Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02296 ATGGCGGATGATGCACATAATAGTAGCCCTGGGAATTTGGCTTGGCGATATATATGTCAAAATGCTTGCAGCTATTTTCCTGTTACTCTACATGTTGAGGATATACATGCGTTTGATACCAATCGTGCTTATGTTTTTGGTTATGAGCCACATTCAGTTTTACCTATTGGTGTTGTTGCGTTGGCCGACCTTACTGGTTTCATGCCTCTCAAAAAATTGAAAGTCCTTGCAAGTTCTGCTGTGTTTTATACTCCGTTTTTGAGGCACATATGGACATGGATGGGCCTAACGCCAGCGACAAGGAAAAATTTTATCTCCCTCTTGGCAGCTGGCTATAGTTGCATCATTGTGCCTGGTGGAGTACAAGAGACATTTCATATGGAGCATAATTCGGAGACTGTCTTCCTCAAGACAAGACGAGGATTTGTTCGTATAGCGATGGAGATGGGTACACCACTGGTCCCAGTTTTCTGCTTTGGTCAATCAAGTGTCTATCAATGGTGGAAACCTGGTGGTAAGTTTTTCCTCCATTTTTCAAGAGCAATCAAGTTCACACCAATTGTCTTCTGGGGAGTTTTTGGATCGCCTCTTCCTTATAGGCGGCAGATGCATGTGGTGGTGGGAAGACCCATTGAGGTGAAGAAAAATCCAAATCCAACGAGTGATGAGGTGCTTGATTTACACGGTCGGTTTGTTGAAGCACTCGAAAGTATATTTGAAAGGAAAATGTGCATGCTGTTCCGTTTATTTGATTCGATTGATGCGGGGAGGGCACGAGAAGCGAATCTTAGGGTTAGGATTCTGATTCTTCCGTTGGAACTGAAGATGTGTGACGCGAAGGAGAAACAGGAATCTGTACAAGATGTGTCAACTGCTTTAAGTGAAGGAAACCAAGTTAATGCAAAAGAAGATGAGCTCCATGATTCTCTCTCTGTGCCAGCTAAGGCAACTCAAAACTCTTGCGAAAAAGAGATTGATTCACCTGGAACTTGTGTACAGGAAATTGTACCTCTTGAGGATAATTTAGAAAAACCTACAATTCTTAAGCAATCCAATCCAATTTCTGGGCATTCACTTCCCATGAATTATGACCAAGAGTTGGATAAGCCTGTTGCAGAACCTGCTTCTGATGTCAAGTCTGGCCCTGTTGAGTTACCCCCAAGGGATCTAGATGCTGCTGTTTCCAGCTCTCCCCTAGAAACTGTTCGGTCCTCCATAGATGCCAAATCTGAGGCCTCTGAGATGCCTGAAATTAAAACCTGTTCTCTTGATGATGCTTCAACAGCAAGTCACGATGAACCTGTAACTCCCCATCCAGTGTCATCTTGTGTAAAAGCTGAAACAGAAAATGCCATAGAATTGAAGGTCAATGAAGACATTGTTACTACACCTCATAATGGGGATTCAAACATGAATCACTCGTTTATTTTGGATGAAAATCATATTGCTGAAGGTAGTGAATCAGGAACAGAAGAAGAGCAATCTGCTTTCATGAAGGAGCTTGAGAACTTCTTCAGAGAAAGAAGCTTGGAATTCAAACCTCCTAAGTTCTATGGAGAGGGTCTGAATTGCCTCAAGTTGTGGAGGGCTGTGACTAGATTGGGAGGCTATGACAAGGTGACTTCATGCAAGTTGTGGCGTCAAGTAGGAGAGTCTTTCAAGCCTCCAAAGACATGCACGACAGTTTCATGGACATTTCGTGGATTTTATGAGAAGGCTCTCCTTGATTATGAGAGGCATAAGACCAATGGTGGCGAACTTAGTGTACCTATTGCTTCCAACTCAGAACCGATGAGTATTGAAAACCAGGGATCCGGATCAGGTAGAGCACGAAGAGATGCTGCTGCACGCGCCATGCAAGGTTGGCACTCACAACGTCTTCTGGGAAATGGTGAAGTTAGTGACCCTATTATCAAGGACAAGAACTCACTCTCAATGCAGAAAAGGGAAAAACAACTAAAAAGCATTGGTCTTCTTAAACGTAAGAAACCATCTTACATGGAGCACTCCATGAAATCAGCACGTACAAAATCACCAAAACCACAGTTGGACGTAGCAGTAGTTGATATTGGACAACCAGCCGACTGGGTCAAGGTCAATGTGCAGAAAACTAAAGATTGTTATGAGGTCTATGCATTAGTTCCTGGACTACTCCGCGAGGAGGTGCGTGTTCAGTCTGATCCGGCAGGACGCTTGGTCATTAGTGGTGACCCTGAACATCCTGATAATCCATGGGGTGTCACACCCTTCAAAAAGGTGGTCAGCCTACCGTCAAGGATTGATCCACACCAGACTTCTGCCGTTGTCACCTTACATGGACAGTTGTTTGTTCGTGTTCCATTTGAACAATTGGAATGA 2358 43.85 MADDAHNSSPGNLAWRYICQNACSYFPVTLHVEDIHAFDTNRAYVFGYEPHSVLPIGVVALADLTGFMPLKKLKVLASSAVFYTPFLRHIWTWMGLTPATRKNFISLLAAGYSCIIVPGGVQETFHMEHNSETVFLKTRRGFVRIAMEMGTPLVPVFCFGQSSVYQWWKPGGKFFLHFSRAIKFTPIVFWGVFGSPLPYRRQMHVVVGRPIEVKKNPNPTSDEVLDLHGRFVEALESIFERKMCMLFRLFDSIDAGRAREANLRVRILILPLELKMCDAKEKQESVQDVSTALSEGNQVNAKEDELHDSLSVPAKATQNSCEKEIDSPGTCVQEIVPLEDNLEKPTILKQSNPISGHSLPMNYDQELDKPVAEPASDVKSGPVELPPRDLDAAVSSSPLETVRSSIDAKSEASEMPEIKTCSLDDASTASHDEPVTPHPVSSCVKAETENAIELKVNEDIVTTPHNGDSNMNHSFILDENHIAEGSESGTEEEQSAFMKELENFFRERSLEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTNGGELSVPIASNSEPMSIENQGSGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSLSMQKREKQLKSIGLLKRKKPSYMEHSMKSARTKSPKPQLDVAVVDIGQPADWVKVNVQKTKDCYEVYALVPGLLREEVRVQSDPAGRLVISGDPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQLE* 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26855240 26869328 - Chy6G128240.1 Chy06g02296 230005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02296 785 SMART ARID_2 488 578 - -
Chy06g02296 785 CDD ACD_sHsps-like 700 780 - -
Chy06g02296 785 MobiDBLite consensus disorder prediction 589 606 - -
Chy06g02296 785 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 280 783 IPR045147 GO:0006357
Chy06g02296 785 SMART bright_3 492 583 IPR001606 GO:0003677
Chy06g02296 785 MobiDBLite consensus disorder prediction 369 417 - -
Chy06g02296 785 Pfam ARID/BRIGHT DNA binding domain 494 578 IPR001606 GO:0003677
Chy06g02296 785 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE 280 783 - -
Chy06g02296 785 SUPERFAMILY HSP20-like chaperones 696 781 IPR008978 -
Chy06g02296 785 CDD LPLAT_MGAT-like 25 241 - -
Chy06g02296 785 CDD ARID 496 578 - -
Chy06g02296 785 Pfam Diacylglycerol acyltransferase 16 242 IPR007130 GO:0008374
Chy06g02296 785 Gene3D - 491 588 IPR036431 GO:0003677
Chy06g02296 785 Gene3D - 683 785 IPR008978 -
Chy06g02296 785 MobiDBLite consensus disorder prediction 589 612 - -
Chy06g02296 785 ProSiteProfiles ARID domain profile. 491 582 IPR001606 GO:0003677
Chy06g02296 785 Pfam Hsp20/alpha crystallin family 702 782 IPR002068 -
Chy06g02296 785 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 685 785 IPR002068 -
Chy06g02296 785 SUPERFAMILY ARID-like 485 592 IPR036431 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01573 Chy-Chr6:17789698 Chy06g02296 Chy-Chr6:26855240 2.94E-06 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18248 PF03982 DAGAT 4.50E-71 CL0228 Chy TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02296 - - csv:116402528 984.556