Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00059 ATGTCTGATGTGGCGAGTATAGCAGAGGCAGTGGCAGCAAGATTTAGTTCTTTGGAGCTTATTGGCAGAGGATCTTTTGGTGATGTCTACAAGGGGTTTGACAAGGAACTTAACAAAGAAGTTGCTATCAAAGTTATTGATTTGGAAGAATCTGAGGATGAAATTGAGGATATTCAAAAGGAAATTTCTGTTTTGTCACAATGTCGATCACCCTACATTACTGAGTACTATGGTTCTTATCTCCACCAGACGAAATTATGGATAATAATGGAATATATGGCTGGTGGCTCTGTTGCAGATCTGCTTCAGTCTGGGCCACCGCTGGATGAAATGTCAATTTCATGCATTCTACGGGATTTGCTGCATGCAATTGATTATTTGCACACGGAAGGAAAAATCCACAGGGACATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTCAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACAATATCAAGGAGAAAGACATTCGTAGGAACTCCATTCTGGATGGCGCCAGAGGTAATTCAGAACTCTGAAGGATACAATGAGAAGGCAGACATCTGGTCTCTAGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGGGAAAATCCACCTCAGTTGGATGAACATTTTTCTCGGCCAATGAAAGAATTAGTGTCACTGTGTCTGAAGAAAATACCTGCTGAGAGACCCAGTGCCAAAGAGCTTCTGAAGCACCGATTCATTAAGAATGCCAGGAAGAGTCCTAGGCTTCTGGAGAGAATAAGAGAGCGCCCAAAGTACCAAATAAAGGAAGAAGATGCAGAAACACCAACAAATGGTTCTAGAGCGATAGGTGAAACCACAGACACTGTGAAAGTATCAAGAAATGTGAAGGAGGAAACTGTTCGTGCCAGCAACCAGAGTAAAGCTCCAAAGAATGCTGGATGGGACTTCAGTATTGGGGGACCACATAGTACAGGTACTGTTCGAAGTGGAGTAAAACCACCTCAAATTAGGGAAAGAAAACCAGAAATTCCTTATGGTCAGGTTGCACCTAGTAGAGTTGCAGAGAGTGGTAACTGGCTAGCTATGTCTGGATATGCATCACGTGACACATCAGAAAACACCAGAGATTCATACAGTATGGGAGATGCTAGTGAAGATGAAGAGCTATCTGTAAGTGGTTCAGGAACCGTTGTGATCCGGTCTCCCAGGGGATCTCAAGCATCTACTCAATTTCATAATGAAAGCAGTCCGTCTGAAAGTGCACAAGGATATTTTGAGAACACATCTTTTAGTGGTACTGTTGTTATGCGTGGTCAACGTGATGATTCTGGTTCTCCTCAGACTCCAAAATCCAGAATGGGAATTCAAGAAAGGACTTCAAGCTTTTCTCCCGAAGATAGTGCATCAAACCTTGCGGAGGCAAAGGCTGCAATACAAGCAGGATTGAAGAAAGCTAATGCAAGGGATAGATCAGCTATCAATAAACTCAACGACAGGAAGGAAAATAGAAGAACAGAGCAAATAGTGAGTAGCTCTGACTCTTCAAGGCATTCTCGTGAATTCTTTGATGCGCCAAGAGCATCGGTAAAACCATCTCTATCACTTGATGAGGAAGAAAGTGCAAAAATAGCATCATCTTCTGCACCATTATCGGTTTTATTTATGTCATCCTTGAAAGAGGTAGTTGCAGATGATTCGGAAGGATCACCTTCTCGTACTGTAATTAATGCACTTATAAACATGGAACACCTAAAACCTGGATCATGTGAGGTTCTTGCCACTAAGTTGCTCCAGAAATTGGCCAGTTCCAAGGAATCTTCACTGAAAGATTTACAAGACTTGGCTACTCGCTTATTCATTAAGGCAAAGACAGTTCCTGAAGATACACAAAATGTCACAGATTCTGATAATAGCAAAAAGCTACCGAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTGTCAAGATGGCAAGGTCAGGTGTCAAGGGATCTGAGTCCAGCTTAG 2088 42.05 MSDVASIAEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEMSISCILRDLLHAIDYLHTEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKELVSLCLKKIPAERPSAKELLKHRFIKNARKSPRLLERIRERPKYQIKEEDAETPTNGSRAIGETTDTVKVSRNVKEETVRASNQSKAPKNAGWDFSIGGPHSTGTVRSGVKPPQIRERKPEIPYGQVAPSRVAESGNWLAMSGYASRDTSENTRDSYSMGDASEDEELSVSGSGTVVIRSPRGSQASTQFHNESSPSESAQGYFENTSFSGTVVMRGQRDDSGSPQTPKSRMGIQERTSSFSPEDSASNLAEAKAAIQAGLKKANARDRSAINKLNDRKENRRTEQIVSSSDSSRHSREFFDAPRASVKPSLSLDEEESAKIASSSAPLSVLFMSSLKEVVADDSEGSPSRTVINALINMEHLKPGSCEVLATKLLQKLASSKESSLKDLQDLATRLFIKAKTVPEDTQNVTDSDNSKKLPNRELHSNSNLSSLARFLLSRWQGQVSRDLSPA* 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 518162 531557 - Chy7G128890.1 Chy07g00059 230070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00059 695 MobiDBLite consensus disorder prediction 648 669 - -
Chy07g00059 695 MobiDBLite consensus disorder prediction 509 528 - -
Chy07g00059 695 MobiDBLite consensus disorder prediction 410 489 - -
Chy07g00059 695 CDD STKc_MST3_like 14 287 - -
Chy07g00059 695 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00059 695 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Chy07g00059 695 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 693 - -
Chy07g00059 695 SUPERFAMILY Protein kinase-like (PK-like) 13 302 IPR011009 -
Chy07g00059 695 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00059 695 MobiDBLite consensus disorder prediction 318 370 - -
Chy07g00059 695 Gene3D Transferase(Phosphotransferase) domain 1 12 303 - -
Chy07g00059 695 MobiDBLite consensus disorder prediction 503 543 - -
Chy07g00059 695 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g00059 695 MobiDBLite consensus disorder prediction 386 491 - -
Chy07g00059 695 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 693 - -
Chy07g00059 695 Coils Coil 41 68 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01452 Chy-Chr5:18365650 Chy07g00059 Chy-Chr7:518162 3.22E-44 dispersed
Chy06g00495 Chy-Chr6:3358171 Chy07g00059 Chy-Chr7:518162 1.05E-57 dispersed
Chy07g00059 Chy-Chr7:518162 Chy09g00338 Chy-Chr9:2955913 3.02E-70 dispersed
Chy09g00569 Chy-Chr9:6250326 Chy07g00059 Chy-Chr7:518162 1.12E-45 dispersed
Chy07g00059 Chy-Chr7:518162 Chy09g01038 Chy-Chr9:12879506 2.66E-62 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71360 PF00069 Pkinase 5.10E-68 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00059 K08838 - csv:101214412 1314.67