Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00002 ATGGCTCGATTCCTCGCCGTTTTTCTTTTCTTCTCTCTCGCCTACGCCGCTGCTCGGCTGCCGGCCGACGAAGTTGAGGCGTTGAGGGTGATCGGAAAAACGTTGGGGAAGGCAAATTGGAATTTCACGACAGATCCATGCGGCGGTGTGAACGGCGGTTGGGTAACAACTTCTATGGAATTGGGGTTTACTAATAATCTCACATGTAACTGCAGTTTCCAGAATCACAACGTTTGTCACATCACTAAAATACGTCTAAGATCACAGAACCTTCCGGGTACTCTGCCACCACAAATAGCGAAGCTGACTTACTTGGAAGAACTTGATCTTTCCCGCAACTATCTCAGTGGATCAATTCCTCCAGAATGGGGTCTCACAAAGCTTGTCAACCTTTCCCTTCTTGGAAATCAATTGACGGGTCCAATTCCTAAAGAGATTGGAAATATCGGCACTCTTAAAGAGTTGATCCTTGAAGTTAATTATTTTTCTGGAAGTCTACCTCAAGAACTTGGAAAGTTGAAGAGCTTAACAAGATTACTTATTTCCTCAAACAACTTTACTGGGGAGCTCCCATCTTCACTGGGAAAGATAACCACAATGACGGATCTTCGAATTAGTGATAATAACTTCACAGGACCAATACCTAACTTCATGCAGAATTGGCCAAAGCTTATAACACTATCTATTCAGGCAAGTGGGTTGAGTGGACCAATTCCTCCTCTAATTGGACGTTTGACATTATTAGTTGACCTGAGAATCAGTGACTTGAATGGAGGTTCATCGCGATTTCCACTAATTAATACTTTGACGAACTTAAAAACCCTGATATTGAGGAGTTGCAATATAATTGGGATGCTGCCTCCCATGTTTAATGGATTGGATAACGTGAAAACCATAGACTTTAGCTTCAACAAACTTACTGGACCAATACCTCCCGGCTTTGAAGTTTTGAAACGAGTGGATAGAATATATTTAGCTGGAAACATGCTAAGTGGAGCTGTGCCTCGTTGGATGCTGCAGGAGGGAGAAAACATTGATCTCTCTTACAACAAATTTACCGAGACAGATTTTCAGGCCACTGGATGTGAAGCAAGAAGCTTAAACCTGTTCGCGAGCTCTGCACAAGACATTAGTTCTGGAACAGTTTCATGTTTAGCGGGCTCTTGTGATAAAACTTGGTACTCTCTCCAGATCAATTGCGGTGGGAAGGAAGATTTAGTAAACGGAACAGTCAGGTATGATGGAGACACAAACACAGGCAAATCATCATTGTTTTTTCAAGGCGGAGCTAATTGGGGATTTAGCAACACTGGTAGTTTTATGGACGATGATCGCTCAACAGATGACTTTATTGCATTAAGTCCACCTGAACTCCCAATGAAAGGTCTTGAATTGTACACGAGTGCACGGATTTCTCCAATCTCTCTTAGTTATTATGCATATTGCATGGGTAATGGAAAATACACATTAAGCCTCCATTTTGCTGAGATAGAGTTCGGTTATGACAGAACATACAAAAGCCTTGGCAGACGCATATTTGATGTCTACGTTCAGAGAGTGCTGGTGTTGAAGGATTTTAATATTGCAGATGAAGCAGGTGGTGTTGGCAAACCTCTTATAAAGAAATTTCCTGTTTCTATTACTAATGGTACTGTAGAGGTCCGCTTCTTTTGGGCTGGGAAGGGGACAAATTCAATCCCTTCAAGAGGAACTTATGGTCCTCTAATTTCAGCCATTTCTCTTGTACCTGACTTTGATCCACCAACAGAAAATGGAAGTGCCATATCTGCTGGTGTAGTGGTTGGAATTGTGGCTGCTGTGGTCTTTTTTATCATCTTGCTTCTTGGAGTCTTGTGGTGGAGAGGCAGCCGAAGAAAGAAAAGCACACTTGAACAAGAGTTGAAGGACCTCGATCTAGGAACAGGATCATTTTCATTAAGACAAATTAAAGCTTCTACTAACAATTTTGATGTTGCCAATAAGATCGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGCGTTCTTAACGATGGCAGTGTAATCGCAGTGAAGCAACTTTCTTCAAAGTCAAAGCAAGGAAATCGTGAATTTTTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTTTGGATGTTGTATTGAAGGAGATCAACTTTTGCTAATCTACGAGTATCTGGAAAATAATAGCCTTGCTCGTGCCTTATTCGGACCTGAAGAATATCAACTGAAATTGGATTGGCCAACAAGGCAGAAGATTTGTGTTGGTATTGCTAAAGGTTTAGCATATCTTCATGATGAGTCAAGATTAAAGATCGTTCACCGAGATATCAAAGCTACCAATGTTCTTCTCGATAAAAATCTAAACCCTAAGATTTCCGACTTTGGCTTGGCCAGGCTGGATGACGAAGGAAATACACACATCAGCACACGGGTTGCTGGAACCTATGGATACATGGCACCAGAATATGCAATGCGAGGCTACTTAACTGATAAAGCAGATGTTTACAGCTTTGGTGTGGTGGCATTAGAAATCGTGGGTGGTCGAAGCAACACAAGTTTTGGAACCAAGGATGATTGCTTATACCTTCTTGACTAT 2616 41.9 MARFLAVFLFFSLAYAAARLPADEVEALRVIGKTLGKANWNFTTDPCGGVNGGWVTTSMELGFTNNLTCNCSFQNHNVCHITKIRLRSQNLPGTLPPQIAKLTYLEELDLSRNYLSGSIPPEWGLTKLVNLSLLGNQLTGPIPKEIGNIGTLKELILEVNYFSGSLPQELGKLKSLTRLLISSNNFTGELPSSLGKITTMTDLRISDNNFTGPIPNFMQNWPKLITLSIQASGLSGPIPPLIGRLTLLVDLRISDLNGGSSRFPLINTLTNLKTLILRSCNIIGMLPPMFNGLDNVKTIDFSFNKLTGPIPPGFEVLKRVDRIYLAGNMLSGAVPRWMLQEGENIDLSYNKFTETDFQATGCEARSLNLFASSAQDISSGTVSCLAGSCDKTWYSLQINCGGKEDLVNGTVRYDGDTNTGKSSLFFQGGANWGFSNTGSFMDDDRSTDDFIALSPPELPMKGLELYTSARISPISLSYYAYCMGNGKYTLSLHFAEIEFGYDRTYKSLGRRIFDVYVQRVLVLKDFNIADEAGGVGKPLIKKFPVSITNGTVEVRFFWAGKGTNSIPSRGTYGPLISAISLVPDFDPPTENGSAISAGVVVGIVAAVVFFIILLLGVLWWRGSRRKKSTLEQELKDLDLGTGSFSLRQIKASTNNFDVANKIGEGGFGPVYKGVLNDGSVIAVKQLSSKSKQGNREFLNEIGMISALQHPHLVKLFGCCIEGDQLLLIYEYLENNSLARALFGPEEYQLKLDWPTRQKICVGIAKGLAYLHDESRLKIVHRDIKATNVLLDKNLNPKISDFGLARLDDEGNTHISTRVAGTYGYMAPEYAMRGYLTDKADVYSFGVVALEIVGGRSNTSFGTKDDCLYLLDY 872
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 38059 46257 - Chy7G128320.1 Chy07g00002 230013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00002 872 SUPERFAMILY L domain-like 65 336 - -
Chy07g00002 872 Gene3D Ribonuclease Inhibitor 259 362 IPR032675 -
Chy07g00002 872 Gene3D Ribonuclease Inhibitor 190 258 IPR032675 -
Chy07g00002 872 Pfam Protein kinase domain 657 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00002 872 ProSiteProfiles Leucine-rich repeat profile. 104 126 IPR001611 GO:0005515
Chy07g00002 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Chy07g00002 872 SMART serkin_6 656 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00002 872 Gene3D - 393 584 - -
Chy07g00002 872 ProSiteProfiles Protein kinase domain profile. 656 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00002 872 Pfam Malectin domain 395 579 IPR021720 -
Chy07g00002 872 SUPERFAMILY Protein kinase-like (PK-like) 643 862 IPR011009 -
Chy07g00002 872 Gene3D Ribonuclease Inhibitor 37 189 IPR032675 -
Chy07g00002 872 Pfam Leucine rich repeat 270 330 IPR001611 GO:0005515
Chy07g00002 872 Gene3D Phosphorylase Kinase; domain 1 620 731 - -
Chy07g00002 872 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 867 - -
Chy07g00002 872 Gene3D Transferase(Phosphotransferase) domain 1 732 872 - -
Chy07g00002 872 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 71 867 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00002 Chy-Chr7:38059 Chy07g00454 Chy-Chr7:3565487 0 dispersed
Chy07g00002 Chy-Chr7:38059 Chy07g00003 Chy-Chr7:47337 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71355 PF00069 Pkinase 3.10E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00002 - - csv:101221555 1670.6