Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02295 ATGTCGTCGAAGCATTTTTCGGATTTGGATTCTTCAGCGTCGCCCAATCCGATTCCCACGGATGTAAATCCGGCTCCTTTCGATCATCTACCCTCCACCACCACCTCCTCCACCCTCTCTGCATCTGACGAAAATCCCTGCACATCATCTTCACCTTCTTCCACTCCACCTCCGATTCACTTACCTCTCTCTTGGCCTCCCGATGCCACCCTTTCCCTCCAGTGGATACACCATCTCATTGCCGCCTTCGACTGGTCTTCCAAAAATTTACCTCCATCCCACTTTCCTTCCGTCCTTCCCGTCTCTGTTTTCGACACTCTAATCCTCACCGCTTCTAAAATCCTCCACAAAGAACCCAATTGCCTCAAAATCCTCCAAGATTCACCCCCCAGCAGCGACTCCACTGTAGTCGTCGTCGGAGACATCCACGGTCAATTTCATGATCTCCTCTTTCTGCTGCAGGATGCTGGTTTTCCTTCTGAAAACCGTTTCTTTGTCTTCAATGGGGATTACGTCGACAGAGGGGCTTGGGGTCTTGAAACTTTTTTGCTCTTATTGGCTTGGAAGGTGTTTATGCCACATCGTGTATTTCTTCTTCGTGGAAACCACGAATCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAGGTGCTAGCCAAGTATGGAGACAGAGGTAAGCACGTCTATCGGAAGTGTTTGGGGTGTTTCGAAGGGCTGCCTTTAGCCTCCATTATTGCTGGATGTGTATATACGGCTCATGGAGGACTTTTCCGCAGTATATCAGTTCCTTCGTCTAAAAGATCGAAAGGAAAAAAAAATCGTAGGATAATCTTAAATCCGGAAGCCAACGGGTTATCTCTTGGTTCTTTGGAGGAGCTATCCAAAGCCAGAAGATCTGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCGGGCGATGTGTTGTGGTCTGATCCTTCTATGAATCCTGGTCTCTCCCCAAATAGAGAGAGGGGCATTGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCGATCTGAAGCTAATTATCAGATCCCATGAAGGTCCTGATGCTAGAGAAAAGAGACCCGGTCTTGCAGGAATGGATCAGGGTTACACGATAGATCATGTTGTAGATTCAGGGAAGCTGATTACTTTGTTTAGTGCTCCAGACTATCCACAATTTCAGGCCACTGAGGAAAGATACAAAAACAAAGGTGCATATATTGTTCTAGAACCTCCGAATTTTGATGTTCCAATCATTCATAGTTTTGAAGCCATTACTCCACGACCGAAGGTCAAAGCATATTATGATTTTGAGGATGTAATTGATTCCGACGAAGAATTAGACTTGGCTTCAATGGCAACTGAACAATGA 1398 45.78 MSSKHFSDLDSSASPNPIPTDVNPAPFDHLPSTTTSSTLSASDENPCTSSSPSSTPPPIHLPLSWPPDATLSLQWIHHLIAAFDWSSKNLPPSHFPSVLPVSVFDTLILTASKILHKEPNCLKILQDSPPSSDSTVVVVGDIHGQFHDLLFLLQDAGFPSENRFFVFNGDYVDRGAWGLETFLLLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLAKYGDRGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSISVPSSKRSKGKKNRRIILNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNRERGIGLLWGPDCTEEFLKKFDLKLIIRSHEGPDAREKRPGLAGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATEERYKNKGAYIVLEPPNFDVPIIHSFEAITPRPKVKAYYDFEDVIDSDEELDLASMATEQ* 466
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 26838190 26854656 + Chy6G128230.1 Chy06g02295 230004
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02295 465 PRINTS Serine/threonine phosphatase family signature 165 192 IPR006186 GO:0016787
Chy06g02295 465 PRINTS Serine/threonine phosphatase family signature 135 162 IPR006186 GO:0016787
Chy06g02295 465 PRINTS Serine/threonine phosphatase family signature 198 222 IPR006186 GO:0016787
Chy06g02295 465 PRINTS Serine/threonine phosphatase family signature 295 322 IPR006186 GO:0016787
Chy06g02295 465 PRINTS Serine/threonine phosphatase family signature 389 405 IPR006186 GO:0016787
Chy06g02295 465 PRINTS Serine/threonine phosphatase family signature 235 261 IPR006186 GO:0016787
Chy06g02295 465 MobiDBLite consensus disorder prediction 27 50 - -
Chy06g02295 465 ProSitePatterns Serine/threonine specific protein phosphatases signature. 199 204 IPR006186 GO:0016787
Chy06g02295 465 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 40 462 - -
Chy06g02295 465 SUPERFAMILY Metallo-dependent phosphatases 95 436 IPR029052 -
Chy06g02295 465 Pfam Calcineurin-like phosphoesterase 135 363 IPR004843 GO:0016787
Chy06g02295 465 SMART pp2a_7 99 435 IPR006186 GO:0016787
Chy06g02295 465 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 40 462 - -
Chy06g02295 465 MobiDBLite consensus disorder prediction 1 18 - -
Chy06g02295 465 Gene3D - 94 454 IPR029052 -
Chy06g02295 465 MobiDBLite consensus disorder prediction 1 61 - -
Chy06g02295 465 CDD MPP_PP7 65 445 IPR041754 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g02295 Chy-Chr6:26838190 Chy09g00781 Chy-Chr9:10464349 3.35E-135 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02295 K04460 - csv:116402529 899.042