Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00121 ATGTCCACGAGGAGTGAACATCATACAGTCCCGCTTTCCGTGCTCCTGAAGCGTGAATTGGCGATTGAGAAGGTTGAGAGACCGGAAATCGTACATGGTCAGGCGAGTCAGAGTAAGAAAGGGGAGGATTTTACACTACTAAAGACTGAATGCGAGAGAGTGGTCGGAGATGGAGTTTCAACCTATTCGGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCAGCTGCTATTTATGCTAAGGAGAATTTATTGAACAATGTTTTAGCTGCTATTCCATCAGATCTCAACCGAGACGAATGGGTTGCAGCATTGCCAAGGGCCTTGGTTGCAGGTTTTGTGAAGACAGACAAAGATTTTCAAGCAAAAGCACAAACATCAGGAACCACAGTCACCTTCATGATCATTGAGGGATGGGTTCTCACTGTTGCCTCTGTTGGTGATTCCCGTTGCACTTTAGAATCATCTGAAGGTGGCATATACTACTTATCTGCAGATCATAGACTAGAAAGCAACGAAGAAGAGAGAGAACGTATAATTGCTAGTGGTGGTGAGGTGGGTCGGCTGAATACCGGTGGCGGTGCAGAGATTGGTCCGTTGAGATGCTGGCCTGGTGGCTTGTGTCTATCACGATCAATTGGTGATATGGATGTTGGCGAGTTTATAGTGCCTGTTCCCCACGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATTATTTCAAGTGATGGTGTTTGGGATGCTTTATCAGCTGAAACGGCCTATGATTGTTGTCGGGGGATGCCAGTGGAAACTGCTGCCGCACAGATTGTGAAAGAAGCAGTTCAGTCAAAGGGACTTCGAGATGATACTACATGTATTGTGATTGACGTATTTCCAAGGGAGAAACCATCTACTGCTTTGCCACCACCAAAGAAGCAGGTAAAAGGAATGTTTAAATCAATGTTCCGCAAAAGGTCTTCTGAATCATCTTCTCATTTTGAGAGGGAATATAATGAGCCAGATGTTGTTGAGGAATTATTTGAGGAAGGATCGGCTATGCTGTCAGAAAGGTTAGATTCCAAGTATCCAATCTGCAACATGTTTAAGCTGTTTGTATGTGCAATATGCCAAATTGAGATCCAACCTCGGGAGGGTGTCTCCATATATGCCGGCTCATCTAACCGAGGAAAATTGCGTGCTTGGGATGGACCTTTTCTATGCTTAAGTTGCACAGAGAAGAAAGAAGCTATGGAAGGAAAAAGACCATTTGGAGCGTTGATTGCGATCTTGAAAATGGCCAGTCTTAGAAATTGTTCAGAGTTGACCTTCATCTCGGAAATGGACCCCTCTCGGAGGTTTTCCTCAATTCTCATTGCTTTCATTGAGAATTTGGATCACTTTTTGGATTCCACGAATTCCATTGGGAAATATAGCTCTCTAGTGTTACTATTCAAGGCAGGAGATTGCCAGTTAGAGTTGATTGCTTTTGGATACTGTTTTCTGACACCAGTTTATGATTGA 1509 43.74 MSTRSEHHTVPLSVLLKRELAIEKVERPEIVHGQASQSKKGEDFTLLKTECERVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLAAIPSDLNRDEWVAALPRALVAGFVKTDKDFQAKAQTSGTTVTFMIIEGWVLTVASVGDSRCTLESSEGGIYYLSADHRLESNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSSTGGRVIISSDGVWDALSAETAYDCCRGMPVETAAAQIVKEAVQSKGLRDDTTCIVIDVFPREKPSTALPPPKKQVKGMFKSMFRKRSSESSSHFEREYNEPDVVEELFEEGSAMLSERLDSKYPICNMFKLFVCAICQIEIQPREGVSIYAGSSNRGKLRAWDGPFLCLSCTEKKEAMEGKRPFGALIAILKMASLRNCSELTFISEMDPSRRFSSILIAFIENLDHFLDSTNSIGKYSSLVLLFKAGDCQLELIAFGYCFLTPVYD* 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1044965 1048614 + Chy7G129510.1 Chy07g00121 230132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00121 502 Pfam Protein phosphatase 2C 52 278 IPR001932 -
Chy07g00121 502 SMART PP2C_SIG_2 46 293 IPR001932 -
Chy07g00121 502 CDD PP2Cc 39 293 IPR001932 -
Chy07g00121 502 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 420 - -
Chy07g00121 502 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Chy07g00121 502 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Chy07g00121 502 PANTHER ALPHABET, ISOFORM E-RELATED 2 420 - -
Chy07g00121 502 Gene3D - 31 300 IPR036457 -
Chy07g00121 502 SMART PP2C_4 17 291 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00121 Chy-Chr7:1044965 Chy10g01167 Chy-Chr10:16522126 6.68E-173 dispersed
Chy07g00121 Chy-Chr7:1044965 Chy04g00256 Chy-Chr4:2272719 2.28E-21 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00121 - - bhj:120085570 866.3