Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00004 ATGGTTCGAACTTGGGACATGGATTTTTCTGTTTGGAATTTTTTTAAAAATGTTCGTGTTCTTGTTTTGGGAGTTCTTGTTTTGAACTGCTTCTTCAGATTTGGATCCGATGCACAACCTTTGCCTGAACAAGAAGTGAGAGCTCTTCAAGCAATATCTACACAACTAAGGAACTTAAACTGGAATGTTAACCAAAATTCTTGCATTAATGGTGATGGGTTTTTCAATAGAGCTTTCCTTGGTACTGATATTATCAGAGAGGTTAATTGCACTTGCACCACCACTGTTTGCAGAGTCACTAGCATCCGGCTAAAGGGTCTGAATCTAACTGGAACTCTGCCAGCAGCATTTGCAAATCTGACTCAGCTCCAAAAAATTGATCTTACTCGAAACTTAATTTCTGGATCAATCCCTAAAGAGTTTGCTCAAATTCCTCTTGTTGATCTGTCCATGTTGGGAAATCGTCTTAGTGGCCCTATTCCTCAAGAAATTGGTGACATTGCTACACTTGAGCATCTGGTTTTGGAAGACAATCTCCTTACAGGGAATCTTCCCGAGAGCCTCGGGCGACTGAGCCGCTTGCAAAGATTACTTCTTTCTGTAAACAATTTCAATGGAACAATTCCAAGATCTTATGGAAACTTGAAGAACTTGACTGATTTTCGGATAGATGGAAATGATGTATCAGGAAGGCTTCCTGAATTTATTGGCAATTGGACTAAACTTGAGAGATTGGATATTCAAGGAACTTCAATGGAGACCCCTATTCCTAGAGGCATATCTGACTTGAAAAACTTAACCGAATTGAGGATAACTGATTTGAAGGGACTCCCAACAAGTTTTCCCAATTTGACTCAATTGACATCTTTAAAAGAACTGGTTCTAAGAAATTGCTTAATTCGGGATCGGATTCCTGAATACATTGGACTGTTTAGTAGTTTAAAAACTTTAGATCTAAGCTTCAATGAGTTGAGTGGTCCAATTCCAGATACATTTCAAAATCTAGAGAGAGTTACTCAATTCTTGTTTTTGACCAACAACTCATTAAGTGGCCAAGTACCAAGCTGGATCTTGAACAGTGAAAGGAGCATAGATTTATCTTACAACAATTTTACAGGGTCCCCTGTTTCAAGTTGTCAACAATCTGATGTGAACTTGGTTTCAAGTTATTCAACTACAATGAATGAAACTGTTTCTTGGTGCTTGAGAAAGGATCTCCCTTGCCCAAGAGAAAACCGATTTCATTCCTTGTTCATAAATTGTGGAGGACAAAGGATGGAGGTTGATGGTAATGATTATGAAGAGGATGTAACTCCAGGTGGAAAGTCCAATTTCCTTTCTTTCTCTGACAGATGGGCTTATAGCAGTACTGGTGTTTTCTTGGGAGATGAGAATGCTAATTACAGAGCAACAAGTACCAATTCATCAATCCCGAACATCTACCAAACCGCTCGACTCGCACCTCTTTCGCTCAAGTACTATGGACTTTGCTTAAGAAGAGGAAGTTACAATGTGAAGCTTCACTTTGCTGAAATAATGTATACATCTGATCAAACATTTAGCAGCTTGGGAGAGCGCATATTTGATATCTCAATTCAAGGAAAATTGGTTCAAAAAGATTTTAACATAATGGAGAAAGCTGGTGGTGTTGGGAAAACCTTTATTCTAGAAGAGTCTAATATTTTGGTAAATGGAAGTACTCTTGAGATTCATTTATATTGGGCTGGGAAAGGAACTACTGCTATTCCAGACAGAGGGGTGTATGGACCTTTGATATCTGGCATTACAGTCACACCAAACTTTGATGTGGAGCCTGGAACGCTATCAGCTGGAGCTATCGCTGGGATTGTTGTTGGTAGTTTTGTGTTTGTTGTGTTGGTTTTGGCTGTTCTTAGATGGAAAGGTTTTTTGGGTGGAAAGGAGACTGAAGACAGTGAGTTGAAGGCCCTAGATTTACAGACAGGTTATTTCAGTTTGAGACAAATCAAAACAGCCACTAACAACTTCGACCAGACGTATAAGATAGGCGAGGGAGGTTTTGGTCCTGTCTACAAGGGTGTACTTTCGGATGGTACTTCGATTGCAGTAAAGCAACTATCCGCTAAATCAAGACAGGGAAACCGTGAATTCGTCACTGAGATCGGCATGATATCTGCATTACAACATCCAAATCTTGTTAAGCTTTATGGTTGTTGTATAGAAGGAAACCAGTTATTGCTGGTTTATGAGTATCTAGAGAATAATAGTCTTGCTCGTGCTCTTTTCGGCGCCGAGGAGCACCGACTACACTTGGATTGGCCGATACGGATGAAGATATGCTTGGGAATAGCTAAGGGATTGGCTTACCTTCATGAAGAATCTGTCTTGAAAATTGTTCATAGAGATATTAAAGCTACCAATGTGCTACTCGATAAAAATTTGAACGCCAAGATTTCTGACTTTGGATTGGCCAGACTTGATGAAGAGGAGAACACTCATATCAGCACAAGAATTGCTGGCACAATAGGTTACATGGCTCCTGAGTACGCAATGCGAGGCTACTTAACTGATAAAGCAGATGTTTATAGTTTCGGAGTGGTGGCTTTGGAGATTGTTAGTGGAAAAAGTAACACAAACTACCGACCAAAAGAAGAATTTGTTTATCTTCTCGACTGGGCCTATGTTCTACAAGAGCAAGGAAACCTTCTCGAACTTGTTGATCCGAATCTCGACTCAAATTACCCGAAAGAAGAGGTGATGCGGATGATTAATATAGCTCTGTTATGCACAAATCCATCTCCAACTCTTAGGCCATCAATGTCTTCAGTGGTTAGTATGCTTGAAGGCAAAATTGCAGTCCAAGCACCTATCATAAAGCGAGACACAGTCGATCAAGAAGCGCGGTTCAAAGCGTTTGAAAGGCTGTCACACGATAGCATAACAAGCATTTCAACATCATCACAAGGGATTCCAATGCAAAAAAGTATGTTGCTTGATGGACCATGGGCTGATTCCACTACTTCTACTCAAAACAAGGATGAAACTGAACATTTTTCTTCAACCAGAAACCTCCTTTAA 3057 40.04 MVRTWDMDFSVWNFFKNVRVLVLGVLVLNCFFRFGSDAQPLPEQEVRALQAISTQLRNLNWNVNQNSCINGDGFFNRAFLGTDIIREVNCTCTTTVCRVTSIRLKGLNLTGTLPAAFANLTQLQKIDLTRNLISGSIPKEFAQIPLVDLSMLGNRLSGPIPQEIGDIATLEHLVLEDNLLTGNLPESLGRLSRLQRLLLSVNNFNGTIPRSYGNLKNLTDFRIDGNDVSGRLPEFIGNWTKLERLDIQGTSMETPIPRGISDLKNLTELRITDLKGLPTSFPNLTQLTSLKELVLRNCLIRDRIPEYIGLFSSLKTLDLSFNELSGPIPDTFQNLERVTQFLFLTNNSLSGQVPSWILNSERSIDLSYNNFTGSPVSSCQQSDVNLVSSYSTTMNETVSWCLRKDLPCPRENRFHSLFINCGGQRMEVDGNDYEEDVTPGGKSNFLSFSDRWAYSSTGVFLGDENANYRATSTNSSIPNIYQTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTSDQTFSSLGERIFDISIQGKLVQKDFNIMEKAGGVGKTFILEESNILVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISGITVTPNFDVEPGTLSAGAIAGIVVGSFVFVVLVLAVLRWKGFLGGKETEDSELKALDLQTGYFSLRQIKTATNNFDQTYKIGEGGFGPVYKGVLSDGTSIAVKQLSAKSRQGNREFVTEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYLENNSLARALFGAEEHRLHLDWPIRMKICLGIAKGLAYLHEESVLKIVHRDIKATNVLLDKNLNAKISDFGLARLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPNLDSNYPKEEVMRMINIALLCTNPSPTLRPSMSSVVSMLEGKIAVQAPIIKRDTVDQEARFKAFERLSHDSITSISTSSQGIPMQKSMLLDGPWADSTTSTQNKDETEHFSSTRNLL* 1019
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 79581 88862 + Chy7G128340.1 Chy07g00004 230015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00004 1018 Gene3D Phosphorylase Kinase; domain 1 638 744 - -
Chy07g00004 1018 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 304 359 - -
Chy07g00004 1018 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 388 1003 - -
Chy07g00004 1018 Gene3D Ribonuclease Inhibitor 275 400 IPR032675 -
Chy07g00004 1018 SMART serkin_6 669 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00004 1018 CDD STKc_IRAK 675 942 - -
Chy07g00004 1018 Gene3D - 415 600 - -
Chy07g00004 1018 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 302 - -
Chy07g00004 1018 PANTHER - 304 359 - -
Chy07g00004 1018 PANTHER - 388 1003 - -
Chy07g00004 1018 Pfam Protein tyrosine and serine/threonine kinase 673 940 IPR001245 GO:0004672|GO:0006468
Chy07g00004 1018 Gene3D Transferase(Phosphotransferase) domain 1 745 961 - -
Chy07g00004 1018 SUPERFAMILY Protein kinase-like (PK-like) 653 951 IPR011009 -
Chy07g00004 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Chy07g00004 1018 MobiDBLite consensus disorder prediction 990 1018 - -
Chy07g00004 1018 Gene3D Ribonuclease Inhibitor 52 274 IPR032675 -
Chy07g00004 1018 SUPERFAMILY L domain-like 90 373 - -
Chy07g00004 1018 ProSiteProfiles Protein kinase domain profile. 669 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00004 1018 MobiDBLite consensus disorder prediction 993 1018 - -
Chy07g00004 1018 Pfam Malectin domain 417 595 IPR021720 -
Chy07g00004 1018 PANTHER - 77 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00004 Chy-Chr7:79581 Chy07g00970 Chy-Chr7:14325037 0 dispersed
Chy07g00004 Chy-Chr7:79581 Chy07g00006 Chy-Chr7:96239 2.93E-65 proximal
Chy07g00003 Chy-Chr7:47337 Chy07g00004 Chy-Chr7:79581 0 tandem
Chy07g00004 Chy-Chr7:79581 Chy07g00005 Chy-Chr7:95537 1.90E-55 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71357 PF07714 PK_Tyr_Ser-Thr 2.50E-51 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00004 - - csv:101222014 1933.69