Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00063 ATGGCTGGAAAAGAGATTCTTCACAAGATGAAGGAAAAAGTTGGGCTGTGGTCGTCCGATCCAGACTCGGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGCTTTCACCTGGTGGAAGGGAAATCAAATCATGCCATGGAAGATTATTTCGTTGCAGAGTTTAAGCAAGTTGATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATTCTATTCCTGATTATTTACGGTCCCACTTATTTTCTAATATAATAAATGAGCCCGATTTCTGGACCGATCCAAAGAATGCTGTCAAGAAAGCATACGAGCAAACTGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGAGGTTCAACCGCTGTCACAGCCATATTGATTGACTGTAAGACACTAATAGTGGGCAATGTGGGGGACTCCCGTGCCGTTATCTGTAGTAAAGGGGAGGCCAAACAATTATCAATTGATCATGAGCCGAGCGTTGAAAGAAAAAGCATCGAGGAGAGAGGTGGTTTTGTATCAAACTTCCCTGTCCGACATCCATTTCAATTACAACATCCATATTCTGAACATCCAGGAGATGTTCCACGCGTTGATGGGCAGTTGGCGGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCTTATGTGGTAGAGGAGACAATAGATGACGATACCGAATTTGTTATCTTAGCAAGCGATGGATTGTGGAAGGTCATGTCAAACGAAGAAGCCGTGGAGTCAATCAAGCATATAAAAGACGCCCATGCAGCTGCCAAACACCTGACAGAGGAAGCCCTCAAGAGGAAGAGCAAAGATGATATCTCTTGTATAGTTGTGAGATTTCACTGA 897 43.26 MAGKEILHKMKEKVGLWSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYFVAEFKQVDHHELGLFAIFDGHLSNSIPDYLRSHLFSNIINEPDFWTDPKNAVKKAYEQTDAYILEKAVDFSHGGSTAVTAILIDCKTLIVGNVGDSRAVICSKGEAKQLSIDHEPSVERKSIEERGGFVSNFPVRHPFQLQHPYSEHPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVEETIDDDTEFVILASDGLWKVMSNEEAVESIKHIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH* 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 582051 584185 + Chy7G128930.1 Chy07g00063 230074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00063 298 SUPERFAMILY PP2C-like 31 298 IPR036457 -
Chy07g00063 298 PANTHER PROTEIN PHOSPHATASE 2C 1 297 IPR015655 GO:0004722|GO:0006470
Chy07g00063 298 CDD PP2Cc 43 297 IPR001932 -
Chy07g00063 298 SMART PP2C_4 31 295 IPR001932 -
Chy07g00063 298 ProSiteProfiles PPM-type phosphatase domain profile. 35 297 IPR001932 -
Chy07g00063 298 Pfam Protein phosphatase 2C 47 290 IPR001932 -
Chy07g00063 298 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 297 - -
Chy07g00063 298 Gene3D - 16 298 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00318 Chy-Chr1:2287841 Chy07g00063 Chy-Chr7:582051 7.08E-125 dispersed
Chy02g00083 Chy-Chr2:534855 Chy07g00063 Chy-Chr7:582051 2.68E-100 dispersed
Chy07g00063 Chy-Chr7:582051 Chy07g00835 Chy-Chr7:10720972 2.13E-108 dispersed
Chy07g00063 Chy-Chr7:582051 Chy04g00256 Chy-Chr4:2272719 8.74E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00063 K17506 - csv:101215129 529.635