Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00154 ATGAATAACACGAATTTCGTCTCTAATCCTATGCTTCCTCTCCCATTACTACCTTCTTCATCTCAGTTGCTGTTTTCCAATAACGCCATTGATTTCAAGCACAGGATCTCCATTGTTGTAAAACCCACTTTTCGGGGTTCGTGTAGATGGAGGATCCGAGCCACTGCCGAAAATGGAGCTTCATCGGCGTCGACTTCGCAGATCGATATGGTGAAGAACAGAGAGGGGATTTTCACCGCCAAACAAAGCAAGGTTGTTGTCCTTTGGGACCTTGATAACAAACCCCCTCGTGGGCCGCCGTATGAGGCGGCTATGGCGCTGAAACGAGTGGCGCAACGCTTCGGCCAAGTGGTCGACATGTCAGCTTACGCTAATCGCCATGCCTTTATCCATTTGCCGCAGTGGGTTGTTGAAGAACGCAGCGAGCGTCGGCAATTGGACATTCTTGAGCGCAAAGGGTTGTTCACGCCGTCCGAATCATACGTCTGCGGGGTTTGCGGTCGAAAGTGCAAAACAAACCTAGACCTTAAGAAGCATTTCAAGCAACTTCACGAACGGGAGCGCCAGAAGAAATTGAACAGAATGAGGTCCCTCAAGGGCAAGAAGCGACAGCGTTATAAGGAAAGGTTCGTATCTGGAAACCATAAGTACAATGAAGCAGCGAGGTCTGTGATCACCCCCAAAGTTGGATATGGGTTGGCCTCAGAATTGAGACGTGCTGGGGTTTTTGTAAAAACAGTAGAGGATAAGCCTCAGGCAGCTGATTGGGCCTTGAAGAAACAGATGCAACACTCGATGAGTCGTGGTATTGATTGGATGTTTCTTGTTTCTGATGATTCAGATTTCTCAGAGATGTTAAGGAAGGCTAAGGAAGCTAATTTGGGAACTGTGGTGGTGGGAGATCGTGATAGGGCATTGGGTAGGCACGCAGATTTATGGGTTCCATGGATGGGGGTTGAAAATGGGGATGTTACAGAGGAGGATTTGGTGCCTAAAAAATGGAGGATGAGGAGAAGAGACAAGGAAGTGGATGAAGGTGATGATGGCTTTTCAGTTTCTAGTTTCTATGGAGACATTGCTTGTAGTGATTTGGAGAGTGTAGTGGAAGAGCTTGCTTCCACAAGTACAGAGTTCAATGGGTTAAGAATTTCTGCATTTTCAGAGGGAGAAGATGATGAAGAAGAAGACGATGATTGGGTTGAAGAGGATGTTGCACCTGACTATCTGCTAGTGATGAGTGACGAGGAAGATGGGTATTTTTGA 1263 47.03 MNNTNFVSNPMLPLPLLPSSSQLLFSNNAIDFKHRISIVVKPTFRGSCRWRIRATAENGASSASTSQIDMVKNREGIFTAKQSKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERSERRQLDILERKGLFTPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKERFVSGNHKYNEAARSVITPKVGYGLASELRRAGVFVKTVEDKPQAADWALKKQMQHSMSRGIDWMFLVSDDSDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENGDVTEEDLVPKKWRMRRRDKEVDEGDDGFSVSSFYGDIACSDLESVVEELASTSTEFNGLRISAFSEGEDDEEEDDDWVEEDVAPDYLLVMSDEEDGYF* 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1309088 1310350 + Chy7G129840.1 Chy07g00154 230165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00154 420 ProSiteProfiles Zinc finger C2H2 type domain profile. 161 189 IPR013087 -
Chy07g00154 420 CDD PIN_LabA-like 171 301 - -
Chy07g00154 420 ProSitePatterns Zinc finger C2H2 type domain signature. 163 184 IPR013087 -
Chy07g00154 420 PANTHER - 53 390 - -
Chy07g00154 420 Coils Coil 181 201 - -
Chy07g00154 420 PANTHER OS06G0166200 PROTEIN 53 390 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g02009 Chy-Chr6:24043618 Chy07g00154 Chy-Chr7:1309088 5.75E-73 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18260 None None None None Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00154 - - csv:101206044 785.793