Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g02296 | ATGGCGGATGATGCACATAATAGTAGCCCTGGGAATTTGGCTTGGCGATATATATGTCAAAATGCTTGCAGCTATTTTCCTGTTACTCTACATGTTGAGGATATACATGCGTTTGATACCAATCGTGCTTATGTTTTTGGTTATGAGCCACATTCAGTTTTACCTATTGGTGTTGTTGCGTTGGCCGACCTTACTGGTTTCATGCCTCTCAAAAAATTGAAAGTCCTTGCAAGTTCTGCTGTGTTTTATACTCCGTTTTTGAGGCACATATGGACATGGATGGGCCTAACGCCAGCGACAAGGAAAAATTTTATCTCCCTCTTGGCAGCTGGCTATAGTTGCATCATTGTGCCTGGTGGAGTACAAGAGACATTTCATATGGAGCATAATTCGGAGACTGTCTTCCTCAAGACAAGACGAGGATTTGTTCGTATAGCGATGGAGATGGGTACACCACTGGTCCCAGTTTTCTGCTTTGGTCAATCAAGTGTCTATCAATGGTGGAAACCTGGTGGTAAGTTTTTCCTCCATTTTTCAAGAGCAATCAAGTTCACACCAATTGTCTTCTGGGGAGTTTTTGGATCGCCTCTTCCTTATAGGCGGCAGATGCATGTGGTGGTGGGAAGACCCATTGAGGTGAAGAAAAATCCAAATCCAACGAGTGATGAGGTGCTTGATTTACACGGTCGGTTTGTTGAAGCACTCGAAAGTATATTTGAAAGGAAAATGTGCATGCTGTTCCGTTTATTTGATTCGATTGATGCGGGGAGGGCACGAGAAGCGAATCTTAGGGTTAGGATTCTGATTCTTCCGTTGGAACTGAAGATGTGTGACGCGAAGGAGAAACAGGAATCTGTACAAGATGTGTCAACTGCTTTAAGTGAAGGAAACCAAGTTAATGCAAAAGAAGATGAGCTCCATGATTCTCTCTCTGTGCCAGCTAAGGCAACTCAAAACTCTTGCGAAAAAGAGATTGATTCACCTGGAACTTGTGTACAGGAAATTGTACCTCTTGAGGATAATTTAGAAAAACCTACAATTCTTAAGCAATCCAATCCAATTTCTGGGCATTCACTTCCCATGAATTATGACCAAGAGTTGGATAAGCCTGTTGCAGAACCTGCTTCTGATGTCAAGTCTGGCCCTGTTGAGTTACCCCCAAGGGATCTAGATGCTGCTGTTTCCAGCTCTCCCCTAGAAACTGTTCGGTCCTCCATAGATGCCAAATCTGAGGCCTCTGAGATGCCTGAAATTAAAACCTGTTCTCTTGATGATGCTTCAACAGCAAGTCACGATGAACCTGTAACTCCCCATCCAGTGTCATCTTGTGTAAAAGCTGAAACAGAAAATGCCATAGAATTGAAGGTCAATGAAGACATTGTTACTACACCTCATAATGGGGATTCAAACATGAATCACTCGTTTATTTTGGATGAAAATCATATTGCTGAAGGTAGTGAATCAGGAACAGAAGAAGAGCAATCTGCTTTCATGAAGGAGCTTGAGAACTTCTTCAGAGAAAGAAGCTTGGAATTCAAACCTCCTAAGTTCTATGGAGAGGGTCTGAATTGCCTCAAGTTGTGGAGGGCTGTGACTAGATTGGGAGGCTATGACAAGGTGACTTCATGCAAGTTGTGGCGTCAAGTAGGAGAGTCTTTCAAGCCTCCAAAGACATGCACGACAGTTTCATGGACATTTCGTGGATTTTATGAGAAGGCTCTCCTTGATTATGAGAGGCATAAGACCAATGGTGGCGAACTTAGTGTACCTATTGCTTCCAACTCAGAACCGATGAGTATTGAAAACCAGGGATCCGGATCAGGTAGAGCACGAAGAGATGCTGCTGCACGCGCCATGCAAGGTTGGCACTCACAACGTCTTCTGGGAAATGGTGAAGTTAGTGACCCTATTATCAAGGACAAGAACTCACTCTCAATGCAGAAAAGGGAAAAACAACTAAAAAGCATTGGTCTTCTTAAACGTAAGAAACCATCTTACATGGAGCACTCCATGAAATCAGCACGTACAAAATCACCAAAACCACAGTTGGACGTAGCAGTAGTTGATATTGGACAACCAGCCGACTGGGTCAAGGTCAATGTGCAGAAAACTAAAGATTGTTATGAGGTCTATGCATTAGTTCCTGGACTACTCCGCGAGGAGGTGCGTGTTCAGTCTGATCCGGCAGGACGCTTGGTCATTAGTGGTGACCCTGAACATCCTGATAATCCATGGGGTGTCACACCCTTCAAAAAGGTGGTCAGCCTACCGTCAAGGATTGATCCACACCAGACTTCTGCCGTTGTCACCTTACATGGACAGTTGTTTGTTCGTGTTCCATTTGAACAATTGGAATGA | 2358 | 43.85 | MADDAHNSSPGNLAWRYICQNACSYFPVTLHVEDIHAFDTNRAYVFGYEPHSVLPIGVVALADLTGFMPLKKLKVLASSAVFYTPFLRHIWTWMGLTPATRKNFISLLAAGYSCIIVPGGVQETFHMEHNSETVFLKTRRGFVRIAMEMGTPLVPVFCFGQSSVYQWWKPGGKFFLHFSRAIKFTPIVFWGVFGSPLPYRRQMHVVVGRPIEVKKNPNPTSDEVLDLHGRFVEALESIFERKMCMLFRLFDSIDAGRAREANLRVRILILPLELKMCDAKEKQESVQDVSTALSEGNQVNAKEDELHDSLSVPAKATQNSCEKEIDSPGTCVQEIVPLEDNLEKPTILKQSNPISGHSLPMNYDQELDKPVAEPASDVKSGPVELPPRDLDAAVSSSPLETVRSSIDAKSEASEMPEIKTCSLDDASTASHDEPVTPHPVSSCVKAETENAIELKVNEDIVTTPHNGDSNMNHSFILDENHIAEGSESGTEEEQSAFMKELENFFRERSLEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTNGGELSVPIASNSEPMSIENQGSGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSLSMQKREKQLKSIGLLKRKKPSYMEHSMKSARTKSPKPQLDVAVVDIGQPADWVKVNVQKTKDCYEVYALVPGLLREEVRVQSDPAGRLVISGDPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQLE* | 786 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 26855240 | 26869328 | - | Chy6G128240.1 | Chy06g02296 | 230005 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g02296 | 785 | SMART | ARID_2 | 488 | 578 | - | - | |
Chy06g02296 | 785 | CDD | ACD_sHsps-like | 700 | 780 | - | - | |
Chy06g02296 | 785 | MobiDBLite | consensus disorder prediction | 589 | 606 | - | - | |
Chy06g02296 | 785 | PANTHER | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT | 280 | 783 | IPR045147 | GO:0006357 | |
Chy06g02296 | 785 | SMART | bright_3 | 492 | 583 | IPR001606 | GO:0003677 | |
Chy06g02296 | 785 | MobiDBLite | consensus disorder prediction | 369 | 417 | - | - | |
Chy06g02296 | 785 | Pfam | ARID/BRIGHT DNA binding domain | 494 | 578 | IPR001606 | GO:0003677 | |
Chy06g02296 | 785 | PANTHER | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE | 280 | 783 | - | - | |
Chy06g02296 | 785 | SUPERFAMILY | HSP20-like chaperones | 696 | 781 | IPR008978 | - | |
Chy06g02296 | 785 | CDD | LPLAT_MGAT-like | 25 | 241 | - | - | |
Chy06g02296 | 785 | CDD | ARID | 496 | 578 | - | - | |
Chy06g02296 | 785 | Pfam | Diacylglycerol acyltransferase | 16 | 242 | IPR007130 | GO:0008374 | |
Chy06g02296 | 785 | Gene3D | - | 491 | 588 | IPR036431 | GO:0003677 | |
Chy06g02296 | 785 | Gene3D | - | 683 | 785 | IPR008978 | - | |
Chy06g02296 | 785 | MobiDBLite | consensus disorder prediction | 589 | 612 | - | - | |
Chy06g02296 | 785 | ProSiteProfiles | ARID domain profile. | 491 | 582 | IPR001606 | GO:0003677 | |
Chy06g02296 | 785 | Pfam | Hsp20/alpha crystallin family | 702 | 782 | IPR002068 | - | |
Chy06g02296 | 785 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 685 | 785 | IPR002068 | - | |
Chy06g02296 | 785 | SUPERFAMILY | ARID-like | 485 | 592 | IPR036431 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g01573 | Chy-Chr6:17789698 | Chy06g02296 | Chy-Chr6:26855240 | 2.94E-06 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18248 | PF03982 | DAGAT | 4.50E-71 | CL0228 | Chy | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g02296 | - | - | csv:116402528 | 984.556 |