTTCGATCATCTACCCTCCACCACCACCTCCTCCACCCTCTCTGCATCTGACGAAAATCCCTGCACATCATCTTCACCTTCTTCCACTCCACCTCCGATTCACTTACCTCTCTCTTGGCCTCCCGATGCCACCCTTTCCCTCCAGTGGATACACCATCTCATTGCCGCCTTCGACTGGTCTTCCAAAAATTTACCTCCATCCCACTTTCCTTCCGTCCTTCCCGTCTCTGTTTTCGACACTCTAATCCTCACCGCTTCTAAAATCCTCCACAAAGAACCCAATTGCCTCAAAATCCTCCAAGATTCACCCCCCAGCAGCGACTCCACTGTAGTCGTCGTCGGAGACATCCACGGTCAATTTCATGATCTCCTCTTTCTGCTGCAGGATGCTGGTTTTCCTTCTGAAAACCGTTTCTTTGTCTTCAATGGGGATTACGTCGACAGAGGGGCTTGGGGTCTTGAAACTTTTTTGCTCTTATTGGCTTGGAAGGTGTTTATGCCACATCGTGTATTTCTTCTTCGTGGAAACCACGAATCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAGGTGCTAGCCAAGTATGGAGACAGAGGTAAGCACGTCTATCGGAAGTGTTTGGGGTGTTTCGAAGGGCTGCCTTTAGCCTCCATTATTGCTGGATGTGTATATACGGCTCATGGAGGACTTTTCCGCAGTATATCAGTTCCTTCGTCTAAAAGATCGAAAGGAAAAAAAAATCGTAGGATAATCTTAAATCCGGAAGCCAACGGGTTATCTCTTGGTTCTTTGGAGGAGCTATCCAAAGCCAGAAGATCTGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCGGGCGATGTGTTGTGGTCTGATCCTTCTATGAATCCTGGTCTCTCCCCAAATAGAGAGAGGGGCATTGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCGATCTGAAGCTAATTATCAGATCCCATGAAGGTCCTGATGCTAGAGAAAAGAGACCCGGTCTTGCAGGAATGGATCAGGGTTACACGATAGATCATGTTGTAGATTCAGGGAAGCTGATTACTTTGTTTAGTGCTCCAGACTATCCACAATTTCAGGCCACTGAGGAAAGATACAAAAACAAAGGTGCATATATTGTTCTAGAACCTCCGAATTTTGATGTTCCAATCATTCATAGTTTTGAAGCCATTACTCCACGACCGAAGGTCAAAGCATATTATGATTTTGAGGATGTAATTGATTCCGACGAAGAATTAGACTTGGCTTCAATGGCAACTGAACAATGA | 1398 | 45.78 | MSSKHFSDLDSSASPNPIPTDVNPAPFDHLPSTTTSSTLSASDENPCTSSSPSSTPPPIHLPLSWPPDATLSLQWIHHLIAAFDWSSKNLPPSHFPSVLPVSVFDTLILTASKILHKEPNCLKILQDSPPSSDSTVVVVGDIHGQFHDLLFLLQDAGFPSENRFFVFNGDYVDRGAWGLETFLLLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLAKYGDRGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSISVPSSKRSKGKKNRRIILNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNRERGIGLLWGPDCTEEFLKKFDLKLIIRSHEGPDAREKRPGLAGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATEERYKNKGAYIVLEPPNFDVPIIHSFEAITPRPKVKAYYDFEDVIDSDEELDLASMATEQ* | 466 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 26838190 | 26854656 | + | Chy6G128230.1 | Chy06g02295 | 230004 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g02295 | 465 | PRINTS | Serine/threonine phosphatase family signature | 165 | 192 | IPR006186 | GO:0016787 | |
Chy06g02295 | 465 | PRINTS | Serine/threonine phosphatase family signature | 135 | 162 | IPR006186 | GO:0016787 | |
Chy06g02295 | 465 | PRINTS | Serine/threonine phosphatase family signature | 198 | 222 | IPR006186 | GO:0016787 | |
Chy06g02295 | 465 | PRINTS | Serine/threonine phosphatase family signature | 295 | 322 | IPR006186 | GO:0016787 | |
Chy06g02295 | 465 | PRINTS | Serine/threonine phosphatase family signature | 389 | 405 | IPR006186 | GO:0016787 | |
Chy06g02295 | 465 | PRINTS | Serine/threonine phosphatase family signature | 235 | 261 | IPR006186 | GO:0016787 | |
Chy06g02295 | 465 | MobiDBLite | consensus disorder prediction | 27 | 50 | - | - | |
Chy06g02295 | 465 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 199 | 204 | IPR006186 | GO:0016787 | |
Chy06g02295 | 465 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 40 | 462 | - | - | |
Chy06g02295 | 465 | SUPERFAMILY | Metallo-dependent phosphatases | 95 | 436 | IPR029052 | - | |
Chy06g02295 | 465 | Pfam | Calcineurin-like phosphoesterase | 135 | 363 | IPR004843 | GO:0016787 | |
Chy06g02295 | 465 | SMART | pp2a_7 | 99 | 435 | IPR006186 | GO:0016787 | |
Chy06g02295 | 465 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 7 | 40 | 462 | - | - | |
Chy06g02295 | 465 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Chy06g02295 | 465 | Gene3D | - | 94 | 454 | IPR029052 | - | |
Chy06g02295 | 465 | MobiDBLite | consensus disorder prediction | 1 | 61 | - | - | |
Chy06g02295 | 465 | CDD | MPP_PP7 | 65 | 445 | IPR041754 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g02295 | Chy-Chr6:26838190 | Chy09g00781 | Chy-Chr9:10464349 | 3.35E-135 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g02295 | K04460 | - | csv:116402529 | 899.042 |