Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00141 ATGAAAAATGGGCCTAGTCCATGGTCGAAAAACTTCGGCTCGGCCCAGTCCATTATTAATTTATTTTCGACGAAATTGGATTGTATTGAAGTTGGTTCGTTCGGCAATTCTGCTCACCCTATTCAACTCCTTCCCGCCGCCGTCTCCTTCGGGGCTAAATTTCGTTGTGGTTGCCGCGCTGTTTTTCATCCATCACACCGCCATAAAAATATTCAAACCAAATTGAAAACTGAAACCCTCTTCTCAAGCTCTCAACTCACAATGGTGCTACTCGTCGCATCCTCGTCTATTGATTCAGGGATTGGTTGCTGGGACCTCCATACCGGCTCAGAACAACTGCGTTACAAGTCTTGTGCTTCTCCACCACATGGTCTTGTTTGTGTAGGTGGAAAGTTTCTCGCATGCTCTCAGCTTCGCGATCCTGCAGCCACTGCTGGCTCCGTTCTCTACTGGTCTTGGTTTAAGCCTCAAGTTGAAGTTAAGAGTTTTCCGGCTGAACCAATAATGGCCTTGGCTTCCAACCATGAGGGTACTTATATTGTTGGTGGTGGTTTCTCTGGAGATATATACTTATGGGAGGTTTTGAGTGGTAGACTGCTTACAAAATGGCATGCTCATTATAGGGCAGTTACTTGCCTTGTATTCTCTGAGGATGACTCCCTGTTAGTTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCTCTTATAACGGTTTTTGATGATGGTTGGCAAAGGGAAGCAAAACATTTGTATGAGCATAGTTTCACTGGGCATAATCTGCCTGTTACTGACATTGTTGTTGGCTATGGAGGATTCAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTGTGGAGCTTATCGAAGGGGAAGTTGTTAAGAAATATCATATTTCCTTCAATCATTGATGCCATTGCTTTGGATCCTGGTGAACATGTCTTTTATGGTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCATCCAGCAGTGACTACGGATTGCATATACTCGGGTCAATATCAAATCAAAGCAAGTCAGTTACTTCCTTGGCATACTGCTCAAGTGGTAATTTGTTGATCTCTGGATCTGAGGATGGAGCAATTAGAGTTTGGGATACAAGAACCAATAACGTTATTCGTGTTTTCAGACATTCCAAAGGTCCTGTAAATAATATACTTGTTCAACAACAGCCCCTCCCTAAATCACAGTCAACTTCCCAAGGTTCTTTGAGAAAGCACCGACCACTCTTACCTCCTGCTCTCGCAAAATTTGAAAACTCTAAGGACGAGGATGAATACACTGGTGTTATCATTGATCCATCAGGTCCTCCCAAGGAATCTACGGGGTTTTCTTTCCTTAGTTCTCACGTTATGGATGATCAAATCACAGAACTTCAGCAACAGGGTTCTGCTGCCACAGGAATGGAGTTGGAAAGACTTAAGCATGATTATGGAAAATCCAAGCAAATGTTACAACACTGGAGAAAAATTTTGGACTGCACCGAGATTTTAGGACTCAAGAAACAGAACGATGCATGCACTATAGAAAGAGAGGAGTTAAGAAAAAAGGCCATTTTTCTTCAGTTCATCAACGTCGGAGATTCCTTTTTCTTTAATCCTATGGAAAATGATGATTTAAAATCGGAAGATCAGATGGAGATTATGATGATGATGCAACAAATGGAAAAAATCCCTGAATTTTACAATGATTTCTCACCGCCATCCTCTGATTTCAGCTCAACTACGACCGATCACCCACATTGCCATTTGGATTCCTCTTCATCGCCTCCATTATTCATCAACAACAACAGTAACAACAGCAACAGCAACAACAACAACCCACCTTATAATTTCCCCCAACAATCTACTGTTCCATTCCCGGGAACCTCCAGTTCACGGTGGCGAAACTCCGGTAGTTGTGAAACAGAGAGTTTGCAGAAACAGAGGTCGGTAGCGGCTATGAGGGAGATGATATTCAGAATAGCAGTGATGCAACCAATTCACATAGACCCAGAAGCCGTGAAGCCACCAAAAAGAAGAAACGTGAAGATTTCAACTGACCCACAAAGTGTAGCGGCTCGACATAGGAGAGAAAGAATTAGCGAAAGAATTAGAATACTTCAAAGATTAGTCCCTGGAGGTACTAAAATGGACACTGCTTCTATGTTGGATGAAGCTATTCATTATGTTAAATTCTTAAAAACCCAAGTTCAGTCTCTTGAAAGAGCCGCCGGGAACCGCCCAATCACCGGTGGTGGTGCACCCAGTAGCGTTGGGTTCCCTTTGGAAATGTCAACGGGAAGTTACATCCCTAATCATCATCAATCCCAACCTTGA 2367 43.09 MKNGPSPWSKNFGSAQSIINLFSTKLDCIEVGSFGNSAHPIQLLPAAVSFGAKFRCGCRAVFHPSHRHKNIQTKLKTETLFSSSQLTMVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSVLYWSWFKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLTKWHAHYRAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKGPVNNILVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGVIIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRKILDCTEILGLKKQNDACTIEREELRKKAIFLQFINVGDSFFFNPMENDDLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDHPHCHLDSSSSPPLFINNNSNNSNSNNNNPPYNFPQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAGNRPITGGGAPSSVGFPLEMSTGSYIPNHHQSQP* 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1201275 1208892 - Chy7G129710.1 Chy07g00141 230152

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00141 788 Gene3D - 302 408 IPR015943 GO:0005515
Chy07g00141 788 Pfam WD domain, G-beta repeat 349 382 IPR001680 GO:0005515
Chy07g00141 788 Pfam WD domain, G-beta repeat 198 235 IPR001680 GO:0005515
Chy07g00141 788 Pfam WD domain, G-beta repeat 254 290 IPR001680 GO:0005515
Chy07g00141 788 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 694 743 IPR011598 GO:0046983
Chy07g00141 788 PANTHER WD-REPEAT PROTEIN 18 89 508 IPR045227 -
Chy07g00141 788 MobiDBLite consensus disorder prediction 582 656 - -
Chy07g00141 788 ProSiteProfiles Trp-Asp (WD) repeats profile. 256 299 IPR001680 GO:0005515
Chy07g00141 788 Coils Coil 513 533 - -
Chy07g00141 788 SMART finulus 700 749 IPR011598 GO:0046983
Chy07g00141 788 ProSiteProfiles Trp-Asp (WD) repeats profile. 203 236 IPR001680 GO:0005515
Chy07g00141 788 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 699 752 IPR036638 GO:0046983
Chy07g00141 788 Gene3D - 697 757 IPR036638 GO:0046983
Chy07g00141 788 MobiDBLite consensus disorder prediction 755 788 - -
Chy07g00141 788 ProSiteProfiles Trp-Asp (WD) repeats profile. 350 391 IPR001680 GO:0005515
Chy07g00141 788 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 350 385 - -
Chy07g00141 788 CDD WD40 91 382 - -
Chy07g00141 788 CDD bHLH_AtIND_like 695 751 - -
Chy07g00141 788 Gene3D - 65 301 IPR015943 GO:0005515
Chy07g00141 788 SMART WD40_4 196 235 IPR001680 GO:0005515
Chy07g00141 788 SMART WD40_4 249 290 IPR001680 GO:0005515
Chy07g00141 788 SMART WD40_4 156 193 IPR001680 GO:0005515
Chy07g00141 788 SMART WD40_4 343 382 IPR001680 GO:0005515
Chy07g00141 788 SMART WD40_4 293 331 IPR001680 GO:0005515
Chy07g00141 788 Pfam Helix-loop-helix DNA-binding domain 704 743 IPR011598 GO:0046983
Chy07g00141 788 SUPERFAMILY WD40 repeat-like 92 403 IPR036322 GO:0005515
Chy07g00141 788 ProSitePatterns Trp-Asp (WD) repeats signature. 369 383 IPR019775 -
Chy07g00141 788 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 203 236 - -
Chy07g00141 788 PANTHER WD REPEAT-CONTAINING PROTEIN 18 89 508 - -
Chy07g00141 788 PRINTS G protein beta WD-40 repeat signature 277 291 IPR020472 -
Chy07g00141 788 PRINTS G protein beta WD-40 repeat signature 222 236 IPR020472 -
Chy07g00141 788 PRINTS G protein beta WD-40 repeat signature 369 383 IPR020472 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00141 K14829 IPI3; pre-rRNA-processing protein IPI3 - csv:101204364 961.059
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00141 Chy-Chr7:1201275 Chy08g00620 Chy-Chr8:14033872 8.38E-25 dispersed
Chy02g01048 Chy-Chr2:7186730 Chy07g00141 Chy-Chr7:1201275 4.61E-35 transposed
Chy04g00200 Chy-Chr4:1768336 Chy07g00141 Chy-Chr7:1201275 1.84E-07 transposed
Chy04g01129 Chy-Chr4:17455304 Chy07g00141 Chy-Chr7:1201275 2.93E-08 transposed
Chy07g00977 Chy-Chr7:14398977 Chy07g00141 Chy-Chr7:1201275 4.14E-44 transposed
Chy11g00181 Chy-Chr11:1770895 Chy07g00141 Chy-Chr7:1201275 1.92E-42 transposed
Chy12g01177 Chy-Chr12:16628998 Chy07g00141 Chy-Chr7:1201275 6.27E-53 transposed
Chy03g01551 Chy-Chr3:17678636 Chy07g00141 Chy-Chr7:1201275 9.78E-41 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g753 Blo01g01526 . Bda01g00570 . Bpe02g00431 . . Bma01g02270 . . . . . . . Cpe06g00165 . . . . . . . . . . . . . . . . . . . Lsi04g01549 Csa04g02420 . . . . . . . . . . Sed09g0365 . Cmo09g00230 . . . . . Cpe02g00186 Bhi09g03308 Tan01g4765 Cmetu07g1918 . Hepe01g1773 Mch11g0299 . Cla05g02050 Cam05g2202 Cec05g2219 . Clacu05g2194 Cmu05g2060 . . . Chy07g00141 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy03g00734 . 1 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 51.5 1.6e-79 293.1
Chy06g00483 . 212 390 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 58.7 1.0e-40 164.1
Chy04g01011 . 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 66.8 4.1e-59 224.9
Chy04g01015 . 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 66.0 4.5e-58 221.5
Chy11g00586 . 5 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 56.1 1.1e-43 173.7
Chy12g01019 . 54 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 58.4 4.7e-39 158.3
Chy04g01408 . 69 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 66.0 1.1e-57 220.3
Chy12g01144 . 51 523 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 50.2 2.1e-102 369.8
Chy02g00573 . 52 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 57.8 2.0e-45 179.9
Chy02g00358 . 212 403 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 50.2 3.2e-40 162.9
Chy07g01408 . 112 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43140 56.7 7.3e-56 214.5
Chy06g00092 . 1 579 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 52.5 1.3e-149 526.9
Chy01g00128 . 152 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43175 61.5 7.6e-39 157.5
Chy11g01580 . 81 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 60.8 6.9e-43 171.0
Chy06g00764 . 41 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 54.5 2.1e-39 159.5
Chy11g01580 . 79 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.9 4.1e-45 178.3
Chy06g00764 . 41 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 51.5 1.3e-38 156.8
Chy07g01499 . 23 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 58.8 2.9e-43 171.8
Chy07g01499 . 21 154 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 68.1 1.5e-41 166.0
Chy02g00903 . 129 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 59.0 8.5e-43 171.4
Chy02g02257 . 21 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29930 50.5 3.5e-43 172.2
Chy10g01113 . 12 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 56.0 6.4e-59 224.9
Chy03g00988 . 24 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.8 4.3e-49 192.2
Chy02g02535 . 19 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.5 2.7e-43 172.9
Chy06g00829 . 244 437 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 50.5 2.6e-38 156.4
Chy06g00483 . 212 390 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23210 57.8 1.1e-37 154.1
Chy02g02257 . 21 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 61.7 1.0e-51 200.3
Chy05g00866 . 1 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 52.5 4.8e-49 191.4
Chy07g00141 . 566 769 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 53.3 8.2e-44 174.1
Chy11g00181 . 50 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 71.3 8.4e-41 164.1
Chy03g01551 . 89 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 75.5 1.3e-36 150.2
Chy02g01048 . 73 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 76.0 1.1e-36 150.2
Chy02g01048 . 78 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 9.7e-42 167.2
Chy02g02357 CCT,ECH 90 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 67.3 1.3e-44 176.8
Chy12g01438 CCT,ECH 111 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 68.4 1.1e-41 167.2
Chy06g00612 . 3 156 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 61.2 1.5e-41 166.4
Chy04g01755 . 22 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42300 52.0 2.7e-44 175.6
Chy07g00212 . 215 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 54.4 6.3e-46 182.2
Chy04g00093 CCT 61 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 51.8 1.6e-147 520.0
Chy06g02143 CCT 66 650 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 53.0 3.5e-147 518.8
Chy02g02357 CCT,ECH 9 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 50.9 1.2e-48 190.3
Chy12g01438 CCT,ECH 114 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 70.2 8.9e-47 184.1
Chy07g00184 . 232 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 82.3 3.4e-38 155.6
Chy03g01587 . 235 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 81.3 3.7e-37 152.1
Chy07g01715 . 245 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 79.3 1.4e-36 150.2
Chy01g00774 . 181 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 76.5 3.0e-38 156.0
Chy01g01540 . 71 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.2 1.7e-95 345.9
Chy02g02104 . 152 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 55.0 7.9e-45 177.6
Chy05g01238 . 192 376 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 57.9 2.4e-41 166.0
Chy06g02143 CCT 1 650 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.7 6.4e-168 587.8
Chy04g00093 CCT 1 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 53.8 6.0e-166 581.3
Chy04g01755 . 1 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 54.0 7.5e-79 291.2
Chy02g00781 . 146 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 61.9 2.6e-61 232.6
Chy03g01286 CCT 162 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 64.8 1.3e-55 213.8
Chy04g00184 CCT 150 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 62.4 3.7e-55 212.2
Chy01g00774 . 187 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 85.3 1.4e-39 161.0
Chy09g00423 . 334 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 81.4 1.9e-38 157.1
Chy10g01083 . 362 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 80.4 9.7e-38 154.8
Chy01g00774 . 174 370 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 51.7 2.2e-42 169.9
Chy06g00829 . 335 441 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 74.3 2.0e-38 156.8
Chy11g00377 . 138 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 71.0 2.8e-37 152.9
Chy10g01083 . 363 455 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 1.1e-36 151.0
Chy01g00774 . 172 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G18300 79.2 6.2e-38 155.2
Chy02g02104 . 199 419 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.8 2.0e-64 242.7
Chy05g01238 . 207 419 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 64.6 2.4e-62 235.7
Chy01g01540 . 136 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 58.2 1.1e-43 173.7
Chy02g01841 . 18 157 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 64.3 7.9e-38 154.8
Chy02g02104 . 201 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 60.4 7.6e-57 218.0
Chy05g01238 . 213 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 65.2 1.4e-55 213.8
Chy01g01540 . 147 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.8 6.3e-43 171.8
Chy01g01540 . 1 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 58.6 2.7e-88 322.4
Chy02g02104 . 152 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 51.1 1.9e-41 166.8
Chy05g01238 . 213 390 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 55.4 1.3e-39 160.6
Chy10g01083 . 353 556 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 52.7 5.8e-44 175.3
Chy09g00423 . 325 534 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 51.9 2.7e-41 166.4
Chy02g02357 CCT,ECH 133 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 62.6 3.2e-37 152.1
Chy06g00829 . 331 469 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G26260 62.0 4.3e-37 152.5
Chy01g01416 . 259 463 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.9 4.5e-44 175.6
Chy09g00423 . 325 509 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 53.8 1.4e-40 164.1
Chy10g01083 . 356 538 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.1 4.4e-39 159.1
Chy01g00774 . 174 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 65.0 2.2e-38 156.8
Chy10g01083 . 356 506 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 59.7 6.1e-38 155.6
Chy01g00774 . 176 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 75.7 1.0e-37 154.8
Chy09g00423 . 321 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 71.6 3.9e-37 152.9
Chy02g02535 . 1 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 55.6 7.5e-68 254.2
Chy09g00009 . 577 782 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 51.6 1.6e-47 186.4
Chy09g00009 . 600 782 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 54.8 3.4e-46 182.2
Chy02g02104 . 165 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 63.8 3.7e-57 218.8
Chy05g01238 . 201 375 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 67.8 3.3e-53 205.7
Chy01g01540 . 129 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 54.0 5.2e-43 171.8
Chy09g00499 . 128 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 68.4 5.8e-42 168.3
Chy07g01715 . 211 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 66.9 6.8e-39 158.3
Chy01g00128 . 181 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 67.4 2.0e-38 156.8
Chy07g00184 . 236 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 78.8 6.4e-37 151.8
Chy07g01715 . 244 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 93.1 2.4e-39 159.8
Chy07g00184 . 236 319 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 95.2 9.2e-39 157.9
Chy01g00128 . 205 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 90.0 2.1e-38 156.8
Chy03g01587 . 235 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 88.5 7.8e-38 154.8
Chy09g00499 . 65 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 51.3 1.3e-41 167.2
Chy07g00141 . 660 754 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 92.6 2.6e-42 169.1
Chy11g00181 . 76 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 86.3 1.1e-40 163.7
Chy03g01551 . 103 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 87.5 4.3e-37 151.8
Chy04g00104 . 95 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 52.3 4.8e-42 168.7
Chy03g01342 . 2 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 50.9 1.2e-50 197.2
Chy05g01131 . 103 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 54.1 1.2e-45 180.6
Chy06g00371 . 48 368 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.0 9.7e-93 337.4
Chy04g00093 CCT 61 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 51.8 1.6e-147 520.0
Chy06g02143 CCT 66 650 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 53.0 3.5e-147 518.8
Chy06g02143 CCT 1 650 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.7 6.4e-168 587.8
Chy04g00093 CCT 1 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 53.8 6.0e-166 581.3
Chy01g01540 . 1 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 58.6 2.7e-88 322.4
Chy02g02104 . 152 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 51.1 1.9e-41 166.8
Chy05g01238 . 213 390 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 55.4 1.3e-39 160.6
Chy06g00092 . 1 579 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 52.5 1.3e-149 526.9
Chy02g00903 . 129 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 59.0 8.5e-43 171.4
Chy02g02257 . 21 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29930 50.5 3.5e-43 172.2
Chy10g01113 . 12 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 56.0 6.4e-59 224.9
Chy03g00988 . 24 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.8 4.3e-49 192.2
Chy02g02535 . 19 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.5 2.7e-43 172.9
Chy06g00829 . 244 437 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 50.5 2.6e-38 156.4
Chy06g00483 . 212 390 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23210 57.8 1.1e-37 154.1
Chy02g02257 . 21 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 61.7 1.0e-51 200.3
Chy05g00866 . 1 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 52.5 4.8e-49 191.4
Chy07g00141 . 566 769 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 53.3 8.2e-44 174.1
Chy11g00181 . 50 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 71.3 8.4e-41 164.1
Chy03g01551 . 89 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 75.5 1.3e-36 150.2
Chy02g01048 . 73 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 76.0 1.1e-36 150.2
Chy02g01048 . 78 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 9.7e-42 167.2
Chy02g02357 CCT,ECH 90 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 67.3 1.3e-44 176.8
Chy12g01438 CCT,ECH 111 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 68.4 1.1e-41 167.2
Chy06g00612 . 3 156 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 61.2 1.5e-41 166.4
Chy04g01755 . 22 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42300 52.0 2.7e-44 175.6
Chy07g00212 . 215 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 54.4 6.3e-46 182.2
Chy02g02357 CCT,ECH 9 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 50.9 1.2e-48 190.3
Chy12g01438 CCT,ECH 114 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 70.2 8.9e-47 184.1
Chy07g00184 . 232 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 82.3 3.4e-38 155.6
Chy03g01587 . 235 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 81.3 3.7e-37 152.1
Chy07g01715 . 245 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 79.3 1.4e-36 150.2
Chy01g00774 . 181 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 76.5 3.0e-38 156.0
Chy01g01540 . 71 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.2 1.7e-95 345.9
Chy02g02104 . 152 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 55.0 7.9e-45 177.6
Chy05g01238 . 192 376 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 57.9 2.4e-41 166.0
Chy04g01755 . 1 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 54.0 7.5e-79 291.2
Chy02g00781 . 146 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 61.9 2.6e-61 232.6
Chy03g01286 CCT 162 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 64.8 1.3e-55 213.8
Chy04g00184 CCT 150 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 62.4 3.7e-55 212.2
Chy01g00774 . 187 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 85.3 1.4e-39 161.0
Chy09g00423 . 334 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 81.4 1.9e-38 157.1
Chy10g01083 . 362 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 80.4 9.7e-38 154.8
Chy01g00774 . 174 370 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 51.7 2.2e-42 169.9
Chy06g00829 . 335 441 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 74.3 2.0e-38 156.8
Chy11g00377 . 138 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 71.0 2.8e-37 152.9
Chy10g01083 . 363 455 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 1.1e-36 151.0
Chy01g00774 . 172 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G18300 79.2 6.2e-38 155.2
Chy02g02104 . 199 419 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.8 2.0e-64 242.7
Chy05g01238 . 207 419 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 64.6 2.4e-62 235.7
Chy01g01540 . 136 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 58.2 1.1e-43 173.7
Chy02g01841 . 18 157 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 64.3 7.9e-38 154.8
Chy02g02104 . 201 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 60.4 7.6e-57 218.0
Chy05g01238 . 213 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 65.2 1.4e-55 213.8
Chy01g01540 . 147 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.8 6.3e-43 171.8
Chy10g01083 . 353 556 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 52.7 5.8e-44 175.3
Chy09g00423 . 325 534 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 51.9 2.7e-41 166.4
Chy02g02357 CCT,ECH 133 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 62.6 3.2e-37 152.1
Chy06g00829 . 331 469 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G26260 62.0 4.3e-37 152.5
Chy01g01416 . 259 463 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.9 4.5e-44 175.6
Chy09g00423 . 325 509 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 53.8 1.4e-40 164.1
Chy10g01083 . 356 538 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.1 4.4e-39 159.1
Chy01g00774 . 174 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 65.0 2.2e-38 156.8
Chy10g01083 . 356 506 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 59.7 6.1e-38 155.6
Chy01g00774 . 176 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 75.7 1.0e-37 154.8
Chy09g00423 . 321 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 71.6 3.9e-37 152.9
Chy02g02535 . 1 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 55.6 7.5e-68 254.2
Chy09g00009 . 577 782 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 51.6 1.6e-47 186.4
Chy09g00009 . 600 782 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 54.8 3.4e-46 182.2
Chy02g02104 . 165 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 63.8 3.7e-57 218.8
Chy05g01238 . 201 375 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 67.8 3.3e-53 205.7
Chy01g01540 . 129 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 54.0 5.2e-43 171.8
Chy09g00499 . 128 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 68.4 5.8e-42 168.3
Chy07g01715 . 211 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 66.9 6.8e-39 158.3
Chy01g00128 . 181 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 67.4 2.0e-38 156.8
Chy07g00184 . 236 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 78.8 6.4e-37 151.8
Chy07g01715 . 244 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 93.1 2.4e-39 159.8
Chy07g00184 . 236 319 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 95.2 9.2e-39 157.9
Chy01g00128 . 205 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 90.0 2.1e-38 156.8
Chy03g01587 . 235 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 88.5 7.8e-38 154.8
Chy09g00499 . 65 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 51.3 1.3e-41 167.2
Chy07g00141 . 660 754 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 92.6 2.6e-42 169.1
Chy11g00181 . 76 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 86.3 1.1e-40 163.7
Chy03g01551 . 103 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 87.5 4.3e-37 151.8
Chy04g00104 . 95 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 52.3 4.8e-42 168.7
Chy03g01342 . 2 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 50.9 1.2e-50 197.2
Chy05g01131 . 103 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 54.1 1.2e-45 180.6
Chy06g00371 . 48 368 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.0 9.7e-93 337.4
Chy03g00734 . 1 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 51.5 1.6e-79 293.1
Chy06g00483 . 212 390 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 58.7 1.0e-40 164.1
Chy04g01011 . 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 66.8 4.1e-59 224.9
Chy04g01015 . 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 66.0 4.5e-58 221.5
Chy11g00586 . 5 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 56.1 1.1e-43 173.7
Chy12g01019 . 54 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 58.4 4.7e-39 158.3
Chy04g01408 . 69 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 66.0 1.1e-57 220.3
Chy12g01144 . 51 523 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 50.2 2.1e-102 369.8
Chy02g00573 . 52 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 57.8 2.0e-45 179.9
Chy02g00358 . 212 403 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 50.2 3.2e-40 162.9
Chy07g01408 . 112 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43140 56.7 7.3e-56 214.5
Chy01g00128 . 152 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43175 61.5 7.6e-39 157.5
Chy11g01580 . 81 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 60.8 6.9e-43 171.0
Chy06g00764 . 41 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 54.5 2.1e-39 159.5
Chy11g01580 . 79 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.9 4.1e-45 178.3
Chy06g00764 . 41 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 51.5 1.3e-38 156.8
Chy07g01499 . 23 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 58.8 2.9e-43 171.8
Chy07g01499 . 21 154 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 68.1 1.5e-41 166.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003200 1 2 2 1 1 1 1 1 1 1 1 1 2 1 2 3 1 2 2 1 1 1 2 1 2 1 3 2 8 1 50
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18256 PF00010 HLH 8.00E-06 No_clan Chy TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy07g00141 Chy_Chr07 FPKM 4.629373 4.849192 5.925702 5.571784 7.826251 7.265245 8.980945 6.788686 7.123656 7.303604