Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g00155 ATGGAAGGAGAAGTTTGTTCTGTAAATTCATCCTCCCCAAAGAGGAAGCAACGGCATGATCAGAATCATCTCCAACAAGAAAAGCCTTACAGAGGAATACGTATGAGGAAGTGGGGAAAGTGGGTTGCGGAAATCAGAGAACCCAACAAACGCTCCAGGATTTGGCTTGGTTCATACACAACCCCCGTCGCCGCCGCTAGAGCTTACGACACCGCCGTCTTCTATCTCCGTGGCCCCACTGCTCGACTTAACTTCCCGGATTTGATGTTCGAAACCGATCAGCTTCACGACATGTCGGCCGCCTCCATACGCAAACGAGCCACCGAAGTCGGCGCTAGGGTTGACGCCATCCAGACCTCTCTCCACGCCTCTAATTCCGCCGGTACTCAAATTTCCGATAAGCCCGATTTAAACGAATACCCCAACCCTGAAACCTCAGACGACGATTAA 450 51.56 MEGEVCSVNSSSPKRKQRHDQNHLQQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPTARLNFPDLMFETDQLHDMSAASIRKRATEVGARVDAIQTSLHASNSAGTQISDKPDLNEYPNPETSDDD* 150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1318631 1319080 + Chy7G129850.1 Chy07g00155 230166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g00155 149 CDD AP2 30 88 IPR001471 GO:0003700|GO:0006355
Chy07g00155 149 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 10 147 - -
Chy07g00155 149 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Chy07g00155 149 PRINTS Ethylene responsive element binding protein signature 68 88 IPR001471 GO:0003700|GO:0006355
Chy07g00155 149 MobiDBLite consensus disorder prediction 121 136 - -
Chy07g00155 149 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 10 147 - -
Chy07g00155 149 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Chy07g00155 149 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Chy07g00155 149 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Chy07g00155 149 Pfam AP2 domain 30 78 IPR001471 GO:0003700|GO:0006355
Chy07g00155 149 MobiDBLite consensus disorder prediction 121 149 - -
Chy07g00155 149 MobiDBLite consensus disorder prediction 13 29 - -
Chy07g00155 149 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Chy07g00155 149 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00900 Chy-Chr2:5816503 Chy07g00155 Chy-Chr7:1318631 2.60E-55 dispersed
Chy03g00645 Chy-Chr3:8976073 Chy07g00155 Chy-Chr7:1318631 2.07E-27 dispersed
Chy07g00155 Chy-Chr7:1318631 Chy11g00230 Chy-Chr11:2160560 1.86E-47 dispersed
Chy03g01559 Chy-Chr3:17756196 Chy07g00155 Chy-Chr7:1318631 5.75E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18261 PF00847 AP2 2.20E-11 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g00155 K09286 - csv:101219005 306.605