Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy07g00002 | ATGGCTCGATTCCTCGCCGTTTTTCTTTTCTTCTCTCTCGCCTACGCCGCTGCTCGGCTGCCGGCCGACGAAGTTGAGGCGTTGAGGGTGATCGGAAAAACGTTGGGGAAGGCAAATTGGAATTTCACGACAGATCCATGCGGCGGTGTGAACGGCGGTTGGGTAACAACTTCTATGGAATTGGGGTTTACTAATAATCTCACATGTAACTGCAGTTTCCAGAATCACAACGTTTGTCACATCACTAAAATACGTCTAAGATCACAGAACCTTCCGGGTACTCTGCCACCACAAATAGCGAAGCTGACTTACTTGGAAGAACTTGATCTTTCCCGCAACTATCTCAGTGGATCAATTCCTCCAGAATGGGGTCTCACAAAGCTTGTCAACCTTTCCCTTCTTGGAAATCAATTGACGGGTCCAATTCCTAAAGAGATTGGAAATATCGGCACTCTTAAAGAGTTGATCCTTGAAGTTAATTATTTTTCTGGAAGTCTACCTCAAGAACTTGGAAAGTTGAAGAGCTTAACAAGATTACTTATTTCCTCAAACAACTTTACTGGGGAGCTCCCATCTTCACTGGGAAAGATAACCACAATGACGGATCTTCGAATTAGTGATAATAACTTCACAGGACCAATACCTAACTTCATGCAGAATTGGCCAAAGCTTATAACACTATCTATTCAGGCAAGTGGGTTGAGTGGACCAATTCCTCCTCTAATTGGACGTTTGACATTATTAGTTGACCTGAGAATCAGTGACTTGAATGGAGGTTCATCGCGATTTCCACTAATTAATACTTTGACGAACTTAAAAACCCTGATATTGAGGAGTTGCAATATAATTGGGATGCTGCCTCCCATGTTTAATGGATTGGATAACGTGAAAACCATAGACTTTAGCTTCAACAAACTTACTGGACCAATACCTCCCGGCTTTGAAGTTTTGAAACGAGTGGATAGAATATATTTAGCTGGAAACATGCTAAGTGGAGCTGTGCCTCGTTGGATGCTGCAGGAGGGAGAAAACATTGATCTCTCTTACAACAAATTTACCGAGACAGATTTTCAGGCCACTGGATGTGAAGCAAGAAGCTTAAACCTGTTCGCGAGCTCTGCACAAGACATTAGTTCTGGAACAGTTTCATGTTTAGCGGGCTCTTGTGATAAAACTTGGTACTCTCTCCAGATCAATTGCGGTGGGAAGGAAGATTTAGTAAACGGAACAGTCAGGTATGATGGAGACACAAACACAGGCAAATCATCATTGTTTTTTCAAGGCGGAGCTAATTGGGGATTTAGCAACACTGGTAGTTTTATGGACGATGATCGCTCAACAGATGACTTTATTGCATTAAGTCCACCTGAACTCCCAATGAAAGGTCTTGAATTGTACACGAGTGCACGGATTTCTCCAATCTCTCTTAGTTATTATGCATATTGCATGGGTAATGGAAAATACACATTAAGCCTCCATTTTGCTGAGATAGAGTTCGGTTATGACAGAACATACAAAAGCCTTGGCAGACGCATATTTGATGTCTACGTTCAGAGAGTGCTGGTGTTGAAGGATTTTAATATTGCAGATGAAGCAGGTGGTGTTGGCAAACCTCTTATAAAGAAATTTCCTGTTTCTATTACTAATGGTACTGTAGAGGTCCGCTTCTTTTGGGCTGGGAAGGGGACAAATTCAATCCCTTCAAGAGGAACTTATGGTCCTCTAATTTCAGCCATTTCTCTTGTACCTGACTTTGATCCACCAACAGAAAATGGAAGTGCCATATCTGCTGGTGTAGTGGTTGGAATTGTGGCTGCTGTGGTCTTTTTTATCATCTTGCTTCTTGGAGTCTTGTGGTGGAGAGGCAGCCGAAGAAAGAAAAGCACACTTGAACAAGAGTTGAAGGACCTCGATCTAGGAACAGGATCATTTTCATTAAGACAAATTAAAGCTTCTACTAACAATTTTGATGTTGCCAATAAGATCGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGCGTTCTTAACGATGGCAGTGTAATCGCAGTGAAGCAACTTTCTTCAAAGTCAAAGCAAGGAAATCGTGAATTTTTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTTTGGATGTTGTATTGAAGGAGATCAACTTTTGCTAATCTACGAGTATCTGGAAAATAATAGCCTTGCTCGTGCCTTATTCGGACCTGAAGAATATCAACTGAAATTGGATTGGCCAACAAGGCAGAAGATTTGTGTTGGTATTGCTAAAGGTTTAGCATATCTTCATGATGAGTCAAGATTAAAGATCGTTCACCGAGATATCAAAGCTACCAATGTTCTTCTCGATAAAAATCTAAACCCTAAGATTTCCGACTTTGGCTTGGCCAGGCTGGATGACGAAGGAAATACACACATCAGCACACGGGTTGCTGGAACCTATGGATACATGGCACCAGAATATGCAATGCGAGGCTACTTAACTGATAAAGCAGATGTTTACAGCTTTGGTGTGGTGGCATTAGAAATCGTGGGTGGTCGAAGCAACACAAGTTTTGGAACCAAGGATGATTGCTTATACCTTCTTGACTAT | 2616 | 41.9 | MARFLAVFLFFSLAYAAARLPADEVEALRVIGKTLGKANWNFTTDPCGGVNGGWVTTSMELGFTNNLTCNCSFQNHNVCHITKIRLRSQNLPGTLPPQIAKLTYLEELDLSRNYLSGSIPPEWGLTKLVNLSLLGNQLTGPIPKEIGNIGTLKELILEVNYFSGSLPQELGKLKSLTRLLISSNNFTGELPSSLGKITTMTDLRISDNNFTGPIPNFMQNWPKLITLSIQASGLSGPIPPLIGRLTLLVDLRISDLNGGSSRFPLINTLTNLKTLILRSCNIIGMLPPMFNGLDNVKTIDFSFNKLTGPIPPGFEVLKRVDRIYLAGNMLSGAVPRWMLQEGENIDLSYNKFTETDFQATGCEARSLNLFASSAQDISSGTVSCLAGSCDKTWYSLQINCGGKEDLVNGTVRYDGDTNTGKSSLFFQGGANWGFSNTGSFMDDDRSTDDFIALSPPELPMKGLELYTSARISPISLSYYAYCMGNGKYTLSLHFAEIEFGYDRTYKSLGRRIFDVYVQRVLVLKDFNIADEAGGVGKPLIKKFPVSITNGTVEVRFFWAGKGTNSIPSRGTYGPLISAISLVPDFDPPTENGSAISAGVVVGIVAAVVFFIILLLGVLWWRGSRRKKSTLEQELKDLDLGTGSFSLRQIKASTNNFDVANKIGEGGFGPVYKGVLNDGSVIAVKQLSSKSKQGNREFLNEIGMISALQHPHLVKLFGCCIEGDQLLLIYEYLENNSLARALFGPEEYQLKLDWPTRQKICVGIAKGLAYLHDESRLKIVHRDIKATNVLLDKNLNPKISDFGLARLDDEGNTHISTRVAGTYGYMAPEYAMRGYLTDKADVYSFGVVALEIVGGRSNTSFGTKDDCLYLLDY | 872 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 38059 | 46257 | - | Chy7G128320.1 | Chy07g00002 | 230013 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy07g00002 | 872 | SUPERFAMILY | L domain-like | 65 | 336 | - | - | |
Chy07g00002 | 872 | Gene3D | Ribonuclease Inhibitor | 259 | 362 | IPR032675 | - | |
Chy07g00002 | 872 | Gene3D | Ribonuclease Inhibitor | 190 | 258 | IPR032675 | - | |
Chy07g00002 | 872 | Pfam | Protein kinase domain | 657 | 856 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy07g00002 | 872 | ProSiteProfiles | Leucine-rich repeat profile. | 104 | 126 | IPR001611 | GO:0005515 | |
Chy07g00002 | 872 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 778 | 790 | IPR008271 | GO:0004672|GO:0006468 | |
Chy07g00002 | 872 | SMART | serkin_6 | 656 | 869 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy07g00002 | 872 | Gene3D | - | 393 | 584 | - | - | |
Chy07g00002 | 872 | ProSiteProfiles | Protein kinase domain profile. | 656 | 872 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy07g00002 | 872 | Pfam | Malectin domain | 395 | 579 | IPR021720 | - | |
Chy07g00002 | 872 | SUPERFAMILY | Protein kinase-like (PK-like) | 643 | 862 | IPR011009 | - | |
Chy07g00002 | 872 | Gene3D | Ribonuclease Inhibitor | 37 | 189 | IPR032675 | - | |
Chy07g00002 | 872 | Pfam | Leucine rich repeat | 270 | 330 | IPR001611 | GO:0005515 | |
Chy07g00002 | 872 | Gene3D | Phosphorylase Kinase; domain 1 | 620 | 731 | - | - | |
Chy07g00002 | 872 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 71 | 867 | - | - | |
Chy07g00002 | 872 | Gene3D | Transferase(Phosphotransferase) domain 1 | 732 | 872 | - | - | |
Chy07g00002 | 872 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 71 | 867 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy07g00002 | Chy-Chr7:38059 | Chy07g00454 | Chy-Chr7:3565487 | 0 | dispersed | |
Chy07g00002 | Chy-Chr7:38059 | Chy07g00003 | Chy-Chr7:47337 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71355 | PF00069 | Pkinase | 3.10E-45 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy07g00002 | - | - | csv:101221555 | 1670.6 |