Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g02299 ATGCTGCTTCCGGCCAGCTCTCCAGCGGATCTTGTGCAGACAGAGTGCTTGAGCGTACCCTCGTCCCAGTTCTCCAACTCACTCCTCTCCACCATCGATGTTGTACGACAGGTTATGGCCATTTTCTCTCCGTTCAGTAAATTACTGGGAGACTTTCGGCTTTCCACCGCCATTTCCGACTGTCTCGATTTGCTTGACTCCTCTGCTGACCAGTTGAGCTGGTCCCTCTCCGCCACCCAGAATCCCAAGGCTAAAAACCATAGCACAGGGGATCTGAGTTCTGATCTGAAGACATGGCTGAGCGCTGCAGTGGTTAATCCGGAAACATGCATGGATGGGTTTGAGGGCACCAATAGCATTATCAAAGGTCTAGTATCTGGAGGCATTAACCAGTTAACTTCACAGCTCTATGACCTTCTTTCCATGGTGAAATCAATCCCCAATCAACCGAGCGAGTTTCCTTCATGGCTGAAATCTGAGGACCGGAACTTGCTGCAACTAAATGACTTGGCCGCCGATGCCACAGTGGCCGCCGACGGGACTGGGGATTTCACCAATGTGATGGATGCGGTACTAGCAGCCCCTGACAATAGCATACGACGTTATGTCATATACATAAAGAAGGGTGTGTACTTGGAGAACGTGGAGGTCAAGAAGAAGAAGTGGAATCTCATGATGATTGGGGATGGAATAGATGCCACCATCATATCGGGTAACCGGAGTTTTATTGACGGTTGGACAACATTCCGATCAGCGACCTTCGCTGTAAGTGGAAGAGGATTCATAGCGCGAGACATAACATTCGAGAATACTGCAGGAGCAGAGAAACATCAAGCAGTGGCACTTAGATCGGACTCCGATCTGTCGGTGTTTTTTAGATGTCGAATTAGAGGCTATCAAGACACGCTGTATACGCACACCATGCGCCAATTTTACCGCGAGTGCCAAATCAGTGGGACCGTTGATTTTCTTTTCGGCGATGCCACCGTCGTTTTTCAAAACTGCAGCATCCTGGCGAAGAAGGGTCTTCCCAACCAGAAAAACACCATCACTGCTCAGGGCCGGAAAGACCCAAACCAACCCACCGGTTTCTCCATTCAATTCTGCAACATATCTGCGGATTCAGACCTTAAACCCTCGGTTAACACTACTGCTACGTACCTTGGAAGACCATGGAAGGAATATTCCAGAACCGTTATCATGCAGTCATACATCAGCGACGCCATTAGGCCCGAAGGTTGGCTTGAGTGGAACGCCAATTTTGCATTGAATACACTATTCTACGCTGAGTTTATGAATTACGGACCGGGGGCGGGATTGGCCAAGCGTGTCAATTGGCCCGGTTACCACCGACTGAATCAAACCAGTGAAGCTACTAACTTCACCGTGGCTCAGTTCATTGAAGGAAACCTGTGGCTGCCGTCCACGGGTGTCAAATACACTGCAGGACTGGGAGCTAATTAG 1464 49.52 MLLPASSPADLVQTECLSVPSSQFSNSLLSTIDVVRQVMAIFSPFSKLLGDFRLSTAISDCLDLLDSSADQLSWSLSATQNPKAKNHSTGDLSSDLKTWLSAAVVNPETCMDGFEGTNSIIKGLVSGGINQLTSQLYDLLSMVKSIPNQPSEFPSWLKSEDRNLLQLNDLAADATVAADGTGDFTNVMDAVLAAPDNSIRRYVIYIKKGVYLENVEVKKKKWNLMMIGDGIDATIISGNRSFIDGWTTFRSATFAVSGRGFIARDITFENTAGAEKHQAVALRSDSDLSVFFRCRIRGYQDTLYTHTMRQFYRECQISGTVDFLFGDATVVFQNCSILAKKGLPNQKNTITAQGRKDPNQPTGFSIQFCNISADSDLKPSVNTTATYLGRPWKEYSRTVIMQSYISDAIRPEGWLEWNANFALNTLFYAEFMNYGPGAGLAKRVNWPGYHRLNQTSEATNFTVAQFIEGNLWLPSTGVKYTAGLGAN* 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26925991 26927811 - Chy6G128270.1 Chy06g02299 230008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g02299 487 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 146 IPR035513 -
Chy06g02299 487 SUPERFAMILY Pectin lyase-like 171 483 IPR011050 -
Chy06g02299 487 Gene3D Invertase/pectin methylesterase inhibitor family protein 6 149 IPR035513 -
Chy06g02299 487 Pfam Pectinesterase 173 470 IPR000070 GO:0030599|GO:0042545
Chy06g02299 487 Gene3D - 167 484 IPR012334 -
Chy06g02299 487 SMART PMEI_2 7 146 IPR006501 GO:0004857
Chy06g02299 487 Pfam Plant invertase/pectin methylesterase inhibitor 53 139 IPR006501 GO:0004857
Chy06g02299 487 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 150 484 - -
Chy06g02299 487 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 17 145 - -
Chy06g02299 487 PANTHER PECTINESTERASE 150 484 - -
Chy06g02299 487 PANTHER PECTINESTERASE 17 145 - -
Chy06g02299 487 CDD PMEI-like_4 5 147 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g02299 Chy-Chr6:26925991 Chy08g01045 Chy-Chr8:17543352 1.21E-171 dispersed
Chy06g02299 Chy-Chr6:26925991 Chy06g01208 Chy-Chr6:10749051 3.50E-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g02299 K01051 - csv:101207185 932.554